BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476918
Length=1267
Score E
Sequences producing significant alignments: (Bits) Value
AT1G77530.1 | Symbols: | O-methyltransferase family protein | ... 1731 0.0
AT1G77520.1 | Symbols: | O-methyltransferase family protein | ... 1332 0.0
AT5G53810.1 | Symbols: | O-methyltransferase family protein | ... 464 8e-130
> AT1G77530.1 | Symbols: | O-methyltransferase family protein
| chr1:29136037-29137555 FORWARD LENGTH=1278
Length=1278
Score = 1731 bits (937), Expect = 0.0
Identities = 1153/1255 (92%), Gaps = 23/1255 (2%)
Strand=Plus/Plus
Query 1 ATGTTAAAGCATCTTCAAGAGCCCTTAACCACTTACCCAAAACCGGTTTTAACCAAAGAA 60
|||| ||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||||
Sbjct 1 ATGTCAAACCATCTTCAAGATCCCTTAACCACTTACCCTAAACCGGGTTTAACCAAAGAA 60
Query 61 GAGCAAGAAATCGAGGAGAAAATGGTGAGCTTGCAAGCGGAGAGTATCGTCAACTCTGTG 120
|| ||||||||||| |||||||||||||||||||||||||||||||| |||||| | |||
Sbjct 61 GAACAAGAAATCGACGAGAAAATGGTGAGCTTGCAAGCGGAGAGTATAGTCAACGCCGTG 120
Query 121 GCTTTCCCCATGGTTCTCAAAGCCGCCTTGGAGCTTGGAGTCATTGATACGATCGCTGCT 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 121 GCTTTCCCCATGGTTCTCAAAGCCGCCTTAGAGCTTGGAGTCATTGATACGATCGCTGCT 180
Query 181 ACTGGCAACGGCACGTGGCTCTCACCGTCTGAGATAGCGGTTAGTCTCCC-AACGAAACC 239
|| |||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||
Sbjct 181 GCTAGCAACGGCACGTGGCTCTCACCGTCTGAGATAGCCGTTAGTCTCCCAAAC-AAACC 239
Query 240 CACTAATCCGGAGGCGCCGGTATTACTGGACCGGATGCTGCGATTACTTGTCAGCCACTC 299
|||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||
Sbjct 240 CACTAACCCGGAGGCGCCGGTATTGCTGGACCGGATGCTGCGGTTACTTGTAAGCCACTC 299
Query 300 GATCTTGAAGTGCCGTCTGATTGAAA-CAAGAGAAAATGGTCAAACCGGAAAGATCGAGA 358
|||||||||||| || || |||||| | |||||||||||||||||||||||||||||||
Sbjct 300 GATCTTGAAGTGTTGTATGGTTGAAAGC-AGAGAAAATGGTCAAACCGGAAAGATCGAGA 358
Query 359 GGGTATATGCAGCTGAACCGATTTGCAAGTTTTTCTTGAAAGATAGTGACGGCTCCGGTT 418
| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 359 GAGTATATGCAGCTGAACCGATTTGCAAGTACTTCTTGAAAGATAGTGACGGCTCTGGTT 418
Query 419 CTCTCTCGTCTTTGCTCTTGTTGCTCCATAGCCAAGTCATTCTCAAAACTTGGACAAATC 478
|||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 419 CTCTCTCGTCCTTGTTATTGTTGCTCCATAGCCAAGTCATTCTCAAAACATGGACAAATC 478
