BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476917
Length=1220
Score E
Sequences producing significant alignments: (Bits) Value
AT1G77520.1 | Symbols: | O-methyltransferase family protein | ... 1792 0.0
AT1G77530.1 | Symbols: | O-methyltransferase family protein | ... 1362 0.0
> AT1G77520.1 | Symbols: | O-methyltransferase family protein
| chr1:29130403-29132180 FORWARD LENGTH=1473
Length=1473
Score = 1792 bits (970), Expect = 0.0
Identities = 1142/1225 (93%), Gaps = 11/1225 (1%)
Strand=Plus/Plus
Query 1 ATGGCACTAACTCTGAATGTTGAAACCACATTACCTTCTTATAACCATCAACAATAATGA 60
|||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 99 ATGGCACTAACTCTCCATGTTGAAACCACATTAATTTCTTATAACCAACAACAATAATGA 158
Query 61 CAAACCATCTTCAAGATTCCTTAACC-ACTTACCCAAAACCGGTTTTAACCAAAGAAGAA 119
||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||
Sbjct 159 CAAACCATCTTCAAGATCCCTT-ACCTACTTACCCAAAACCGGTTTTAACCAAAGAAGAA 217
Query 120 CAAGAAATCGACGAGAAAATGGTGAGTTTGCAAGCTGAGAGTATCGTGAACACCGTGGCC 179
|||||| | |||||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct 218 CAAGAAGTGGACGAGAAAATGGTAAGCTTGCAAGCAGAGAGTATCGTGAACACCGTGGCT 277
Query 180 TTCCCTATGGTTCTCAAAGCCGCCTTCGAGCTTGGCGTCATCGACACCATCGCCGCTGCA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 278 TTCCCTATGGTTCTCAAAGCCGCCTTCGAGCTTGGCGTCATCGACACCATCGCTGCTGCA 337
Query 240 GGAAACGGTACGTGGCTCTCACCGTATGAGATAGCGCGTAGTCTCCCAACCAAACCCACC 299
||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 338 GGAAACGACACGTGGCTCTCACCGTGTGAGATAGCGTGTAGTCTCCCAACCAAACCCACC 397
Query 300 AACCCGGAGGCGCCGGTGTTACTGGACCGGTTGTTGCGCTTACTCGTCAGCCACTCGATC 359
|||||||||||||||||||| || |||||| || || ||||||| |||||||||||||||
Sbjct 398 AACCCGGAGGCGCCGGTGTTGCTTGACCGGATGCTGAGCTTACTTGTCAGCCACTCGATC 457
Query 360 TTGAAGTGCCGTATGATTGAAACCGGAGAGAACGGTCAAACCGGAAAGATCGAGAGGGTA 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 458 TTGAAGTGCCGTATGATTGAAACCGGAGAGAACGGTCGAACCGGAAAGATCGAGAGGGTA 517
Query 420 TATGCAGTCGAACCGGTTTGCAAGTATTTTTTGAGAGATAGTGATGGAT-CGGGATCTCT 478
||||||| ||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct 518 TATGCAGCCGAACCGGTTTGCAAGTATTTTTTGAGAGATAGTGATGG-TACAGGATCTCT 576
Query 479 CGTGTCTCTGTTCATGTTGCTCCATACCGAAGTATTTTTCAAGACTTGGACAAATCTTAA 538
|||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 577 CGTGCCTCTGTTCATGTTGCTCCATACCCAAGTGTTTTTCAAGACTTGGACAAATCTTAA 636
Query 539 AGATGTGATACTAGAAGGAAGAGATGCATTCAACTCTGCCCACGGCATGAAAATTTTCGA 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 637 AGATGTGATACTAGAAGGAAGAGATGCATTCAACTCTGCCCACGGCATGAAAATCTTCGA 696
Query 599 ATACATTAATTCGGATGAACAATTCGCTGAGTTGTTTAATCGTGCAATGTCGGAACCTTC 658
|||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 697 ATACATAAATTCGGATCAACCATTTGCTGAGTTGTTTAATCGTGCAATGTCGGAACCTTC 756
Query 659 CACCATGATCATGAAGAAGGTTCTAGAAC-TATACAGAGGATTCGAAGATGTAAACACTT 717
||||||||||||||||||||||||||| | |||| |||||||| |||||||| |||||||
Sbjct 757 CACCATGATCATGAAGAAGGTTCTAGA-CGTATATAGAGGATTTGAAGATGTTAACACTT 815
Query 718 TGGTGGATGTTGGAGGAGGAAATGGCACCGTTTTAGGTCTAGTCACTTCCAAGTATCCTC 777
|||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||
