BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476933
Length=1669
Score E
Sequences producing significant alignments: (Bits) Value
AT1G77690.1 | Symbols: LAX3 | like AUX1 3 | chr1:29200941-29203... 1469 0.0
AT2G21050.1 | Symbols: LAX2 | like AUXIN RESISTANT 2 | chr2:903... 553 2e-156
AT5G01240.1 | Symbols: LAX1 | like AUXIN RESISTANT 1 | chr5:978... 431 1e-119
AT2G38120.1 | Symbols: AUX1, WAV5, PIR1, MAP1 | Transmembrane a... 263 4e-69
> AT1G77690.1 | Symbols: LAX3 | like AUX1 3 | chr1:29200941-29203340
REVERSE LENGTH=1727
Length=1727
Score = 1469 bits (795), Expect = 0.0
Identities = 840/862 (97%), Gaps = 1/862 (0%)
Strand=Plus/Plus
Query 1 AGAGAAGAAGATAAAAATGGCGGCAGAGAAAATAGAGACAGTGGTCGCAGGGAATTACTT 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8 AGAGAAGAAGAGAAAAATGGCGGCAGAGAAAATAGAGACAGTGGTCGCAGGGAATTACTT 67
Query 61 GGAAATGGAGAGAGAAGAAGAAAACATAAGTGGTAACAATAAATCTTCAGCTAAAACAAA 120
||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 68 AGAAATGGAGAGGGAAGAAGAAAACATAAGTGGTAACAAGAAATCTTCAACTAAAACAAA 127
Query 121 ACTTTCCAACTTCTTCTGGCATGGAGGTTCTGTCTACGATGCTTGGTTTAGTTGTGCTTC 180
||| || || |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 128 ACTCTCTAATTTCTTCTGGCATGGTGGTTCTGTCTACGATGCTTGGTTTAGTTGTGCTTC 187
Query 181 AAATCAGGTGGCACAAGTTCTGTTGACATTACCGTACTCGTTCTCACAACTTGGGATGGT 240
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 188 AAATCAGGTGGCACAAGTTCTGTTGACATTACCATACTCGTTCTCACAACTTGGGATGAT 247
Query 241 GTCGGGAATTTTGTTTCAACTCTTTTATGGACTAATGGGAAGTTGGACTGCTTATCTCAT 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 248 GTCGGGAATTTTGTTTCAACTCTTTTATGGATTAATGGGAAGTTGGACTGCTTATCTCAT 307
Query 301 TAGTGTTCTTTACGTTGAATATCGAACTCGTAAAGAACGAGAAAAATTCGATTTCCGTAA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 308 TAGTGTTCTTTACGTTGAATATCGAACTCGTAAAGAACGAGAAAAATTCGATTTCCGTAA 367
Query 361 TCACGTTATTCAGTGGTTTGAGGTGTTAGATGGATTGTTGGGGAAACATTGGAGGAACCT 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 CCACGTTATTCAGTGGTTTGAGGTGTTAGATGGATTGTTGGGGAAACATTGGAGGAACCT 427
Query 421 TGGATTGATCTTTAACTGCACTTTTCTTCTCTTTGGATCCGTTATTCAGCTCATTGCTTG 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 428 TGGATTGATCTTTAACTGCACTTTTCTTCTCTTTGGATCTGTTATTCAGCTCATTGCTTG 487
