BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476946
Length=5109
Score E
Sequences producing significant alignments: (Bits) Value
AT1G77800.1 | Symbols: | PHD finger family protein | chr1:2925... 4252 0.0
AT1G77810.1 | Symbols: | Galactosyltransferase family protein ... 86.1 3e-15
> AT1G77800.1 | Symbols: | PHD finger family protein | chr1:29253396-29260617
FORWARD LENGTH=4959
Length=4959
Score = 4252 bits (2302), Expect = 0.0
Identities = 2546/2658 (96%), Gaps = 39/2658 (1%)
Strand=Plus/Plus
Query 2460 CTAAAGCTAATGGATCAGTTTTGAAGAAAGAAGGAAGTGTGAGTTTGGCAACTGATCATT 2519
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 2326 CTAAAGCTAATGGATCAGTTTTGAAGAAAGAAGGAAGTGTTAGTTTGGCACCTGATCATT 2385
Query 2520 CTCCCGAAGAACCGAATTCAATAGTTCTTGATCAGGAAGTTCATCATGGGAAAAGTTCAG 2579
|||| |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 2386 CTCCAGAAGAAAAGAATTCAATAGTGCTTGATCAGAAAGTTCATCATGGGAAAAGTTCAG 2445
Query 2580 TTCTTCCCTCTGTAGATGATCATGGAGAACAATCAAACTCCAGTTCTTCTGGAGTCATGC 2639
|| || ||| | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2446 TTATT-CCT-TCT-GATGATCATGGAGAACAATCAAACTCCAGTTCTTCTGGAGTCATGA 2502
Query 2640 TGGAGAATGCCTTTTCCTTGGGGCCAAATAGTTCTCAGAATCATGGAAATTTGAACTGTC 2699
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 2503 TGGAGAATGCCTTTTCCTTGAGGCCAAATAGTTCTCAGAATCGTGGAAATTTGAACTGTC 2562
Query 2700 CAAACCCCATTATCTTGGATCTCTTCGATC-GTGAAGCATATCCAGGTTTCAAACCTCAT 2758
|||||||||||||||||||||||||| ||| | ||||||||||| |||||||| ||||||
Sbjct 2563 CAAACCCCATTATCTTGGATCTCTTCAATCAG-GAAGCATATCCTGGTTTCAATCCTCAT 2621
Query 2759 CCTTATATCCACAAAGAATTGTCAGAACTGGGCAAGGGACAGACCCTGAAAAGCAGCACG 2818
| ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct 2622 CGTTATATCCACAAAGAATTGTCAGAACTTGGCAAGGAACAAACCCTGAAAAGCAGCACG 2681
Query 2819 GATTCTGATGTGGCTAGGATGACAACCAAATTTGATGGCTCTGAAGAAGGAAACAAACAT 2878
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2682 GATTCTGATGTGGCTAGGATGACAACCAATTTTGATGGCTCTGAAGAAGGAAACAAACAT 2741
Query 2879 CTGCAGGGTGCAGAGACATTTCGTCAGTTATCTAAAGCTAGGAAATTGGGCATACTGGAT 2938
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2742 CTGCAGGGTGCAGAGACATTTCTTCAGTTATCTAAAGCTAGGAAATTGGGCATACTGGAT 2801
Query 2939 CTGTCTCCTGAAGATGAAGTGGAAGGAGAACTTCTATATTATCAGCTTCAGTTACTTGGC 2998
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2802 CTGTCTCCTGAAGATGAATTGGAAGGAGAACTTCTATATTATCAGCTTCAGTTACTTGGC 2861
Query 2999 ACTGCAGTTTCAAGAAAGCAACTATCTGACAATTTAGTCTATGAAGTTGCTAAAAAGCTA 3058
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2862 ACTGCAGTTTCAAGAAAGCAACTATCTGACAATTTAGTCTATGAAGTTGCTAAAAAGCTG 2921
Query 3059 CCTCTGGAAATTGATGAACAACATGGACGAAGATGGGATGATGTTCTGGTCAACAAATAT 3118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2922 CCTCTGGAAATTGATGAACAACATGGACGAAGATGGGATGATGTTCTGGTCAACAAATAT 2981
