BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476915
Length=3016
Score E
Sequences producing significant alignments: (Bits) Value
AT1G77500.1 | Symbols: | Protein of unknown function (DUF630 a... 4146 0.0
AT1G21740.1 | Symbols: | Protein of unknown function (DUF630 a... 1081 0.0
> AT1G77500.1 | Symbols: | Protein of unknown function (DUF630
and DUF632) | chr1:29121489-29125191 FORWARD LENGTH=3158
Length=3158
Score = 4146 bits (2245), Expect = 0.0
Identities = 2750/2981 (92%), Gaps = 86/2981 (3%)
Strand=Plus/Plus
Query 74 ACTTTGCTCTGTTTCTTCaaaaaaaaaaaaaGGTAAACTTTGCTCTGTTCCTTCCATGTC 133
|||||||||||||||||| || ||||||| || |||||||||||||||| ||||||||
Sbjct 148 ACTTTGCTCTGTTTCTTC---AACAAAAAAA-GTGAACTTTGCTCTGTTCCGTCCATGTC 203
Query 134 CGATGATGATCGGAGTGGAAGAAGAATGAGATTTGAAACAAACGTCTAGAGTTCCGACGA 193
||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | |
Sbjct 204 CGATGATGATCGGAGTGGAAGCAGAATGAGATTTGAAGCAAACGTCTAGAGTT-C--C-- 258
Query 194 AGACGTTATGGGTTGCGGAGGATCAAAAGTAGATAATCAACCAATTGTGATTCTCTGTAG 253
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 259 -GACGTTATGGGTTGCGGAGGATCAAAAGTAGATAATCAACCAATAGTGATTCTCTGTAG 317
Query 254 AGAACGGAAGGAACTGATTAAAGCGGCGTCGTATAATCGCTCTGCTCTCGCCGTCGCTCA 313
|||||| ||||| ||| ||||||||||||||||| |||| ||||||||||| ||||||||
Sbjct 318 AGAACGAAAGGAGCTGCTTAAAGCGGCGTCGTATCATCGTTCTGCTCTCGCTGTCGCTCA 377
Query 314 CCTAACTTACTTCCAGTCTCTCTCCGACGTCGGCGAAGCTATTCAACGTTTCGTTGACGA 373
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 378 CCTAACTTACTTCCAGTCTCTCTCCGACGTCGGTGAAGCTATTCAACGTTTCGTTGACGA 437
Query 374 AGAAGTCGCAGCTGGTTTTTCGTCGTCTTCTTCGCCGGATTCTCCAGTTCTTACACTTCC 433
||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 438 CGAAGTCGTAGCTGGTTTTTCTTCTTCTTCTTCGCCGGATTCTCCAGTTCTTACACTTCC 497
Query 434 GTCCGACGAA-GGAAAGCCGAAGAAACACAAGAGGATCTCTCCTTCTTCAACCACCTCGA 492
|||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||| |
Sbjct 498 GTCCGACGAAGGGAAA-CCGACGAAACACAAGAGGATTTCTCCTTCTTCAACCACCTCAA 556
Query 493 TTTCTCATTCCGTCATCGAAGAAGAAGATAC---TGATGATTCTCATTTGCATCTAAGTT 549
|||||||||||||||||||||||||||| || ||||||||| |||||||||||||| |
Sbjct 557 TTTCTCATTCCGTCATCGAAGAAGAAGACACTGATGATGATTCGCATTTGCATCTAAGCT 616
Query 550 CCGGATCTGAATCCGAACCCGAATCAGAAGCTGGATCTAAGAATCATATCCAAATTACTA 609
|| | | ||||||| |||||||||||| |||||||||| |||||||||||| | ||