Query 479 TCAAGGATGTGATATTAGAAGGAAGAGATGCATTCAGCTCTGCCCACGACATGAGACTTT 538
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 479 TCAAGGATGTGATACTAGAAGGAAAAGATGCATTCAGCTCTGCCCACGACATGAGACTTT 538
Query 539 TCGAATACATTAGTTCTGATGAACAGTTCGCTGAGTTGTTTCACCGGGCCATGTCGGAAT 598
||||||| |||||||| ||||| |||||| || ||||||||||||| || ||||||||||
Sbjct 539 TCGAATATATTAGTTCGGATGACCAGTTCTCTAAGTTGTTTCACCGCGCAATGTCGGAAT 598
Query 599 CTTCCACTATGGTCATGAAAAAAGTTCTACAAGTATACAGAGGATTTGAAGATGTTAACA 658
||||||| ||||||||||| || |||||| ||| ||||||||||||||||||||||||||
Sbjct 599 CTTCCACAATGGTCATGAAGAAGGTTCTAGAAGAATACAGAGGATTTGAAGATGTTAACA 658
Query 659 CTTTGGTGGATGTCGGAGGAGGAT-TTGGAACCATATTAGGTCT-AGTCACTTCCAAGTA 716
||||||||||||| |||||||| | | || |||||||||||||| | |||||||||||||
Sbjct 659 CTTTGGTGGATGTAGGAGGAGG-TATCGGCACCATATTAGGTCTCA-TCACTTCCAAGTA 716
Query 717 TCCTCATATCAAAGGTGTTAATTTCGACTTAGCTCAGGTCTTAACTCATGCTCCTTTTTC 776
|||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||
Sbjct 717 TCCTCATATCAAAGGTGTTAATTTCGACTTAGCTCAAGTTTTAACCCAAGCTCCTTTTTA 776
Query 777 TCCAGGAGTTGAGCATGTCTCCGGAGACATGTTTATTGAAGTTCCAAAGGGAGATGCCAT 836
||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 777 TCCAGGAGTCAAGCATGTCTCCGGAGACATGTTTATTGAAGTTCCAAAAGGAGATGCCAT 836
Query 837 CTTTATGAAATGGATACTACATGATTGGGGGGATGAGCATTGTATAAAGATTTTAAAAAA 896
|||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||||
Sbjct 837 CTTTATGAAATGGATACTACATGATTGGGGAGACGAGGATTGTATAAAGATTCTGAAAAA 896
Query 897 TTGTTGGAAAAGTCTACCTGAAAAAGGTAAAGTGATCATTGTAGAGATGATTACACCAAT 956
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 897 TTGTTGGAAAAGTCTACCGGAAAAAGGTAAAGTGATCATTGTAGAGATGATTACACCAAT 956
Query 957 GGAACCAAAGCCTAATGACTTTTCCTCTAACACTGTGTTGGGCATGGACTTGTTGATGTT 1016
|||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||
Sbjct 957 GGAACCAAAGCCTAATGACTTTTCGTGTAACACCGTGTTGGGCATGGACTTGTTGATGTT 1016
Query 1017 AACACAATGCTCCGGCGGTAAAGAGCGATCTCTTTCGCAGTTCGAGAATTTGGCGTTTGC 1076
|||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1017 AACACAATGCTCTGGTGGTAAAGAGCGATCTCTTTCGCAGTTCGAGAATTTAGCGTTTGC 1076
Query 1077 GTCAGGCTTTCTTCGATGTGAAATCATATGTCTTGCTTATTCATATTCTGTTATCGAATT 1136