Query 481 TGCTAGCAATATATATTATATTAATGACAAATTGGACAAGAGGACATGGACATACATATT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 488 TGCTAGCAATATATATTATATTAATGACAAATTGGACAAGAGGACATGGACATACATATT 547
Query 541 TGGGGCGTGTTGTGCAACAACTGTTTTTATTCCTTCCTTCCACAATTATAGAATTTGGTC 600
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 548 TGGGGCGTGCTGTGCAACAACTGTTTTTATTCCTTCCTTCCACAATTATAGAATTTGGTC 607
Query 601 ATTCCTCGGACTCGCTATGACCACTTACACTTCTTGGTATCTCACCATTGCTTCACTCCT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 608 ATTCCTCGGACTCGCTATGACCACTTACACTTCTTGGTATCTCACCATTGCTTCACTCCT 667
Query 661 TCATGGCCAGGCTGAGGATGTGAAACACTCGGGTCCAACCACAATGGTGCTTTACTTCAC 720
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 668 TCATGGCCAGGCTGAGGATGTGAAACACTCTGGTCCAACCACAATGGTGCTTTACTTCAC 727
Query 721 CGGAGCCACCAACATTCTCTATACCTTCGGTGGACACGCCGTCACAGTGGAGATAATGCA 780
||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 728 CGGAGCCACCAACATTCTCTACACCTTTGGTGGCCACGCCGTCACAGTGGAGATAATGCA 787
Query 781 CGCGATGTGGAAACCACAAAAGTTCAAGGCGATATATCTAACTAGCGACCATATATGTAC 840
||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 788 CGCTATGTGGAAACCGCAAAAGTTCAAGGCGATATATCTA-CTAGCGACCATATATGTAC 846
Query 841 TAACGCTAACGCTACCATCCGC 862
||||||||||||||||||||||
Sbjct 847 TAACGCTAACGCTACCATCCGC 868
Score = 1262 bits (683), Expect = 0.0
Identities = 769/809 (95%), Gaps = 12/809 (1%)
Strand=Plus/Plus
Query 863 CTACTAACTCATTCCAATGCGCTCTCTCTTCTCCCTAAGTCCGGTTTTAGAGATACCGCA 922
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 900 CTACTAACTCATTCCAATGCGCTCTCTCTTCTCCCTAAGACTGGTTTTAGAGATACCGCA 959
Query 923 GTGATCCTCATGCTCATTCATCAGTTTATAACATTCGGATTCGCATCTACACCGTTATAT 982
||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 960 GTGATCCTCATGCTCATTCATCAATTTATAACGTTCGGATTCGCGTCTACACCGTTATAT 1019
Query 983 TTTGTGTGGGAAAAATTGATAGGTGTGCATGAGACGAAGAGCATGTTCAAAAGAGCCATG 1042
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 TTTGTGTGGGAGAAATTGATAGGTGTGCATGAGACGAAGAGCATGTTCAAAAGAGCCATG 1079
Query 1043 GCTAGATTACCCGTGGTTGTACCCATATGGTTCTTAGCCATTATCTTCCCCTTTTTCGGA 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 GCTAGATTACCCGTGGTTGTACCCATATGGTTCTTAGCCATTATCTTCCCCTTTTTCGGA 1139
Query 1103 CCAATCAATTCCGCCGTCGGATCTCTCTTAGTTAGCTTCACTGTATACATCATCCCCGCA 1162
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1140 CCAATCAATTCCGCGGTCGGATCTCTCTTAGTTAGCTTCACTGTCTACATCATCCCCGCA 1199