Sbjct 617 CC-G----G-ATCCGAATCCGAATCAGAAGTTGGATCTAAGGATCATATCCAAA-T--TA 667
Query 610 CTAGCAGTCCAGAACCAGAACGGTCAACGGAAACATTTCCGTCCGG-T-T-ATCCAACAA 666
|||||| |||||||| ||| |||||||||||| ||||||| ||||| | | |||||||||
Sbjct 668 CTAGCACTCCAGAACAAGAGCGGTCAACGGAATCATTTCCTTCCGGTTATCATCCAACAA 727
Query 667 ACTATGCTCCACCGATTTACCCAGCC-GGTTATCCACTCACTTACCCGCCCGGTTATTC- 724
|||||||||||||| |||||||| || |||||||||| | |||||| | |||| |
Sbjct 728 ACTATGCTCCACCGGTTTACCCA-CCTGGTTATCCACCCGGTTACCCATTCAGTTACCCG 786
Query 725 ACAGGGTTATCCGTCGGG---TTATCCACCGGGTTACCCGAATTTCAGTGGTGAGAATCC 781
|| |||||| | ||||| ||||| ||||||||||||||||| || |||||||||||
Sbjct 787 AC-CGGTTATTCATCGGGTAATTATCAACCGGGTTACCCGAATTACACAGGTGAGAATCC 845
Query 782 ATACGCAAATCGAGGCATGTATTTCATGAAGAAATCAGCGCCACAATCACGACCGTTCAT 841
||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 846 ATACGGAAATCGAGGAATGTATTACATGAAGAAATCTGCGCCACAATCACGACCGTTCAT 905
Query 842 CTTCCAACCGGAGAATCATCGAGT---GGAGAACGCGCAATGGTCGTCGGATTCTGGATT 898
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 906 TTTCCAACCGGAGAATCATCGAGTGGAGGAGAACGCGCAATGGCCGTCGGATTCTGGATT 965
Query 899 TGGAAACACAGGAGTGCAACGGAGATCGCCTTCTCCGTTACCTCCTCCGTCACCGCCTAC 958
| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 966 TAGAAACACAGGAGTGCAACGGAGATCGCCGTCTCCGTTACCTCCTCCGTCACCACCTAC 1025
Query 959 GGTTTCAACTTGGGATTTCTTGAATGTTTTTGATACCTATGATTATAGCAACGCCCGTTC 1018
|||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct 1026 GGTTTCAACTTGGGATTTTTTGAATGTGTTTGATACTTATGATTACAGCAACGCCCGTTC 1085
Query 1019 TCGTGCTTCGGGATATTATCCGATGGGAATGGCGTCAATCTCAAGCAGTCCTGATTCCAA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1086 TCGTGCTTCGGGATATTATCCGATGGGAATGGCGTCAATCTCAAGCAGTCCTGATTCGAA 1145
Query 1079 GGAAGTTAGAGAAAGAGAAGGGATTCCTGAGCTGGAAGAAGTAACAGAGC---AAG---- 1131
||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1146 GGAAGTTAGAGAAAGAGAAGGGATTCCTGAGCTAGAAGAAGTAACAGAGCAAGAAGTTAT 1205
Query 1132 --AGCAAGTGTATAGACGTCCCAAGAGAACAGGATTGGAGAAGGTTAAGGAACACAGAGA 1189
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 1206 CAAGCAAGTGTATAGACGTCCCAAGAGACCAGGATTGGAGAAGGTTAAAGAACACAGAGA 1265
Query 1190 CGAGCACAAGCACAACGTTTTTCCTGAGAGGAACATTAACAAAAGAGAAGAAACTTTGAG 1249
|||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1266 CGAGCACAAGCACAACGTTTTTCCTGAGAGGAACATTAAC----------AAA-----AG 1310