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1077 GTCAGGCTTTCTTCTATGTGAAATCATATGTCTTTCTTATTCATATTCTGTTATCGAATT 1136
Query 1137 CCATAGATAAG-ATTTGGAATAT-ACAAAATCAAATTACAGGTTAAGTTTTCTTTGTCAA 1194
||| | ||||| ||||||||| | || || || | ||| | |||||||||||| ||||
Sbjct 1137 CCACAAATAAGGATTTGGAAT-TCACGAATTCTGCT-ACATGCTAAGTTTTCTTT-TCAA 1193
Query 1195 TATTGTGGTTATTGTTTAGTGTATTATTATTAAGAGATTGTAATAATAATTGTGA 1249
| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 1194 ----G-----ATTGTTTAGTGTATTAT-ATTAACAGATTGTAATAATAATTGTGA 1238
> AT1G77520.1 | Symbols: | O-methyltransferase family protein
| chr1:29130403-29132180 FORWARD LENGTH=1473
Length=1473
Score = 1332 bits (721), Expect = 0.0
Identities = 1016/1159 (88%), Gaps = 17/1159 (1%)
Strand=Plus/Plus
Query 6 AAAGCATCTTCAAGAGCCCTTAACC-ACTTACCCAAAACCGGTTTTAACCAAAGAAGAGC 64
||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||| |
Sbjct 160 AAACCATCTTCAAGATCCCTT-ACCTACTTACCCAAAACCGGTTTTAACCAAAGAAGAAC 218
Query 65 AAGAAATCGAGGAGAAAATGGTGAGCTTGCAAGCGGAGAGTATCGTCAACTCTGTGGCTT 124
||||| | || ||||||||||| ||||||||||| ||||||||||| ||| | |||||||
Sbjct 219 AAGAAGTGGACGAGAAAATGGTAAGCTTGCAAGCAGAGAGTATCGTGAACACCGTGGCTT 278
Query 125 TCCCCATGGTTCTCAAAGCCGCCTTGGAGCTTGGAGTCATTGATACGATCGCTGCTACTG 184
|||| |||||||||||||||||||| |||||||| ||||| || || ||||||||| | |
Sbjct 279 TCCCTATGGTTCTCAAAGCCGCCTTCGAGCTTGGCGTCATCGACACCATCGCTGCTGCAG 338
Query 185 GCAACGGCACGTGGCTCTCACCGTCTGAGATAGCGGT-TAGTCTCCCAACGAAACCCACT 243
| |||| ||||||||||||||||| ||||||||| || |||||||||||| ||||||||
Sbjct 339 GAAACGACACGTGGCTCTCACCGTGTGAGATAGC-GTGTAGTCTCCCAACCAAACCCACC 397
Query 244 AATCCGGAGGCGCCGGTATTACTGGACCGGATGCTGCGATTACTTGTCAGCCACTCGATC 303
|| |||||||||||||| || || |||||||||||| | |||||||||||||||||||||
Sbjct 398 AACCCGGAGGCGCCGGTGTTGCTTGACCGGATGCTGAGCTTACTTGTCAGCCACTCGATC 457
Query 304 TTGAAGTGCCGTCTGATTGAAACAAGAGAAAATGGTCAAACCGGAAAGATCGAGAGGGTA 363
|||||||||||| |||||||||| |||| || |||| ||||||||||||||||||||||
Sbjct 458 TTGAAGTGCCGTATGATTGAAACCGGAGAGAACGGTCGAACCGGAAAGATCGAGAGGGTA 517
Query 364 TATGCAGCTGAACCGATTTGCAAGT-TTTTCTTGAAAGATAGTGACGGCT-CCGGTTCTC 421
|||||||| |||||| ||||||||| |||| |||| ||||||||| || | | || ||||
Sbjct 518 TATGCAGCCGAACCGGTTTGCAAGTATTTT-TTGAGAGATAGTGATGG-TACAGGATCTC 575
Query 422 TC-TCGTCTTTGCTCTTGTTGCTCCATAGCCAAGTCATTCTCAAAACTTGGACAAATCTC 480