Query 3119 TTCCATGATGTCAGGGAAGCAAGAAAGCAAGGTAGGAAAGAGAAAAGACACAAACAAGCC 3178
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 2982 TTCCATGATGTCAGGGAAGCAAGAAAGCAAGGTAGGAAAGAGCAAAGAAACAAACAAGCC 3041
Query 3179 CAGGCTGTTCTAGCTGCTGCTACTGCTGCAGCGGCGACATCTTCTAGGAATACATCGCTT 3238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3042 CAGGCTGTTCTAGCTGCTGCTACTGCTGCAGCGGCGACATCTTCTAGGAATACATCGCTT 3101
Query 3239 AGGAAAGATATGTCAGAAGAACCTGCACAACAAGAGATGAGCACTTCTAGACGTAAAGTT 3298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3102 AGGAAAGATATGTCAGAAGAACCTGCACAACAAGAGATGAGCACTTCTAGACGTAAAGTT 3161
Query 3299 GCTGGCAGCTCTCACCTAGTGCCACAGACAAAGGAAACACTTTTAAAGATGACTGTTTCT 3358
| |||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct 3162 GTTGGCAGCTCTCACCTAGTTCCACAGACAAAGGAATCACTTTTAAAGATGGCTGTTTCT 3221
Query 3359 GGACCACCTTCCGAGAAGCGGTCTGATCATCGCACACCAGACTTTTCAGTAGAAAATCCA 3418
|| ||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 3222 GGGCCACCATCCGAGAAGCGGTCTGATCATCACACACCAGACTTTTTAGTAGAAAATCCA 3281
Query 3419 CGAACTTGTGACATCTGCAGGCGCTCCGAAACTATATGGAACCTGATTGTAGTGTGCTCT 3478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3282 CGAACTTGTGACATCTGCAGGCGCTCCGAAACTATATGGAACCTGATTGTAGTGTGCTCT 3341
Query 3479 AGTTGCAAGGTTGCTGTTCACATGGATTGCTACAAATGTGCTAAAGAATCTACTGGTCCC 3538
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3342 AGTTGCAAGGTTGCTGTTCACATTGATTGCTACAAATGTGCTAAAGAATCTACTGGTCCC 3401
Query 3539 TGGTACTGTGAGCTATGTGCGGAGTCATCTTCAGAACCTTCTTTCAATTTTGGGGAAAAA 3598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3402 TGGTACTGTGAGCTATGTGCGGAGTCATCTTCAGAACCTTCTTTCAATTTTGGGGAAAAA 3461
Query 3599 CCGAATTCTTCTACAGAATGTACTCTGTGTGGTGGCACAACTGGGGCTTTTAGGAAAACT 3658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3462 CCGAATTCTTCTACAGAATGTACTCTGTGTGGTGGCACAACTGGGGCTTTTAGGAAAACC 3521
Query 3659 ACAAATGGGCAATGGGTACATGCTTTTTGTGCTGAGTGGTCCTTGGAGTCAACGTTCAGA 3718
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3522 ACAAATGGGCAATGGGTACATGCGTTTTGTGCTGAGTGGTCCTTGGAGTCAACGTTCAGA 3581
Query 3719 AGGGGACAAATAAACCCTGTGCAGGGAATGGAGTCTGTGGCCAAGAACACGGACACTTGT 3778
|||||||||||||| ||||||||||||||||||||| |||||||||| ||||| | ||||
Sbjct 3582 AGGGGACAAATAAATCCTGTGCAGGGAATGGAGTCTCTGGCCAAGAAAACGGATAATTGT 3641
Query 3779 TGTGTATGCCAACGGATATCTGGTGCATGCATTAAGTGTAGTTATGGTAACTGCCAGACG 3838
||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||
Sbjct 3642 TGTGTATGCCAACGGATATATGGTGCATGCACTAAGTGCAGTTATGGTAACTGCCAGACG 3701
Query 3839 ACATTCCACCCCTCCTGTGCCAGAAGCGCGGGTTTTCATATGACTGGAGGTGGTAAACAT 3898
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3702 ACATTCCACCCCTCCTGTGCCAGAAGCGCGGGTTTTCATATGACTGGTGGTGGTAAACAT 3761
Query 3899 CCGCATAAGGCGTACTGTGAGAAGCATAGCATAGAGCAGAAGGCAAAGGCCGAATCTCAG 3958
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 3762 CCGCATAAGGCGTACTGTGAGAAGCACAGCATGGAGCAGAAGGCAAAGGCCGAATCTCAG 3821