Query 1250 GGAAGTGCCAATGCCAGAACAAGTCACTGAGAGCTCCTTGGATTCAGAGACAATTTCGTC 1309
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1311 GGAAGTTCCAATGCCAGAACAAGTCACTGAGAGCTCATTGGATTCAGAGACAATTTCGTC 1370
Query 1310 GTTTTCAGGAAGTGATGTGGAATCGGAGTTTCACTATGTTAATGGTGGTGAAGG-AA-AG 1367
||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct 1371 TTTTTCAGGAAGTGATGTAGAATCGGAGTTTCACTATGTTAATGGTGGTGAAGGAAAGAG 1430
Query 1368 -AGCAGCATTAGTTCAATCAGTCACGGGACGGGGACAAAGAGCTCGAGAGAAGTAGAAGA 1426
|||||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct 1431 TAGCAGCATCAGTTCAATCAGTCATGGGGCTGGGACAAAGAGCTCGAGAGAAGTAGAAGA 1490
Query 1427 ACAGTATGGGAGGAAGAAAGGAGTGAGCTTTGAGTTGGAGGAGACAACGAGCACTTCGTC 1486
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1491 ACAGTATGGGAGGAAAAAAGGAGTGAGCTTTGAGTTGGAGGAAACAACGAGCACTTCGTC 1550
Query 1487 TTTTGATGTTGAATCTTCCAAGATAAGTAGCTTATCCAGTTTGTCGATCCATGCCACTAG 1546
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1551 TTTTGATGTTGAATCTTCCAAGATAAGTAGCTTATCCAGTTTGTCGATTCATGCCACTAG 1610
Query 1547 GGATCTCAGAGAAGTTGTCAAGGAGATAAAGAGTGAGTTCGAGGTTGCTTCTTCCTGTGG 1606
|||||||||||||||||| |||||||| ||||||||||||||| |||||||||| |||||
Sbjct 1611 GGATCTCAGAGAAGTTGTTAAGGAGATCAAGAGTGAGTTCGAGATTGCTTCTTCTTGTGG 1670
Query 1607 TAAGGAGGTTGCTTTGTTACTTGAGGTTGGCAAGTTGCCTTATCAGCATAAAAACAATGG 1666
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1671 GAAGGAGGTTGCTTTGTTACTTGAAGTCGGCAAGTTGCCTTATCAGCATAAAAACAATGG 1730
Query 1667 GGTTAAAGTTATCTTATCCAGGATCATGTATCTGGTAGCACCATCCACACGGTCATCGCA 1726
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1731 CGTTAAAGTTATCTTATCCAGGATCATGTATCTGGTAGCACCATCCACACGGTCATCGCA 1790
Query 1727 CTCTCAGCCCAGACTATCAATACGTTTAACATCTAGGACACGGAAAATGGCGAAAGCATA 1786
|||||||||||||||||||||||||||||||||||| || || |||||||||||| ||||
Sbjct 1791 CTCTCAGCCCAGACTATCAATACGTTTAACATCTAGAACTCGAAAAATGGCGAAATCATA 1850
Query 1787 CAATGGACAAGATGTTAATGGAGGCTTCAATGGAAACCTCTCATCAACCTTGGAGAAACT 1846
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1851 CAATGGACAAGATGTTAATGGAGGCTTCAATGGAAACCTCTCATCAACCTTAGAGAAACT 1910
Query 1847 GTATGCATGGGAAAAGAAACTGTACAAAGAAGTCAAGGACGAAGAAAAGCTGCGTGCCAT 1906
|||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 1911 GTATGCGTGGGAAAAGAAACTGTACAAGGAAGTCAAGGACGAAGAAAAGCTTCGTGCTAT 1970