Query 1163 TTGGCTCATATGCTTACCTTTGCTCCTGCTCCTTCAAGAGAGAACGCGGTGGAGAGACCA 1222
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1200 TTGGCTCATATGCTTACCTTTGCTCCTGCTCCTTCAAGAGAGAATGCGGTGGAGAGGCCA 1259
Query 1223 CCGCGAGTGGTGGGAGGATGGATGGGGACTTATTGCATAAACATATTTGTGGTGGTTTGG 1282
||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1260 CCGAGAGTGGTAGGAGGATGGATGGGGACTTACTGCATAAACATATTTGTGGTGGTTTGG 1319
Query 1283 GTATTCGTAGTTGGGTTCGGGTTCGGAGGATGGGCAAGTATGGTCAACTTTGTTCGCCAG 1342
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1320 GTATTCGTAGTTGGGTTCGGGTTTGGAGGATGGGCAAGTATGGTCAACTTTGTTCGCCAG 1379
Query 1343 ATCGACACTTTTGGTCTCTTTACTAAATGCTACCAATGCCCTCCTCACAAGCCATGATAT 1402
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1380 ATCGACACTTTTGGTCTCTTTACCAAATGCTACCAATGCCCTCCTCACAAGCCATGATAT 1439
Query 1403 ACAAATTTGCCATTCAAGACCTTCTAGAAAGAGAGTTTCATCTGAGTGGGTTTTGTTTTC 1462
||||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||
Sbjct 1440 ACAAATTTGCCATTCAAGACCTTCTAGAAAGAGAGTTTCATATAAGGGGGTTTTGATTTC 1499
Query 1463 GAAATCTAATACATATAAGTTATTATATCCA-TTTTTT---AGTATTTATTAAAAATCAC 1518
|| |||||||| |||||||||| || ||||| |||||| |||||||||||||||||||
Sbjct 1500 GAGATCTAATATATATAAGTTACTACATCCAATTTTTTTTTAGTATTTATTAAAAATCAC 1559
Query 1519 ATCTCTTTGTAATTGTTTGACGACAATAATCTTTTACTTCGttttttttttttttaattt 1578
||||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||
Sbjct 1560 ATCTCTTTGTAATTGTTTGACGACAATAATCTTTTACCTCGGGTTTGTTT-----AATTT 1614
Query 1579 gttatgttgagttgtttttggtaaattgggtttttttttttgTTCCTTAGTTAAGGTGTG 1638
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1615 GTTATGTTGAGTTATTTTTGGTAAATTGGGTTTTTTTT---GTTCCTTAGTTAAGGTGTG 1671
Query 1639 ATGGCTATCTTAGGCCAACCCTATTATTA 1667
|||||||||||||||||||||||||||||
Sbjct 1672 ATGGCTATCTTAGGCCAACCCTATTATTA 1700
> AT2G21050.1 | Symbols: LAX2 | like AUXIN RESISTANT 2 | chr2:9034090-9036636
FORWARD LENGTH=1848
Length=1848
Score = 553 bits (299), Expect = 2e-156
Identities = 596/735 (81%), Gaps = 37/735 (5%)
Strand=Plus/Plus
Query 137 TGGCATGGAGGTTCTGTC-TACGATGCTTGGTTTAGTTGTGCTTCAAATCAGGTGGCACA 195
|||||||| || |||| | || ||||||||||| || |||||||| ||||||||||||||
Sbjct 308 TGGCATGGTGGCTCTG-CTTATGATGCTTGGTTCAGCTGTGCTTCCAATCAGGTGGCACA 366
Query 196 AGTTCTGTTGACATTACCGTACTCGTTCTCACAACTTGGGATGGTGTC-GGGAATTTTGT 254
||| ||||||||| | || |||||||||||||| || |||||| | || ||| ||| |||
