BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476916
Length=1749
Score E
Sequences producing significant alignments: (Bits) Value
AT1G77510.1 | Symbols: ATPDIL1-2, PDI6, ATPDI6, PDIL1-2 | PDI-l... 2555 0.0
AT1G21750.1 | Symbols: ATPDIL1-1, ATPDI5, PDI5, PDIL1-1 | PDI-l... 1437 0.0
AT3G62510.1 | Symbols: | protein disulfide isomerase-related |... 211 2e-53
> AT1G77510.1 | Symbols: ATPDIL1-2, PDI6, ATPDI6, PDIL1-2 | PDI-like
1-2 | chr1:29126650-29129612 FORWARD LENGTH=1798
Length=1798
Score = 2555 bits (1383), Expect = 0.0
Identities = 1618/1724 (94%), Gaps = 45/1724 (3%)
Strand=Plus/Plus
Query 1 AATGCGCTGATAAATATCATC-TC-CT-CTGATaagaagaagaagaa--cac---aagaa 52
|||||||| |||||||||||| || || ||| |||||||||||||| ||| |||||
Sbjct 5 AATGCGCTCATAAATATCATCTTCTCTATTGAGAAGAAGAAGAAGAATTCACAAGAAGAA 64
Query 53 tattcacagagaaagaaaagagagagagCGATAATAATGGCGATTAAGGGTTTCGCGTGT 112
||||||| || || | |||||||||||||||||||||| |||||||||||||||||
Sbjct 65 TATTCAC--AG--AG---A-AGAGAGAGCGATAATAATGGCGTTTAAGGGTTTCGCGTGT 116
Query 113 TTTTCGATCCTTTTATTGTTATCTCTGTTCGCTTCCTCCATAAGAAGCGAGCAGACGAAG 172
|||||||| ||||| ||||| ||||| |||| |||||| ||| |||||||| ||||||||
Sbjct 117 TTTTCGATTCTTTTGTTGTTGTCTCTATTCGTTTCCTCTATACGAAGCGAGGAGACGAAG 176
Query 173 GAATTTGTCTTGACTCTCGATCACTCTAACTTCACCGAAACCATCACCAAACACGATTTC 232
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 177 GAATTTGTCTTGACTCTCGATCACTCTAACTTCACCGAAACCATCTCCAAGCACGATTTC 236
Query 233 ATCGTCGTCGAGTTCTACGCCCCTTGGTGTGGTCACTGCCAGAAGCTTGCTCCTGAGTAC 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 237 ATCGTCGTCGAGTTCTACGCCCCTTGGTGTGGTCACTGCCAGAAGCTTGCTCCTGAGTAC 296
Query 293 GAGAAGGCTGCATCAGAGTTGAGCAGTCATAACCCACCTCTCGCTCTCGCCAAGATTGAT 352
||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||
Sbjct 297 GAGAAGGCTGCATCAGAGTTGAGTAGTCATAACCCTCCTCTTGCTCTCGCCAAGATCGAT 356
Query 353 GCTAGTCAAGAAGCAAACAAAGGATTTGCAAACGAATACAAGATTCAGGGTTTCCCCACT 412
|||||| ||||||||||||||| |||||| || || ||||||||||||||||||||||||
Sbjct 357 GCTAGTGAAGAAGCAAACAAAGAATTTGCTAATGAGTACAAGATTCAGGGTTTCCCCACT 416
Query 413 CTTAAGATTTTGAGAAATGGAGGGAAATCAGTTCAAGATTACAACGGACCTCGTGAAGCT 472
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 417 CTTAAGATTTTGAGAAATGGAGGGAAGTCGGTTCAAGATTACAACGGACCTCGTGAAGCT 476
Query 473 GAGGGTATTGTCACTTATTTGAAGAAGCAAAGTGGTCCTGCTTCTGTTGAAATTAAGTCA 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 GAGGGTATTGTCACTTATTTGAAGAAGCAAAGTGGTCCTGCTTCTGTTGAAATTAAGTCA 536
Query 533 GCTGATTCTGCCGCTGAGATTGTGGGTGAAAAGAATGTTGTTGCTGTTGGAGTGTTCCCT 592
|||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 537 GCTGATTCTGCCACTGAGGTTGTTGGTGAAAAGAATGTTGTTGCTGTTGGAGTGTTCCCT 596