Query 1907 CTATGAAGAGAAGTGCAGGAGACTaaaaaaaaTGGATAGTCATGGAGCAGAATCTATCAA 1966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1971 CTATGAAGAGAAGTGCAGGAGACTAAAAAAAATGGATAGTCATGGAGCAGAATCTATCAA 2030
Query 1967 GATCGATGCTACTCGGGCAGCCATTAGGAAGCTTCTGACCAAAATCGATGTCTGTATAAG 2026
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2031 GATCGATGCTACTCGGGCAGCCATTAGGAAGCTTCTGACCAAAATCGATGTTTGTATAAG 2090
Query 2027 ATCTGTTGATTCTATTTCCAGCAGAATCCATAAACTTAGAGATGAAGAATTGCAGCCACA 2086
||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2091 ATCAGTTGATTCGATTTCCAGCAGAATCCATAAACTTAGAGATGAAGAGTTGCAGCCACA 2150
Query 2087 ACTGACACAGTTAATTCACGGGTTGATAAGAATGTGGAGGTCAATGCTGAGGTGCCACCA 2146
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2151 GTTGATACAGTTAATTCACGGGTTGATAAGAATGTGGAGGTCAATGCTGAGGTGCCACCA 2210
Query 2147 GAAACAGTTTCAGGCGATCATGGAGAGCAAGGTTCGATCTCTAAAGGCGAACACAACCTT 2206
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2211 GAAACAGTTTCAGGCGATCAGGGAGAGCAAGGTTCGATCTCTAAAGGCGAACACAACCTT 2270
Query 2207 ACAAAAAGACTCTGGCTCGACAGCAATTCTTGATCTTGAGATAGAGCTTAGAGAATGGTG 2266
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2271 ACAAAATGACTCTGGCTCTACAGCAATTCTTGATCTTGAGATAGAGCTTAGAGAATGGTG 2330
Query 2267 CAGCAGCTTCAACGACTGGGTCAACAGCCAGAAATCATATGTCCAGTTCCTAAGCGGCTG 2326
|| |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 2331 CATCAGCTTCAACAACTGGGTCAACACCCAGAAATCATACGTCCAGTTCCTAAGCGGATG 2390
Query 2327 GCTCTCGAAATGCCTTCACTATGAACCAGAGGCAACCGATGACGGAATAGCTCCTTTCTC 2386
|||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 2391 GCTCACGAAATGCCTTCACTATGAACCCGAGGCAACCGATGACGGAATCGCTCCTTTCTC 2450
Query 2387 TCCTAGCCAGATCGGTGCACCGCCCATATTTATCATATGCAAAGATTGGCAAGAAGCAAT 2446
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 2451 TCCTAGCCAGATCGGTGCACCGCCCATCTTTATCATTTGCAAAGATTGGCAAGAAGCAAT 2510
Query 2447 GTGTAGAATATCTGGAGAGAATGTGACCAATGCAATGCAAGGTTTTGCTTCAAGTCTACA 2506
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2511 GTGTAGAATATCTGGAGAGAATGTGACCAATGCAATGCAAGGTTTTGCTTCAAGCCTACA 2570
Query 2507 CGAGATATGGGAGAAACAAGAAGAAGAGCAAAGAGTAAGAGCGCAATTTGAGCAGCGAGA 2566
|||| |||||||||| ||||||||||||||||| |||| |||||||| ||||||||||||
Sbjct 2571 CGAGCTATGGGAGAAGCAAGAAGAAGAGCAAAGGGTAAAAGCGCAATCTGAGCAGCGAGA 2630
Query 2567 TGCAGAGTCAGAGAGAAGTTTGGTTTCGAAAGGTCGGTCAGAGAGCGGGATATCGGCTTT 2626