Sbjct 367 AGTGCTGTTGACACTGCCATACTCGTTCTCACAGCTGGGGATGCTCTCAGGG-ATTCTGT 425
Query 255 TTCAACTCTTTTATGGAC-TAATGGGAAGTTGGACTGCTTATCTCATTAGTGTTCTTTAC 313
|||| ||||||||||| | | | || |||||||||||||| ||||| ||| |||| ||
Sbjct 426 TTCAGCTCTTTTATGG-CATCTTAGGTAGTTGGACTGCTTACCTCATCAGTATTCTCTAT 484
Query 314 GTTGAATATC-GAACTC-GTAAA-GAACGAGA-AAAATTCGATTTCCGTAATCACGTTAT 369
|||||||| | |||| | | ||| ||| |||| ||| || | ||| | || || || ||
Sbjct 485 GTTGAATA-CAGAAC-CAG-AAAGGAAAGAGAGAAAGTT-AACTTCAGAAACCATGTCAT 540
Query 370 TCAGTGGTTTGAGG-TGTTAGATGGATTG-TTGGGGAAACATTGGAGGAACCTTGGATTG 427
|||||||||||||| | || ||||||||| || ||||| ||||||||||| |||| ||
Sbjct 541 TCAGTGGTTTGAGGTTCTT-GATGGATTGCTT-GGGAAGCATTGGAGGAATGTTGG-TTT 597
Query 428 A-TCTTTAACTGCACTTTTCTTCTCTTTGGATCCGTTATTCAGCTCATTGCTTGTGCTAG 486
| |||||||||||| || |||||||||||||| || ||||| ||||| |||||||| ||
Sbjct 598 AGCCTTTAACTGCACCTTCCTTCTCTTTGGATCTGTCATTCAACTCATAGCTTGTGCCAG 657
Query 487 CAATATATATTATATTAATGACAAAT-TGGACAAGAGGACATGGACATACATATTTGGGG 545
||| |||||||| || ||||| ||| ||||||||||||||||||||||||||||||| |
Sbjct 658 CAACATATATTACATAAATGA-TAATCTGGACAAGAGGACATGGACATACATATTTGGAG 716
Query 546 CGTGTTGTGCAACAACTGTTTTTATTCCTTCCTTCCACAATTATAGAATTTGGTCATTCC 605
| ||||||||||| || || |||||||||||||||||||| || || || ||||| || |
Sbjct 717 CATGTTGTGCAACCACAGTCTTTATTCCTTCCTTCCACAACTACAGGATCTGGTCTTTTC 776
Query 606 TCGGACTCGCT-ATGACCACTTACACTTCTTGGTATCTCACCATTGCTTC-ACTCCTTCA 663
| |||||| | ||||||||||||||| ||||||| ||||||||||| || | |||| ||
Sbjct 777 TTGGACTCT-TGATGACCACTTACACTGCTTGGTACCTCACCATTGCCTCTA-TCCTCCA 834
Query 664 TGGCCAGGCT-GA-GGATGTGAAACACTCGGGTCCAACCACAA-TGGTGCTT-TACTTCA 719
||| |||| | || ||| ||||| || || || |||| || | |||| || |||||||
Sbjct 835 TGGACAGG-TAGAAGGA-GTGAAGCATTCAGGACCAAGCA-AGCTGGTT-TTATACTTCA 890
Query 720 CCGGAGCCACCAACATTCTCTATACCTTCGGTGGACACGCCGTCACAGTGGAGATAATGC 779
| || ||||| |||||||| || || ||||||||||| || || || || ||||||||||
Sbjct 891 CAGGGGCCACAAACATTCTTTACACATTCGGTGGACATGCTGTTACTGTAGAGATAATGC 950
Query 780 ACGCGATGTGGAAACCACAAAAGTTCAAGGCGATATATCTAACTAGCGAC-CATATATGT 838
| || ||||||||||| || ||||||||| | ||||| || | || || | | || ||
Sbjct 951 ATGCTATGTGGAAACCTCAGAAGTTCAAGTCCATATACCTGTTT-GCAACAC-TCTACGT 1008
Query 839 ACTAACGCTAACGCT 853
|| |||||||||||
Sbjct 1009 GCTGACGCTAACGCT 1023
> AT5G01240.1 | Symbols: LAX1 | like AUXIN RESISTANT 1 | chr5:97894-101835