Query 3959 AAACATGGGGCAGAGGAGCTGAAAAGTCTCAAACATTATAGGGTAGGAGTTCTTAGCGAA 4018
|||||||| ||||||||||||||||||||||||||||||||||| | | ||
Sbjct 3822 AAACATGGTGCAGAGGAGCTGAAAAGTCTCAAACATTATAGGGT-----T-----G--AA 3869
Query 4019 GTTGAACTTGAGAGGTTACGCCTTCTGTGCGAGCGGATAGTCAAGAGGGAGAAATTAAAG 4078
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3870 ------CTTGAGAGGTTACGCCTTCTGTGCGAGCGGATAGTCAAGAGGGAGAAATTAAAG 3923
Query 4079 CGAGAGTTGGCTATTTCCTCACATGAAATACTTGCTGCCAAAAGGGATCACGCTGCACGT 4138
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3924 CGAGAGTTGGCTATTTCCTCACATGAAATACTTGCTGCCAAAAGGGATCATGCTGCACGG 3983
Query 4139 TCATTACATGCCCGTAATCCATTTTCTCCTCCAGAAGTATCGTCGGACTCAGCTACAACA 4198
||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3984 CCATTACATGTCCGTAATCCATTTTCTCCTCCAGAAGTTTCGTCGGACTCAGCTACAACA 4043
Query 4199 TCAATAAAAGGTCATCCTGATAGTAATATATCTGGCAGTGAAGCAATACAGAGGTCAGAT 4258
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4044 TCAATAAAAGGCCATCCTGATAGTAATATATCTGGCAGTGAAGCAATACAGAGGTCAGAT 4103
Query 4259 GATATCACCATCGACAGCACAGTCACTGATAAGCGCCGAGGCAAAGGTCCCATATTAATG 4318
|||||||| || |||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 4104 GATATCACTATTGACAGCACAGTCACTGATAAGCGCAGAGGCAAAGGTCCCTTATTAATG 4163
Query 4319 GATACGGATCAGAAAACCGATGACAGTGCTACTTCCAAGAGTCGGTTTTCCCGTAAGCCA 4378
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct 4164 GACACGGATCAGAAAACTGATGACAGTGCTACTTCCAAGAGTCGGTTTTCCCGTAAACTA 4223
Query 4379 ACAGAAAGACAGATCTTATCTGGGAAAACTGTTCCCCGCAAACATTGTATAGTGTCACCT 4438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4224 ACAGAAAGACAGATCTTATCTGGGAAAACTGTTCCCCGCAAACATTGTATAGTGTCACCT 4283
Query 4439 AGTGTTTCAGAGGATGGAGATAACGGGTCAAAGCCCAAGAAGCAGCATGTAGAAACATTT 4498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4284 AGTGTTTCAGAGGATGGAGATAACGGGTCAAAGCCCAAGAAGCAGCATGTAGAAACATTT 4343
Query 4499 GCAAAAGAGCTGGTGATGACATCAGATGAAGCTTCTTTCAAGAACCGGCGGCTTCCAAAG 4558
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 4344 GCAAAAGAGCTGGTGATGACATCAGATGAAGCTTCTTTCAAGAACCGGCGGCTCCCAAAG 4403
Query 4559 GGATACTTCTATGTTCCTGTTGATTGTCTTCAGGAAGACAAACCGGGAAACCAGAAGCTG 4618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4404 GGATACTTCTATGTTCCTGTTGATTGTCTTCAGGAAGACAAACCGGGAAACCAGAAGCTG 4463
Query 4619 GCTTCATCTGACAAGCCAGCGGACCAGAAGACATCTTCAGGTGATCAGTCAGGTAAAGAC 4678
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 4464 GCTTCATCTGACAAGCCAGCGAACCAGAAGACATCTTCAGGTGATCAGTCAGGTAAAGAC 4523
Query 4679 GACGGGTAAAAGCTGAGAACACACATTTTGGGCTCATTGCTCCTACCTTAATTAGATACT 4738
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 4524 GACGGGTAAAAGCTGAGAACACACATTTTGG-CTCATTGCTCCTACCTTAATTAGATACT 4582
Query 4739 GGCCATTGGTGGACATTGCCTTCTGCGCCCTAACCAGGATTCACCAACTGGCTTAAAGCA 4798