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 2631 TGCAGAGTCAGAGAGAAGTGTGGTTTCGAAAGGTCGGTCAGAGAGCGGGATATCAGCTTT 2690
Query 2627 GGATGATTTGAAAGTGGATTTAGATTCAATGAGGAAGAAGCTAGTAGAGGAAAGAGGTAA 2686
|||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||
Sbjct 2691 GGATGATTTGAAAGTGGATTTAGATTCAATGAGGAAGAGGCTAGTCGAGGAGAGAGGTAA 2750
Query 2687 GCGTAAAGAAACCATTAAGCTTGTGAACAACACGTCTTCGAGTAGCTTGAAAGCTGGTTT 2746
| ||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||
Sbjct 2751 GGGTAAAGAAACCATTAAGCTTGTGAACAACGCGTCTTCGAGCAGCTTAAAAGCTGGTTT 2810
Query 2747 AGTTCCCATTTTCGGGGCACTGAGAAAATTCACAGCAGAAGTTGTGAAAGCTCATGAAAT 2806
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2811 AGTTCCCATTTTCGGGGCACTGAGAAAATTCACATCAGAAGTTGTGAAAGCTCATGAAAT 2870
Query 2807 TGTTAGGCTTCAACATCCTCAGACTTCTTCGGCTTGAGCAGAGATTGTGGAGTTACCACT 2866
|||||||||||||||||||||||| ||||| ||||| ||||| |||||| | |
Sbjct 2871 TGTTAGGCTTCAACATCCTCAGACCTCTTC---TTGAGTAGAGAGTGTGGA----C---T 2920
Query 2867 TACCACATTTTTGCACCGTTTTGAAGTTTCGTTAC----A--T-A----TAGGTTTTATA 2915
||||||||||||||||||||||||||||| ||||| | | | ||||| | |||
Sbjct 2921 TACCACATTTTTGCACCGTTTTGAAGTTTTGTTACTTGCAAATTAGACATAGGTCT-ATA 2979
Query 2916 TAGAAGAAAATTGGTGTATAGACAAGTTCATATTCATTTATTGGTTGATTAGTTTGCTTT 2975
|||||| |||||| |||||||| |||||||||||| |||||||||| ||||||| | ||
Sbjct 2980 TAGAAGGAAATTGTTGTATAGATGAGTTCATATTCAATTATTGGTTGGTTAGTTTCCCTT 3039
Query 2976 GTAGGCCGTTTTTAAATGGTGAAGAAGAAAATATCTAGTTT 3016
||| |||||||||||||||||||||||| |||||||||||
Sbjct 3040 GTAAACCGTTTTTAAATGGTGAAGAAGAAGATATCTAGTTT 3080
Score = 56.5 bits (30), Expect = 1e-06
Identities = 33/34 (97%), Gaps = 1/34 (3%)
Strand=Plus/Plus
Query 1 TGTTTTCACGTTTTCATATAAATCAGCAACTCAT 34
|||||||||||||||||||||||||||||| |||
Sbjct 4 TGTTTTCACGTTTTCATATAAATCAGCAAC-CAT 36
> AT1G21740.1 | Symbols: | Protein of unknown function (DUF630
and DUF632) | chr1:7641580-7645078 FORWARD LENGTH=2862
Length=2862
Score = 1081 bits (585), Expect = 0.0
Identities = 1096/1336 (82%), Gaps = 61/1336 (5%)
Strand=Plus/Plus
Query 1236 GAAGAAACTTTGAGGGAAGTGCCAATGCCAGAACAAGTC-ACTGAGAGCTC-CTTGGATT 1293
|||| ||||| |||| |||||| || |||| | | | || |||||||| |||| ||
Sbjct 1177 GAAGGAACTTCAAGGGCAGTGCCTGTGGTAGAA-AGGGCTACGGAGAGCTCTTTTGG-TT 1234
Query 1294 CAGAGACAATTTCGTCGTTTTCAG-GAAGTGATGTGGAATCGGAGTTTCACT-ATGTTAA 1351