FORWARD LENGTH=2017
Length=2017
Score = 431 bits (233), Expect = 1e-119
Identities = 537/682 (79%), Gaps = 27/682 (4%)
Strand=Plus/Plus
Query 130 CTTCTTCTGGCATGGAGGTTCTGTC-TACGATGCTTGGTTTAGTTGTGCTTCAAATCAGG 188
|||| |||||||||| || || | | | || || |||||||| ||||| |||||||| |
Sbjct 343 CTTCCTCTGGCATGGCGGGTCCG-CTTGGGACGCCTGGTTTAGCTGTGCATCAAATCAAG 401
Query 189 TGGCACAAGTTCTGTTGACATTACCGTACTCGTTCTCACAACTTGGG-ATGGTGTCGGGA 247
|||||||||| |||||||| | ||||| |||||||| | | ||||| ||| | || |||
Sbjct 402 TGGCACAAGTGCTGTTGACGCTGCCGTATTCGTTCTCGC-AGTTGGGAATGTTATCAGGA 460
Query 248 ATTTTGTTTCAACTCTTTTATGGACTAATGGGAAGTTGGACTGCTTATCTCATTAGTGTT 307
|| ||| ||||| | || ||||| |||||||| |||||||||||||||||| ||||||
Sbjct 461 ATATTGCTTCAAATATTCTATGGGTTAATGGGATCTTGGACTGCTTATCTCATCAGTGTT 520
Query 308 CTTTACGTTGAATATCGAACTCGTA--AAG-AACGAGAA---AAATTCGATTTCCGTAAT 361
|||||||| || ||||| | |||| || ||| |||| ||| || ||| ||
Sbjct 521 CTTTACGTCGAGTATCGTGCCCGTATGGAGAAACAAGAAGCCAAA-TC--CTTCAAAAAC 577
Query 362 CACGTTATTCAGTGGTTTGAGGTG-TTAGATGGATTGTTGGGGAAACATTGG-AGGAACC 419
||||||||||| |||||||| ||| || ||||| || |||| | ||| | | | |
Sbjct 578 CACGTTATTCAATGGTTTGAAGTGCTT-GATGGGCTGCTGGGTCCGTACTGGAAAGCAGC 636
Query 420 TTGGATTGATC-TTTAACTGCACTTTTCTT-CTCTTTGGATCCGTTATTCAGCTCATTGC 477
|| | | | ||||| ||||| ||||| | || ||||| || || |||||||||||
Sbjct 637 GGGGCTCG--CATTTAATTGCAC-CTTCTTGTTATTCGGATCAGTCATCCAGCTCATTGC 693
Query 478 TTGTGCTAGCAATATATATTATATTAATGACAAATTGGACAAGAGGACATGGACATACAT 537
||||||||||||||||||||| || || || | || ||||||||||||||||| || ||
Sbjct 694 TTGTGCTAGCAATATATATTACATAAACGATAGGTTAGACAAGAGGACATGGACTTATAT 753
Query 538 ATTTGGGGCGTGTTGTGCAACAACTGTTTTTATTCCTTCCTTCCACAATTATAGAATTTG 597
||||||||| || ||||| || || ||||| || || || ||||||||||| | |||||
Sbjct 754 ATTTGGGGCTTGCTGTGCCACGACCGTTTTCATACCATCTTTCCACAATTACCGTATTTG 813
Query 598 GTCATTCCTCGGACTCG-CTATGACCACTTACACTTCTTGGTATCTCACCATTGCTTCAC 656
||| |||||||| || | | |||||||| ||||| ||||||| |||||||| || ||
Sbjct 814 GTCTTTCCTCGGCCTTGGC-ATGACCACCTACACCGCTTGGTACCTCACCATCGCCTCTT 872
Query 657 TCCTTCATGGCCAGGCTGAGGATGTGAAACACTCGGGTCCAACCACAA-TGGTGCTT-TA 714
| || ||||| ||||| |||| ||||| ||| || |||||||||| | | ||| || ||
Sbjct 873 TTCTCCATGGTCAGGCGGAGGGTGTGACACATTCCGGTCCAACCA-AGCTTGTG-TTGTA 930
Query 715 CTTCACCGGAGCCACCAACATTCTCTATACCTTCGGTGGACACGCCGTCACAGTGGAGAT 774