|| | | || || || |||||||||||| |||||| || |||| ||||||||||||||
Sbjct 576 TCGT-GCCTCTGTTCATGTTGCTCCATACCCAAGTGTTTTTCAAGACTTGGACAAATCTT 634
Query 481 AAGGATGTGATATTAGAAGGAAGAGATGCATTCAGCTCTGCCCACGACATGAGACTTTTC 540
|| ||||||||| ||||||||||||||||||||| ||||||||||| ||||| | | |||
Sbjct 635 AAAGATGTGATACTAGAAGGAAGAGATGCATTCAACTCTGCCCACGGCATGAAAATCTTC 694
Query 541 GAATACATTAGTTCTGATGAA-CAGTTCGCTGAGTTGTTTCACCGGGCCATGTCGGAATC 599
|||||||| | ||| ||| || || || |||||||||||| | || || ||||||||| |
Sbjct 695 GAATACATAAATTCGGATCAACCA-TTTGCTGAGTTGTTTAATCGTGCAATGTCGGAACC 753
Query 600 TTCCACTATGGTCATGAAAAAAGTTCTACAAGTATACAGAGGATTTGAAGATGTTAACAC 659
|||||| ||| ||||||| || |||||| | ||||| |||||||||||||||||||||||
Sbjct 754 TTCCACCATGATCATGAAGAAGGTTCTAGACGTATATAGAGGATTTGAAGATGTTAACAC 813
Query 660 TTTGGTGGATGTCGGAGGAGGATTTGGAACCATATTAGGTCTAGTCACTTCCAAGTATCC 719
|||||||||||| ||||||||| ||| || | |||||| |||||||||| ||||||||
Sbjct 814 TTTGGTGGATGTTGGAGGAGGAAATGGCACTGTTTTAGGTTTAGTCACTTCTAAGTATCC 873
Query 720 TCATATCAAAGGTGTTAATTTCGACTTAGCTCAGGTCTTAACTCATGCTCCTTTTTCTCC 779
||||||||||||||||||||||||||||||||| || ||||| || |||||||||| |||
Sbjct 874 TCATATCAAAGGTGTTAATTTCGACTTAGCTCAAGTTTTAACCCAAGCTCCTTTTTATCC 933
Query 780 AGGAGTTGAGCATGTCTCCGGAGACATGTTTATTGAAGTTCCAAAGGGAGATGCCATCTT 839
|||||| |||||||| || |||||||||||| | ||||||||||||||||||||| ||||
Sbjct 934 AGGAGTCGAGCATGTATCTGGAGACATGTTTGTAGAAGTTCCAAAGGGAGATGCCGTCTT 993
Query 840 TATGAAATGGATACTACATGATTGGGGGGATGAGCATTGTATAAAGATTTTAAAAAATTG 899
||||||||||||||||||||||||||| || ||| |||||||||||||| | ||||||||
Sbjct 994 TATGAAATGGATACTACATGATTGGGGAGACGAGGATTGTATAAAGATTCTGAAAAATTG 1053
Query 900 TTGGAAAAGTCTACCTGAAAAAGGTAA-AGTGATCATTGTAGAGAT-GATTACACCAATG 957
||||||||||||||| |||||||| || | | || ||||||||| | | ||||||||| |
Sbjct 1054 TTGGAAAAGTCTACCGGAAAAAGGGAAGATT-ATTATTGTAGAGTTTG-TTACACCAAAG 1111
Query 958 GAACCAAAGCCTAATGACTTTTCCTCTAACACTGTGTTGGGCATGGACTTGTTGATGTTA 1017
||||||||| | |||||| || ||||||||||| || | |||||||||||||||||||
Sbjct 1112 GAACCAAAGGGTGGTGACTTATCTTCTAACACTGTCTTTGCCATGGACTTGTTGATGTTA 1171
Query 1018 ACACAATGCTCCGGCGGTAAAGAGCGATCTCTTTCGCAGTTCGAGAATTTGGCGTTTGCG 1077
|| |||||||| || ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1172 ACCCAATGCTCTGGTGGTAAAGAGAGATCTCTTTCACAGTTCGAGAATTTGGCGTTTGCG 1231