Query 593 AAATTATCTGGCGAGGAGTTTGATTCTTTCATGGCCCTTGCTGAGAAATTGCGTGCTGAC 652
|||||||| || || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 AAATTATCCGGGGATGAGTTTGATTCTTTCATGGCCCTTGCTGAGAAATTGCGTGCTGAC 656
Query 653 TATGATTTCGCACACACTTTGGATGCCAAGGTTCTTCCTCGTGGAGAGTCTGTGGAAGGA 712
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 657 TATGATTTCGCACACACTTTGGATGCTAAGTTTCTTCCTCGTGGAGAGTCTGTGGAAGGA 716
Query 713 CCTGTAGTGAGGCTATTCAAGCCTTTTGATGAGTTGTTTGTTGATTCCAAGGACTTCAAT 772
|||| ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 717 CCTGCAGTGAGGCTGTTCAAGCCTTTTGATGAATTGTTTGTTGACTCCAAGGACTTCAAT 776
Query 773 GGGGAAGCTCTAGAGAAATTTGTCAAAGAATCAAGTATTCCACTTGTCACCGTCTTTGAC 832
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 777 GGGGAAGCTCTAGAGAAATTTGTCAAAGAATCAAGTATCCCACTTGTCACCGTCTTTGAC 836
Query 833 AGTGATCCAAACAACCACCCATATGTTGTCAAATTCTTTGACAGCCCTGCCACTAAGGCA 892
|||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||
Sbjct 837 AGTGATCCAAACAACCACCCTTATGTTGCCAAATTCTTTGAAAGCCCTGCCACTAAGGCG 896
Query 893 ATGATGTTCGTTAACTTCACCGGAGCAACAGCTGAATCTCTAAAATCAAAGTACCGTGAA 952
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 897 ATGATGTTCGTTAACTTCACTGGAGCAACAGCTGAAGCTCTAAAATCAAAGTACCGTGAA 956
Query 953 GTAGCTACATCCAACAAAGGTCAAGGTCTTGCCTTCCTTGTCGGTGATGCTGAGAGCAGC 1012
||||||||||||||||||| |||| |||||||||||||||| |||||||| |||||||||
Sbjct 957 GTAGCTACATCCAACAAAGATCAAAGTCTTGCCTTCCTTGTTGGTGATGCAGAGAGCAGC 1016
Query 1013 CAAGGCGCTTTCCAGTACTTTGGACTCGAAGAGAGCCAAGTTCCCCTCATCATCATCCAG 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 CAAGGCGCTTTCCAGTACTTTGGACTCGAAGAGAGCCAAGTTCCCCTCATCATCATCCAG 1076
Query 1073 ACCCCAGATAACAAGAAGTATTTGAAAGCCAACGTTGAGGTTGACCAGATTGAATCATGG 1132
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1077 ACCCCAGATAACAAGAAGTATTTGAAAGTCAACGTTGAGGTTGACCAGATTGAATCATGG 1136
Query 1133 GTCAAGGACTTCCAGGACGGAAAAGTTGCCGCCCACAAAAAATCTCAACCTATTCCAGCT 1192
|||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||
Sbjct 1137 TTCAAGGACTTCCAGGACGGAAAAGTTGCTGTCCACAAAAAATCCCAACCTATTCCAGCT 1196
Query 1193 GAGAACAACGAACCTGTGAAGGTTGTTGTTGCCGAGAGCCTTGATGACATAGTTTTCAAG 1252
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1197 GAGAACAACGAACCTGTGAAGGTTGTTGTTGCCGAGAGCCTTGACGACATAGTTTTCAAG 1256
Query 1253 TCTGGAAAGAATGTCTTGATTGAGTTCTATGCACCATGGTGTGGACATTGTCAAAAACTT 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 TCTGGAAAGAATGTCTTGATTGAGTTCTATGCACCATGGTGTGGACATTGTCAAAAACTT 1316
Query 1313 GCTCCAATCTTGGACGAAGTGGCTTTGTCATTCCAGAACGACCCAAGTGTGATCATTGCA 1372
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1317 GCTCCAATCTTGGACGAAGTGGCTTTGTCATTCCAGAACGACCCAAGTGTGATCATAGCA 1376