||| ||||||||||||||||| ||||||||||||||||||||||| || || ||||| ||
Sbjct 931 CTTTACCGGAGCCACCAACATCCTCTATACCTTCGGTGGACACGCTGTGACCGTGGAAAT 990
Query 775 AATGCACGCGATGTGGAAACCA 796
|||||| |||||||||||||||
Sbjct 991 AATGCATGCGATGTGGAAACCA 1012
> AT2G38120.1 | Symbols: AUX1, WAV5, PIR1, MAP1 | Transmembrane
amino acid transporter family protein | chr2:15972993-15977180
FORWARD LENGTH=2135
Length=2135
Score = 263 bits (142), Expect = 4e-69
Identities = 372/479 (78%), Gaps = 32/479 (7%)
Strand=Plus/Plus
Query 918 CCGCAGTGATCCTCATGCTCATTCATCAGTTTATAACATTCGGATTCGCATCTACACCGT 977
|||| || ||||||||||||||||||||||||||||| ||||| ||||| | |||||| |
Sbjct 1227 CCGCTGTTATCCTCATGCTCATTCATCAGTTTATAACGTTCGGGTTCGCTTGTACACCTT 1286
Query 978 TATATTTTGTGTGGGAAAAATTGATAGGTG-TGCATGAGACGAAGAGCATGTT-CAAAAG 1035
| || ||||||||||| ||| |||| || | ||||||| || |||||||| || | |||
Sbjct 1287 TGTACTTTGTGTGGGAGAAAGTGATTGG-GATGCATGACACAAAGAGCAT-TTGCTTAAG 1344
Query 1036 AGCCATGGCTAGATTACCCGTGGTTGTACCCATATGGTTCTTAGCCATTATCTTCCCCTT 1095
|| |||||||||| || ||||| |||| || ||||||||||| ||||||||||||||
Sbjct 1345 GGCTTTGGCTAGATTGCCTGTGGTCATACCTATTTGGTTCTTAGCTATTATCTTCCCCTT 1404
Query 1096 TTTCGGACCAATCAATTCCGCCGTCGGAT-CTCT-CTTAGTTAGCTTCACTGTATACATC 1153
|||||| |||||||||||||| ||||| | |||| ||| ||||||||||| || || |||
Sbjct 1405 TTTCGGTCCAATCAATTCCGCTGTCGG-TGCTCTTCTT-GTTAGCTTCACCGTCTATATC 1462
Query 1154 ATCCCCGCAT-TGGCTCATATGCTTACCTTTGC--TCCTGC-TCCT-TCAAGAGAGAACG 1208
||||| | | | ||||| ||||| || || | || ||| ||| || | |||| |
Sbjct 1463 ATCCCATC-TCTCGCTCACATGCTCAC-TTACCGATC-TGCCTCCGCTC--GTCAGAATG 1517
Query 1209 CGGTGGAGA-GACCACCGCGAGTGGTGG-GAGGATGGATGGGGACT-TAT-TGCATAAAC 1264
||| ||||| | |||||| | || ||| |||| || || | || || | ||
Sbjct 1518 CGGCGGAGAAG-CCACCGTTCTTTATGCCGAGC-TGGACGGCGA-TGTACGTGT-TGAAT 1573
Query 1265 ATATTT-GTGGTGGTTTGGGTA-TTCGTAGTTGGGTTCGGGTTCGGAGGATGGGCAAGTA 1322
||| |||||||||||||| || |||| || || |||||||| |||||||| |||
Sbjct 1574 GC-TTTCGTGGTGGTTTGGGTTCTTA-TAGTCGGATTTGGGTTCGGTGGATGGGCTAGTG 1631
Query 1323 TGGTCAACTTTGTTCGCCA-GATCGACACTTTTGGTCTCTTTACTAAATGCTACCAATG 1380
| |||||||||||| || | |||||||||||||||||||| | || || ||||||||
Sbjct 1632 TAACCAACTTTGTTCGTCAAG-TCGACACTTTTGGTCTCTTTGCCAAGTGTTACCAATG 1689
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82479495435
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5