Query 1078 TCAGGCTTTCTTCGATGTGAAATCATATGTCTTGCTTATTCATATTCTGTTATCGAATTC 1137
||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1232 TCAGGTTTTCTTCGATGTGAAATCATTTGTCTTGCTTATTCGTATTCTGTTATCGAATTC 1291
Query 1138 CATAGATAAGATTTGGAAT 1156
|| | |||| |||||||||
Sbjct 1292 CACAAATAA-ATTTGGAAT 1309
> AT5G53810.1 | Symbols: | O-methyltransferase family protein
| chr5:21850179-21853011 REVERSE LENGTH=1536
Length=1536
Score = 464 bits (251), Expect = 8e-130
Identities = 808/1065 (76%), Gaps = 86/1065 (8%)
Strand=Plus/Plus
Query 130 ATGGTTCTCAAAGCCGCCTTGGAGCTTGGAGTCATTGATACGATCGCTGCTACT-GGCA- 187
|||||||||||||||||||||||||| || || || || || ||| | | | | || |
Sbjct 367 ATGGTTCTCAAAGCCGCCTTGGAGCTCGGCGTGATCGACACCATCACCAC-AGTAGG-AG 424
Query 188 ACGGC-A--CGTGGCTCTCACCGTCTGAGATAGCGGTTAGTCTCCCAACGAAACCCACT- 243
||| | |||||||||||| ||||| ||||| | || |||||||| ||| ||| |
Sbjct 425 GTGGCGATTTGTGGCTCTCACCTTCTGAAATAGCACTAAGACTCCCAACCAAA-CCA-TG 482
Query 244 -AATCC-GGAGGCGCCGG-TATTACTGGACCGGATGCTGCGATTACTTGTCAGCCACTCG 300
|| || ||| || |||| | || || ||||| ||||| ||||| || |||||||| |||
Sbjct 483 CAA-CCTGGAAGCTCCGGCT-TTGCTAGACCGTATGCTTCGATTTCTCGTCAGCCATTCG 540
Query 301 ATCTTGAAGTGCCGT-CTGATTGAA-ACAAGAGAAAATGGTCAAACCGG-AAAGATCGAG 357
|||| || |||||| ||| | || | ||||| || ||||||||||| |||| | |||
Sbjct 541 GTCTTAAAATGCCGTACTG--T-AATAGAAGAG--AACGGTCAAACCGGAAAAG-TTGAG 594
Query 358 AGGGTATATGCAGCTGAACCGATTTGCAAGTTTTTCTTGAA-AGATAGTGACG--G-CTC 413
||||||||||||||||||||| | ||||| | | ||||||| | | ||||||| | |||
Sbjct 595 AGGGTATATGCAGCTGAACCGGTCTGCAAATATCTCTTGAACA-AAAGTGACGACGTCTC 653
Query 414 CGGTTCTCTCTCGTCTTTGCTCTTGT-TGC-T--CCAT-AGCCAAGTCA-TTCTCAAAAC 467
|||||| | | | | | |||||| | ||| | || | ||| | || | || |||| ||
Sbjct 654 GGGTTCT-T-TTG-CATCGCTCTT-TATGCTTGACC-TCAGCGACGT-ATTTATCAAGAC 707
Query 468 TTGGACAAATCTC-AAGGATGTGATATTAGAAGGAAGAGATGCATTCAGCTCTGCCCACG 526
|||||| ||||| || ||||||||||||||||||||||||||||| || |||||||| |
Sbjct 708 ATGGACACATCTCGAA-GATGTGATATTAGAAGGAAGAGATGCATTTAGTTCTGCCCATG 766
Query 527 ACATGAGACTTTTCGAATACATT-A-GTTCTGATGAAC-AGTTCGCTGA-GTTGTTTCAC 582
|||| ||| ||||||||||| | | | ||||| | | || | | | || |||| ||
Sbjct 767 GGATGAAACTATTCGAATACATCCAAGC-C-GATGAGCGATTTGG-TAAAGT-GTTTAAC 822