Query 1373 AAATTGGACGCAACCGCAAATGATATCCCAAGTGATACCTTTGATGTGAAAGGATTCCCG 1432
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1377 AAATTGGACGCAACCGCAAATGATATCCCAAGTGATACCTTCGATGTGAAAGGATTCCCG 1436
Query 1433 ACCATTTACTTCAGGTCAGCGAGCGGAAACGTTGTAGTGTACGAAGGAGACAGGACAAAG 1492
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1437 ACCATTTACTTCAGGTCAGCGAGCGGAAATGTTGTAGTGTACGAAGGAGACAGGACAAAG 1496
Query 1493 GAAGACTTCATAAACTTCGTTGAGAAGAACAGTGAGAAGAAGCCAATTTCTCATGGAGAA 1552
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1497 GAAGACTTCATAAACTTCGTTGAGAAGAACAGTGAGAAGAAGCCAACTTCTCATGGAGAA 1556
Query 1553 GAGTCTACCAAGA--------C-T--GAAGA---A--A--CGGCCGCAAAGGACGAGCTG 1594
||||||||||||| | | ||||| | | ||||||||||||||||||||
Sbjct 1557 GAGTCTACCAAGAGTGAGGAACCTAAGAAGACCGAGGAAACGGCCGCAAAGGACGAGCTG 1616
Query 1595 TAGAAGTCTCATGAGTTTAT-TTTCGGAATTTTGAGTAGGAGCAtttctcttcttctcca 1653
||||| |||||||||||| | ||||||||||| |||||||||| |||||||||||| |||
Sbjct 1617 TAGAAATCTCATGAGTTT-TGTTTCGGAATTT-GAGTAGGAGCGTTTCTCTTCTTCACCA 1674
Query 1654 t--c-a---gaatcttcttttttctttta-cagttttacagttt 1690
| | | |||||||||||||||||| | ||||||||||||||
Sbjct 1675 TATCCAACAGAATCTTCTTTTTTCTTT-AGCAGTTTTACAGTTT 1717
> AT1G21750.1 | Symbols: ATPDIL1-1, ATPDI5, PDI5, PDIL1-1 | PDI-like
1-1 | chr1:7645700-7648841 FORWARD LENGTH=1900
Length=1900
Score = 1437 bits (778), Expect = 0.0
Identities = 1254/1481 (85%), Gaps = 44/1481 (3%)
Strand=Plus/Plus
Query 66 agaaaagagagagagCGATAATAATGGCGATTAAGGGTTTCGCG-TGTTTTTCGATCCTT 124
||| || |||||||||| ||||||||||| | ||| ||| || || ||||||||||
Sbjct 49 AGAGAA-AGAGAGAGCG---ATAATGGCGATGAGGGGCTTCACGTTG-TTTTCGATCC-- 101
Query 125 TTATTGTTATCTCTGTTCGCTTCCTCCATAAGAAGC---GAG-C--AGACGAAGGAATTT 178
|| |||| ||| ||| |||||| || || |||||| ||| | |||||||||| ||
Sbjct 102 TT-GTGTTGTCTTTGTGCGCTTCGTCTATCAGAAGCGAAGAGACGGAGACGAAGGAGTTC 160
Query 179 GTCTTGA-CTCTCGATCACTCTAACTTCACCGAAACCATCACCAAACACGATTTCATCGT 237
|| |||| || | |||||| ||||||||||||| ||||||| ||||||||||||||||||
Sbjct 161 GTGTTGACCT-TGGATCACACTAACTTCACCGATACCATCAACAAACACGATTTCATCGT 219
Query 238 CGTCGAGTTCTACGCCCCTTGGTGTGGTCACTGCCAGAAGCTTGCTCCTGAGTACGAGAA 297
|||||||||||||||||| |||||||| |||||| || |||||||||||||||| |||||
Sbjct 220 CGTCGAGTTCTACGCCCCATGGTGTGGACACTGCAAGCAGCTTGCTCCTGAGTATGAGAA 279
Query 298 GGCTGCATCAGAGTTGAGCAGTCATAACCCACCTCTCGCTCTCGCCAAGATTGATGCTAG 357
|||||| |||| ||||||||| | |||||| | | ||| || ||||||||||| ||
Sbjct 280 GGCTGCGTCAGCTTTGAGCAGTAACGTCCCACCAGTGGTTCTTGCTAAGATTGATGCCAG 339
Query 358 TCAAGAAGCAAACAAAGGATTTGCAAA-CGAATACAAGATTCAGGGTTTCCCCACTCTTA 416
| | ||| |||||| || |||||||| | ||||| || ||||||||||||| || | |