|| |||| | ||||||||||| | | ||||| | || ||||||||||| | |||||||
Sbjct 1235 CAAAGACTGTGTCGTCGTTTTC-GAGCAGTGAAGAAGAGTCGGAGTTTCA-TCATGTTAA 1292
Query 1352 TGGTGGTGAAGGAAAGAGCAGCA-TTA-G-TTCA-ATCAGTCACGGGACGG--G-GACAA 1404
|| ||| ||||| ||||| |||| | | | || | | | || | ||||| | || |
Sbjct 1293 TGATGGAGAAGGGAAGAGTAGCAGTAATGATTTAGGT-GGGCATGAGACGGTTGCTACTA 1351
Query 1405 AGAG-CTCGAGAGAAGTAGAAGAACAGTATGGGAGGAAGAAAGGAGTGAGCTTTGAGTTG 1463
|||| | | |||||||||||||| | |||| ||||||||||||||| ||||||||||||
Sbjct 1352 AGAGTGTTG-GAGAAGTAGAAGAAGAATATGTGAGGAAGAAAGGAGTTAGCTTTGAGTTG 1410
Query 1464 GAGGAGACAACGAGCACTTCGTCTTTTGATGTTGAATCTTCCAAGATAAGTAGCT-TATC 1522
|| || | || | ||| | |||||||||||||||||||||||||| ||||| | |||
Sbjct 1411 GATGA-A-AATG-TAACTACTTCTTTTGATGTTGAATCTTCCAAGATTAGTAG-TCTAT- 1465
Query 1523 CAG-TTTGTCGATCCATGCCACTAGGGATCTCAGAGAAGTTGTCAAGGAGATAAAGAGTG 1581
| | |||||| | ||||||||||| ||||| ||||||||||| |||||||| |||||||
Sbjct 1466 CTGCATTGTCGGTTCATGCCACTAGAGATCTTAGAGAAGTTGTGAAGGAGATCAAGAGTG 1525
Query 1582 AGTTCGAGGTTGCTTCTTC-CTGTGGTAAGGAGGTTGCTTTGTTACTTGAGGTTGGCAAG 1640
|||| |||||||||||||| | ||| ||||| || ||| |||| ||||||||| |||||
Sbjct 1526 AGTTTGAGGTTGCTTCTTCAC-ATGGGAAGGAAGTGGCTGTGTTGCTTGAGGTTAGCAAG 1584
Query 1641 TTGCCTTATCAGCATAAAAACAAT-GGGG-TTAAAGTTATCTTATCCAGGATCATGTATC 1698
|||||||||||||| |||| | |||| | ||||| ||||| ||| ||||||||||||
Sbjct 1585 TTGCCTTATCAGCA-GAAAA-GTTCGGGGCTCAAAGTCATCTTCTCCCGGATCATGTATC 1642
Query 1699 TGGTAGCACCATCCACACG-GTCATCGCACTCTCAGCC-CAGACTATCAATACGTTTAAC 1756
|||| |||||||||||| | ||||||| ||||||||| || || ||||||||||||||
Sbjct 1643 TGGTTGCACCATCCACA-GTTTCATCGCGCTCTCAGCCTCA-ACCGTCAATACGTTTAAC 1700
Query 1757 ATCTAGGACACGGAAAATGGCGAAAGCATACAATGGACAAGATGTTA-ATGGAGGCTTCA 1815
|||||||| | |||||| || ||| |||||||||| || ||||||| | | |||||| |
Sbjct 1701 ATCTAGGATATTGAAAATTGCAAAATCATACAATGGTCAGGATGTTAGA-GAAGGCTT-A 1758
Query 1816 A-TGGAAACCTCTCATCAACCTTGGAGAAACTGTATGCATGGGAAAAGAAACTGTACAAA 1874
| ||| ||||||||| ||||||||||| |||| ||||| |||||||||||||||||||||
Sbjct 1759 ACTGGGAACCTCTCAGCAACCTTGGAGCAACTCTATGCTTGGGAAAAGAAACTGTACAAA 1818
Query 1875 GAAGTCAAGGACGAAGAAAAGCTGCGTGCCATCTATGAAGAGAAGTGCAGGAGACTaaaa 1934
||||||||||| ||||| ||||| |||| |||||||||| |||||||| | ||| |||
Sbjct 1819 GAAGTCAAGGATGAAGAGAAGCTTCGTGTTGTCTATGAAGAAAAGTGCAGAACACTGAAA 1878
Query 1935 aaaaTGGATAGTCATGGAGCAGAATCTATCAAGATCGATGCTACTCGGGCAGCCATTAGG 1994