Sbjct 816 TGGTGGATGTTGGAGGAGGAAATGGCACTGTTTTAGGTTTAGTCACTTCTAAGTATCCTC 875
Query 778 ATATCAAAGGTGTTAATTTCGACTTAGCTCAAGTTTTAACCCAAGCTCCTTTTTATCAAG 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 876 ATATCAAAGGTGTTAATTTCGACTTAGCTCAAGTTTTAACCCAAGCTCCTTTTTATCCAG 935
Query 838 GAGTCGAGCATGTACCTGGAGACATGTTTATAGAAGTTCCAAAGGGAGATGCTGTCTTTA 897
|||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 936 GAGTCGAGCATGTATCTGGAGACATGTTTGTAGAAGTTCCAAAGGGAGATGCCGTCTTTA 995
Query 898 TGAAATGGATACTGCATGATTGGACCGACGAACATTGTATAAAGATTCT-AAAGAATTGT 956
||||||||||||| ||||||||| ||||| |||||||||||||||| ||| ||||||
Sbjct 996 TGAAATGGATACTACATGATTGGGGAGACGAGGATTGTATAAAGATTCTGAAA-AATTGT 1054
Query 957 TGGGAAAGTCTACCTGAAAAAGGGAA-AGTTATCATTGTAGAGTTGGTTACACCAAAGGA 1015
||| |||||||||| ||||||||||| | |||| ||||||||||| ||||||||||||||
Sbjct 1055 TGGAAAAGTCTACCGGAAAAAGGGAAGA-TTATTATTGTAGAGTTTGTTACACCAAAGGA 1113
Query 1016 ACCAATGAGTGGTGACTTATCCTCTAACACTGTGTTTGCCATGGATTTGTTGATGTTAAC 1075
||||| | ||||||||||||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct 1114 ACCAAAGGGTGGTGACTTATCTTCTAACACTGTCTTTGCCATGGACTTGTTGATGTTAAC 1173
Query 1076 ACAATGCTCGGGTGGTAAAGAGCGATCTCTTTCGCAGTTCGAGAATTTAGCGTTTGCGTC 1135
|||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||||
Sbjct 1174 CCAATGCTCTGGTGGTAAAGAGAGATCTCTTTCACAGTTCGAGAATTTGGCGTTTGCGTC 1233
Query 1136 TGGCTTTGATCGATGTGAAATCATATGTCTTGCCTATTCGTATTCTGTTATCGAATTTCA 1195
|| ||| ||||||||||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct 1234 AGGTTTTCTTCGATGTGAAATCATTTGTCTTGCTTATTCGTATTCTGTTATCGAATTCCA 1293
Query 1196 CAAATAAGATTTGGAATTTACGAAA 1220
||||||| |||||||||||| ||||
Sbjct 1294 CAAATAA-ATTTGGAATTTAAGAAA 1317
> AT1G77530.1 | Symbols: | O-methyltransferase family protein
| chr1:29136037-29137555 FORWARD LENGTH=1278
Length=1278
Score = 1362 bits (737), Expect = 0.0
Identities = 1034/1176 (88%), Gaps = 25/1176 (2%)
Strand=Plus/Plus
Query 57 ATGACAAACCATCTTCAAGATTCCTTAACCACTTACCCAAAACCGGTTTTAACCAAAGAA 116
||| ||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||
Sbjct 1 ATGTCAAACCATCTTCAAGATCCCTTAACCACTTACCCTAAACCGGGTTTAACCAAAGAA 60
Query 117 GAACAAGAAATCGACGAGAAAATGGTGAGTTTGCAAGCTGAGAGTATCGTGAACACCGTG 176
||||||||||||||||||||||||||||| |||||||| |||||||| || ||| |||||
Sbjct 61 GAACAAGAAATCGACGAGAAAATGGTGAGCTTGCAAGCGGAGAGTATAGTCAACGCCGTG 120
Query 177 GCCTTCCCTATGGTTCTCAAAGCCGCCTTCGAGCTTGGCGTCATCGACACCATCGCCGCT 236
|| ||||| |||||||||||||||||||| |||||||| ||||| || || ||||| |||
Sbjct 121 GCTTTCCCCATGGTTCTCAAAGCCGCCTTAGAGCTTGGAGTCATTGATACGATCGCTGCT 180
Query 237 GC-AGGAAACGGTACGTGGCTCTCACCGTATGAGATAGCGCG-TAGTCTCCCAACCAAAC 294
|| | | ||||| |||||||||||||||| ||||||||| || ||||||||||| |||||
Sbjct 181 GCTA-GCAACGGCACGTGGCTCTCACCGTCTGAGATAGC-CGTTAGTCTCCCAAACAAAC 238
Query 295 CCACCAACCCGGAGGCGCCGGTGTTACTGGACCGGTTGTTGCGCTTACTCGTCAGCCACT 354
|||| ||||||||||||||||| || ||||||||| || |||| ||||| || |||||||
Sbjct 239 CCACTAACCCGGAGGCGCCGGTATTGCTGGACCGGATGCTGCGGTTACTTGTAAGCCACT 298
Query 355 CGATCTTGAAGTGCCGTATGATTGAAACCGGAGAGAACGGTCAAACCGGAAAGATCGAGA 414
||||||||||||| ||||| |||||| | |||| || ||||||||||||||||||||||