Sbjct 340 TGAGGAAACAAACAGAGAATTTGCAACTC-AATACGAGGTTCAGGGTTTCCCAACAATCA 398
Query 417 AGATTTTGAGAAATGGAGGGAAAT-CAGTTCAAGATTACAACGGACCTCGTGAAGCTGAG 475
||||||| ||||| ||||| ||| | |||||||| ||||||||||||||||||||||||
Sbjct 399 AGATTTTCAGAAACGGAGG-AAAGGCTGTTCAAGAATACAACGGACCTCGTGAAGCTGAG 457
Query 476 GGTATTGTCACTTATTTGAAGAAGCAAAGTGGTCCTGCTTCTGTTGAAATTAAGTCAGCT 535
|||||||| ||||| |||||||| |||||||| |||||||||| ||||||||||||||||
Sbjct 458 GGTATTGTTACTTACTTGAAGAAACAAAGTGGACCTGCTTCTGCTGAAATTAAGTCAGCT 517
Query 536 GATTCTGCCGCTGAGATTGTGGGTGAAAAGAATGTTGTTGCTG-TTGG-AGTGTTCCCTA 593
||| ||| ||||| |||| |||| ||||| ||||||| || |||| | | |||||||
Sbjct 518 GATGATGCTTCTGAGGTTGTTAGTGACAAGAAGGTTGTTG-TGGTTGGGATT-TTCCCTA 575
Query 594 AATTATCTGGCGAGGAGTTTGATTCTTTCATGGCCCTTGCTGAGAAATTGCG-TGCTGAC 652
|| |||||||| ||||||||||||||||||||| |||||||||||||||| | ||||
Sbjct 576 AACTATCTGGCTCCGAGTTTGATTCTTTCATGGCCATTGCTGAGAAATTGCGCT-CTGAG 634
Query 653 T-ATGATTTCGCACACACTTTGGATGCCAAGGTTCTTCCTCGTGGAGAGTC-TGTGGAA- 709
| | ||||||||||| || | |||||||||| ||||||| ||||||||||| | || ||
Sbjct 635 TTA-GATTTCGCACATACCTCGGATGCCAAGCTTCTTCCCCGTGGAGAGTCATCTGTAAC 693
Query 710 -GGACCTGTAGTGAGGCTATTCAAGCCTTTTGATGAGTTGTTTGTTGATTCCAAGGACTT 768
|||||||| || ||||||||||| || |||||||| ||||||||||||||||| ||
Sbjct 694 AGGACCTGTGGTCAGGCTATTCAAACCCTTTGATGAACAATTTGTTGATTCCAAGGATTT 753
Query 769 CAATGGGGAAGCTCTAGAGAAATTTGTCAAAGAATCAAGTATTCCACTTGTCACCGTCTT 828
| |||| |||||||| |||||||||||||||||||| || ||||||||| ||||||||||
Sbjct 754 CGATGGTGAAGCTCTGGAGAAATTTGTCAAAGAATCCAGCATTCCACTTATCACCGTCTT 813
Query 829 TGACAGTGATCCAAACAACCACCCATATGTTGTCAAATTCTTTGACAGCCCTGCCACTAA 888
||||| |||||||||||||||||||||||| |||| |||||||| ||| || || ||
Sbjct 814 TGACAAAGATCCAAACAACCACCCATATGTTATCAAGTTCTTTGAAAGCACTAATACCAA 873
Query 889 GGCAATGATGTTCGTTAACTTCACCGGAGCAAC-AGCTGAATCTCTAAAATCAAAGTACC 947
||| ||| ||||| |||||||||| |||| || |||||| ||||| |||||||||||||
Sbjct 874 GGCGATGTTGTTCATTAACTTCACTGGAG-AAGGAGCTGAGTCTCTTAAATCAAAGTACC 932
Query 948 GTGAAGTAGCTACATCCAACAAAGGTCAAGGTCTT-GCCTTCCTTGTCGGTGATGCTGAG 1006
||||||| |||||||||||||| || || |||||| || |||||| | ||||||||||||
Sbjct 933 GTGAAGTTGCTACATCCAACAAGGGACAGGGTCTTAGC-TTCCTTCTAGGTGATGCTGAG 991
Query 1007 AGCAGCCAAGGCGCTTTCCAGTACTTTGGACTCGAAGAGAGCCAAGTTCCCCTCATCATC 1066
| ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 992 AACAGCCAAGGTGCATTCCAGTACTTTGGACTCGAAGAGAGCCAAGTTCCTCTCATCATC 1051
Query 1067 ATCCAGACCCCAGATAACAAGAAGTATTTGAAAGCCAACGTTGAGGTTGACCAGATTGAA 1126
|||||||| | || ||||||| || ||||| | || |||||||||||||||||||||
Sbjct 1052 ATCCAGACTGCTGACGACAAGAAATACCTGAAAACAAATGTTGAGGTTGACCAGATTGAA 1111
Query 1127 TCATGGGTCAAGGACTTCCAGGACGGAAAAGTTGC-CGCCCACAAAAAATCTCAACCTAT 1185