Query 583 CGGGCCATGTCGGAATCTTCCACTATGGTCATGAAAAAAGTTCT-ACAAGTATACAGA-G 640
||||| |||| |||||||||||| ||||| | | | || ||||| | || | || || |
Sbjct 823 CGGGCTATGTTGGAATCTTCCACCATGGTTACGGAGAAGGTTCTTA-AATTTTAT-GAAG 880
Query 641 GATTTGAAGATGTTAACACTTTGGTGGATGTCGGAGGAGGATTTGG-AACCATATTAGGT 699
|||| ||||||| || |||||||||||||| || |||||| |||| ||| | | |||||
Sbjct 881 GATTCAAAGATGTGAAGACTTTGGTGGATGTAGGGGGAGGACTTGGCAAC-ACACTAGGT 939
Query 700 CT-AGTCACTTCCAAGTATCCTCATATCAAAGGTGTTAATTTCGACTTAGCTCAGGTCTT 758
|| | |||||||||||||||||||| | | ||| | |||||||| ||||||| ||| ||
Sbjct 940 CTCA-TCACTTCCAAGTATCCTCATCTTATTGGTATCAATTTCGATTTAGCTCCGGTGTT 998
Query 759 AACTCA-TGCTCCTTTTTCTCCAGGAGTTGAGC-ATGTCTCCGGAGACATGTTTATTGAA 816
| | || ||||| || || ||| || || || | |||| | || || ||||| || ||
Sbjct 999 AGC-CAATGCTCATTCTTATCCCGGTGT-GAACCATGTGGCTGGTGATATGTTCATC-AA 1055
Query 817 G-TTCCAAAGGGAGATGCCATCTTT-ATGAAATGGATACTACATGATTGGGGGGATGAGC 874
| |||||||||| |||||||| ||| ||||| |||||||||||||||||| ||| || |
Sbjct 1056 GATTCCAAAGGGGGATGCCAT-TTTCATGAAGTGGATACTACATGATTGGACGGACGAAC 1114
Query 875 ATTGTATAA-AGATT-TTAAAAAATTGTTGGAAAAGTCTACCT-GAAAAAGGTAAAGTGA 931
| || || | ||| ||||||| | ||||||||||||| | ||||| || ||| |||
Sbjct 1115 AATGCGTAGCA-ATTCTTAAAAACT-GTTGGAAAAGTCT-CGAAGAAAATGGAAAACTGA 1171
Query 932 TCATTGTAGAGATGATTACACCAATGGAACCAAAGC-CTAATGACTTT-TCCTCTAACAC 989
| || || || ||| ||||||| ||||| ||||| | | || | | | |||||||
Sbjct 1172 TAATAGTGGAAATGGTTACACCGGTGGAAGCAAAGAGCGGA-GA-TATATGTTCTAACAT 1229
Query 990 TGTGTTGGGCATGGACTTGTTGATGTTAACACAATGCTCCGGCGGTAAAGAGCGA--TCT 1047
|||||| || |||||| || |||||||||||||| || || ||||||||| || |||
Sbjct 1230 TGTGTTTGGTATGGACATGACAATGTTAACACAATGTTCAGGTGGTAAAGAGAGAGATCT 1289
Query 1048 CTTTCGCAGTTCGAGAATTTGGCGTTTGCGTCAGGCTTT-CTTCGATGTGAAATCATATG 1106
|| | | |||| || ||||| || | ||| || || ||| || || |||| |||| ||||
Sbjct 1290 CTAT-G-AGTTTGAAAATTTAGCATATGCATCGGGTTTTTCT-CGTTGTGCAATCGTATG 1346
Query 1107 T-CTTGCTTATTCATATTCTGTTATCGAATTCCATAGATAAGATT 1150
|| | |||| ||| ||| || |||||| || | | ||| ||||
Sbjct 1347 CGCT-GTTTATCCATTTTCCGTCATCGAAATCTACAAATA-GATT 1389
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62298876345
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5