Sbjct 299 CGATCTTGAAGTGTTGTATGGTTGAAAGCAGAGAAAATGGTCAAACCGGAAAGATCGAGA 358
Query 415 GGGTATATGCAGTC-GAACCGGTTTGCAAGTATTTTTTGAGAGATAGTGATGGATCGGGA 473
| |||||||||| | |||||| |||||||||| || |||| ||||||||| || || ||
Sbjct 359 GAGTATATGCAG-CTGAACCGATTTGCAAGTACTTCTTGAAAGATAGTGACGGCTCTGGT 417
Query 474 TCTCTCGT-GT-CTCTGTTCA-TGTTGCTCCATA-CCGAAGT-ATTTTTCAAGACTTGGA 528
|||||| | || || |||| | |||||||||||| || |||| | || |||| || ||||
Sbjct 418 TCTCTC-TCGTCCT-TGTT-ATTGTTGCTCCATAGCC-AAGTCA-TTCTCAAAACATGGA 472
Query 529 CAAATCTTAAAGATGTGATACTAGAAGGAAGAGATGCATTCAACTCTGCCCACGGCATGA 588
||||||| || ||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 473 CAAATCTCAAGGATGTGATACTAGAAGGAAAAGATGCATTCAGCTCTGCCCACGACATGA 532
Query 589 AAATTTTCGAATACATTAATTCGGATGAACAATTCGCTGAGTTGTTTAATCGTGCAATGT 648
| |||||||||| |||| ||||||||| || ||| || |||||||| | || |||||||
Sbjct 533 GACTTTTCGAATATATTAGTTCGGATGACCAGTTCTCTAAGTTGTTTCACCGCGCAATGT 592
Query 649 CGGAACCTTCCACCATGATCATGAAGAAGGTTCTAGAACTATACAGAGGATTCGAAGATG 708
||||| ||||||| ||| |||||||||||||||||||| |||||||||||| |||||||
Sbjct 593 CGGAATCTTCCACAATGGTCATGAAGAAGGTTCTAGAAGAATACAGAGGATTTGAAGATG 652
Query 709 TAAACACTTTGGTGGATGTTGGAGGAGGAAAT-GGCACCGTTTTAGGTCT-AGTCACTTC 766
| ||||||||||||||||| |||||||| || |||||| | |||||||| | |||||||
Sbjct 653 TTAACACTTTGGTGGATGTAGGAGGAGG-TATCGGCACCATATTAGGTCTCA-TCACTTC 710
Query 767 CAAGTATCCTCATATCAAAGGTGTTAATTTCGACTTAGCTCAAGTTTTAACCCAAGCTCC 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 CAAGTATCCTCATATCAAAGGTGTTAATTTCGACTTAGCTCAAGTTTTAACCCAAGCTCC 770
Query 827 TTTTTATCAAGGAGTCGAGCATGTA-CCTGGAGACATGTTTATAGAAGTTCCAAAGGGAG 885
|||||||| ||||||| ||||||| || |||||||||||||| ||||||||||| ||||
Sbjct 771 TTTTTATCCAGGAGTCAAGCATGTCTCC-GGAGACATGTTTATTGAAGTTCCAAAAGGAG 829
Query 886 ATGCTGTCTTTATGAAATGGATACTGCATGATTGGACCGACGAACATTGTATAAAGATTC 945
|||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct 830 ATGCCATCTTTATGAAATGGATACTACATGATTGGGGAGACGAGGATTGTATAAAGATTC 889
Query 946 T-AAAGAATTGTTGGGAAAGTCTACCTGAAAAAGGGAAAGTTATCATTGTAGAGTTGGTT 1004
| ||| ||||||||| |||||||||| |||||||| ||||| |||||||||||| || ||
Sbjct 890 TGAAA-AATTGTTGGAAAAGTCTACCGGAAAAAGGTAAAGTGATCATTGTAGAGATGATT 948
Query 1005 ACACCAAAGGAACCAATGAGTGGTGACTTATCCTCTAACACTGTGTTTGCCATGGATTTG 1064
||||||| |||||||| | | |||||| || | |||||| ||||| | |||||| |||
Sbjct 949 ACACCAATGGAACCAAAGCCTAATGACTTTTCGTGTAACACCGTGTTGGGCATGGACTTG 1008
Query 1065 TTGATGTTAACACAATGCTCGGGTGGTAAAGAGCGATCTCTTTCGCAGTTCGAGAATTTA 1124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1009 TTGATGTTAACACAATGCTCTGGTGGTAAAGAGCGATCTCTTTCGCAGTTCGAGAATTTA 1068
Query 1125 GCGTTTGCGTCTGGCTTTGATCGATGTGAAATCATATGTCTTGCCTATTCGTATTCTGTT 1184
||||||||||| |||||| || ||||||||||||||||||| | ||||| |||||||||
Sbjct 1069 GCGTTTGCGTCAGGCTTTCTTCTATGTGAAATCATATGTCTTTCTTATTCATATTCTGTT 1128
Query 1185 ATCGAATTTCACAAATAAG-ATTTGGAATTTACGAA 1219
|||||||| |||||||||| |||||||||| |||||
Sbjct 1129 ATCGAATTCCACAAATAAGGATTTGGAATTCACGAA 1164
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59939450730
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5