|||||||||||||||||| |||| |||||| |||| | ||||||||||||||||||||||
Sbjct 1112 TCATGGGTCAAGGACTTCAAGGATGGAAAAATTGCTC-CCCACAAAAAATCTCAACCTAT 1170
Query 1186 TCCAGCTGAGAACAACGAACCTGTGAAGGTTGTTGTTGCCGAGAGCCTTGATGACATAGT 1245
||||| || |||||||| || ||||||||||||||| | || |||||||| ||||| ||
Sbjct 1171 CCCAGCCGAAAACAACGAGCCAGTGAAGGTTGTTGTTTCTGACAGCCTTGACGACATTGT 1230
Query 1246 TTTCAAGTCTGGAAAGAATGTCTTGATTGAGTTCTATGCACCATGGTGTGGACATTGTCA 1305
|| || ||||||||||| || ||| |||| |||||||| |||||||||||||| || ||
Sbjct 1231 CTTAAACTCTGGAAAGAACGTTTTGCTTGAATTCTATGCTCCATGGTGTGGACACTGCCA 1290
Query 1306 AAAACTTGCTCCAATCTTGGACGAAGTGGCTTTGTCATTCCAGAA-CGACCCAAGTGT-G 1363
||| ||||||||||||||||||||||| ||| |||| | ||| || |||| ||||||| |
Sbjct 1291 AAAGCTTGCTCCAATCTTGGACGAAGTTGCTGTGTCGTACCA-AAGCGACTCAAGTGTAG 1349
Query 1364 ATCATTGCAAAATTGGACGCAACCGCAAATGA-TATCCCAAGTGATACCTTTGATGTGAA 1422
|||| || || | || ||||||||||| || | |||||| |||||||||||||||||
Sbjct 1350 -TCATCGCTAAGCTAGATGCAACCGCAAACGACT-TCCCAAAAGATACCTTTGATGTGAA 1407
Query 1423 AGGATTCCCGACCATTTACTTCAGGTCAGCGAGCGGAAACGTTGTAGTGTACGAAGGAGA 1482
|||||||||||||||||||||| |||||||||||||||||||| || |||||||||||
Sbjct 1408 GGGATTCCCGACCATTTACTTCAAATCAGCGAGCGGAAACGTTGTGGTTTACGAAGGAGA 1467
Query 1483 CAGGACAAAGGAAGACTTCATAAACTTCGTTGAGAAGAACA 1523
||||||||||||||| ||||||| |||||| || |||||||
Sbjct 1468 CAGGACAAAGGAAGATTTCATAAGCTTCGTCGACAAGAACA 1508
> AT3G62510.1 | Symbols: | protein disulfide isomerase-related
| chr3:23123398-23123774 FORWARD LENGTH=282
Length=282
Score = 211 bits (114), Expect = 2e-53
Identities = 132/141 (94%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 1106 GTTGAGGTTGACCAGATTGAATCATGGGTCAAGGACTTCCAGGACGGAAAAGTTGCCGCC 1165
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | |
Sbjct 22 GTTGAGGTTGACCAGATTGAATCATGGGTCAAGGACTTCCAGGATGGAAAAGCTGCTGTC 81
Query 1166 CACAAAAAATCTCAACCTATTCCAGCTGAGAACAACGAACCTGTGAAGGTTGTTGTTGCC 1225
|||||||| |||||||||||||||||||||||||||||||| |||||| ||||||| |||
Sbjct 82 CACAAAAATTCTCAACCTATTCCAGCTGAGAACAACGAACCAGTGAAGCTTGTTGTCGCC 141
Query 1226 GAGAGCCTTGATGACATAGTT 1246
||||||||||| |||||||||
Sbjct 142 GAGAGCCTTGACGACATAGTT 162
Score = 111 bits (60), Expect = 2e-23
Identities = 62/63 (98%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 1442 TTCAGGTCAGCGAGCGGAAACGTTGTAGTGTACGAAGGAGACAGGACAAAGGAAGACTTC 1501
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 161 TTCAGGTCAGCGAGCGGAAACGTTGTAGTATACGAAGGAGACAGGACAAAGGAAGACTTC 220
Query 1502 ATA 1504
|||
Sbjct 221 ATA 223
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 86495539035
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5