||| ||||||||| ||| || ||||||| |||||| ||| ||||||| |||||||||||
Sbjct 1879 AAACTGGATAGTCTTGGTGCGGAATCTAGCAAGATTGATACTACTCGAGCAGCCATTAGA 1938
Query 1995 AAGCTTCTGACCAAAATCGATGTCTGTATAAGATCTGTTGATTCTATTTCCAGCAGAATC 2054
||||| || |||||| |||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct 1939 AAGCTGCTAACCAAACTCGACGTCTGTATAAGATCTGTTGATTCCATTTCCAGCAGGATA 1998
Query 2055 CATAAACTTAGAGATGAAGAATTGCAGCCACAACTGACACAGTTAATTCACGGGTTGATA 2114
|||||||| ||||| |||||||| ||||| ||||| ||||| || |||||||||||||||
Sbjct 1999 CATAAACTGAGAGACGAAGAATTACAGCCTCAACTAACACAATTGATTCACGGGTTGATA 2058
Query 2115 AGAATGTGGAGGTCAATGCTGAGGTGCCACCAGAAACAGTTTCAGGCGATCATGGAGAGC 2174
||||||||||| |||||||| | |||||||||||| ||||| ||||| ||||||||||||
Sbjct 2059 AGAATGTGGAGATCAATGCTCAAGTGCCACCAGAAGCAGTTCCAGGCAATCATGGAGAGC 2118
Query 2175 AAGGTTCGATCTCTAAAGGCGAACACAACCTTACAAAAAGACTCTGGCTCGACAGCAATT 2234
|||||||||||||| | ||| ||||| |||||||| |||||| || | || ||| |||
Sbjct 2119 AAGGTTCGATCTCTCAGGGCAAACACCGGCTTACAAAGAGACTCCGGTTTGAAAGCTATT 2178
Query 2235 CTTGATCTTG-AGATAGAGCTTA-GAGAATGGTGCAGCAGCTTCAACGACTGGGTCAACA 2292
|||||| ||| |||| ||||| | |||||||||||| |||||||||||||||||||| |
Sbjct 2179 CTTGAT-TTGGAGATGGAGCT-ACGAGAATGGTGCATTAGCTTCAACGACTGGGTCAATA 2236
Query 2293 GC-CAGAAATCATATGTCCAGT-TCCTAAGCGGCTGGCTCTCGAA-ATGCCTTCACTATG 2349
| ||||||||||| || ||| || ||| || |||||||| || ||| ||||||||||
Sbjct 2237 -CTCAGAAATCATACGTGGAGTCTC-TAAATGGATGGCTCTC-AAGATGTCTTCACTATG 2293
Query 2350 AACCAGAGGCAACCGATGACGGAATAGCTCCTTTCTCTCCTAGCCAGATCGGTGCACCGC 2409
|||| || |||| || |||||||| || |||||||||||||||| | | | || | | |
Sbjct 2294 AACCTGAATCAACGGAGGACGGAATTGCCCCTTTCTCTCCTAGCC-G-T-GTTGGAGCTC 2350
Query 2410 C-CATATTTATC---ATATGCAAAGATTGGCAAGAAGCAATGT-GTAGAATATCTGGAGA 2464
| || ||| || ||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct 2351 CACAGGTTT-TCGTTATATGCAAAGATTGGCAAGAAGCAATGGCG-AGAATCTCTGGAGA 2408
Query 2465 GAATGTGACCAATGCAATGCAAGGTTTTGCTTCAAGTCTACACGAGA-TATGGGAGAAAC 2523
||| || | || ||||||||||| ||||| || ||||| || || | ||||||||| ||
Sbjct 2409 GAACGTTTCAAACGCAATGCAAGGCTTTGCCTCGAGTCTGCATGA-ACTATGGGAGAGAC 2467
Query 2524 AAGAAGAAGAGCAAAG 2539
|||| || ||||||||
Sbjct 2468 AAGATGAGGAGCAAAG 2483
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149948992627
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5