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 4583 GGCTATTGGTGGACATTGTCTTCTGCGCCCTAACCAGGATTCACCAACTGGCTTAAAGCA 4642
Query 4799 AAAAGAACAGATGGTATTGC--TACAAAAGAGCTGTGGCTGCAACTGAGAATCAGCTAAA 4856
||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 4643 AAA-GAACAGATGGTATTGCGCTACAAAAGAGCTGTGGCTGCAACTGAGAATCAGCTAAA 4701
Query 4857 AAA-GCTAGTGTGAAGCTTTTGGGTACTCAATACAAACTGTGCCTATTGGTAATGTTTGA 4915
||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 4702 AAAAGCTATTGTGAAGCTTTTGGGTACTCGATACAAACTGTGCCTATTGGTAATGTTTGA 4761
Query 4916 GATTTGAGGGTAACATGTCATCTCTATAGaaaaaaaGGCTTCAGATTGGATTCAGGGAAG 4975
|||||||||||||||| | ||| |||| ||||| ||||||||||||||||||||||||
Sbjct 4762 GATTTGAGGGTAACAT--C-TCT--ATAGGAAAAA-GGCTTCAGATTGGATTCAGGGAAG 4815
Query 4976 TGAGaaaaaaaGCTCCCTCTTACCATATAAAGAAGGACCGGTCACGTGTAATTCTGTTTG 5035
|||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 4816 TGAGAAAAAA-GCTCCCTATTACCATATAAAGAAGGATCGGTCACGTGTAATTCTGTTTG 4874
Query 5036 TATAAAGAAGCGGGaaaaaaa-a---GGGTTGCATAAGTGTAAATATTCATCAATTGTGT 5091
||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||
Sbjct 4875 TATAAAGAAGCGGAAAAAAAAGAAAAGGGTTGCATAAGTGTATATATTCATCAATTGTGT 4934
Query 5092 CTAAAATCTGACCAAGGG 5109
||||||||||||||||||
Sbjct 4935 CTAAAATCTGACCAAGGG 4952
Score = 2558 bits (1385), Expect = 0.0
Identities = 1582/1673 (95%), Gaps = 29/1673 (2%)
Strand=Plus/Plus
Query 1 AAATAACGCGAAAATCTCTCTCTGAGaaaaaaaaataaaataaaagaaaaaaaaGAACCG 60
|||||||||||||| |||||||||| |||||| | ||||| ||| | |||| | |||||
Sbjct 1 AAATAACGCGAAAA--TCTCTCTGAG-AAAAAATA-AAAAT-AAA-ATAAAAGA-AACCG 53
Query 61 AACCAGTCGTGGGAAGGATCCGAAAGAACATGAACCAGAGAAATTTGAAGAAGAAACCCT 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 54 AACCAGTCGTGGGAAGGATCCGAAAGAAGATGAACCAGAGAAATTTGAAGAAGAAACCCT 113
Query 121 AATCTTAGCCTCGCTTTTAttcttcttcatcttcttctttcttctttcttcgttcttAAT 180
|||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||
Sbjct 114 AATCTTAGCCTCGCTTTTATTC-T-ATCTTCTTCTTC-TTCTTCTTTCTTCGTTCTTAAT 170
Query 181 CTGAAAGGCGCCAAGATTGGTACGGG-GGAGCTAGGCTAGGGCTAGG-TTTTAGGCTCGG 238
|||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||
Sbjct 171 CTGAGAGGCGCCAAGATTGGTACGGGCGGAGCTAGGCTAGGGTTAGGATTTTAGGCTCGG 230
Query 239 GAAATTAGGGTTAGGGTTTTGA-TTAATTGTCTGTTTCTTTCTCCCGTTCTTTGGGAGGT 297
|||||||||||||||||||||| || |||| |||||||||||||| || ||||||||||
Sbjct 231 GAAATTAGGGTTAGGGTTTTGATTTTATTGGCTGTTTCTTTCTCCTGTGGTTTGGGAGGT 290
Query 298 GAAATTG-AAGGCGGGGTCGTATCGGAGGATTTGGGA-TTTAGGGTTAGGGTTAAGTGTT 355
||||||| ||||||| || |||| ||||||||||||| ||||||||||||||||||||||
Sbjct 291 GAAATTGAAAGGCGGAGTTGTATTGGAGGATTTGGGATTTTAGGGTTAGGGTTAAGTGTT 350
Query 356 TTTTCG---TTTCATGGGCGGTGTGGGAGTTTATGGTGGTGGTTTGTGTCGGTTATGAAC 412
|| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 351 TTCTCGTTTTTTCATGGGAGGTGTGGGAGTTTATGGTGGTGGTTTGTGTCGGTTATGAAC 410
Query 413 GTTGACCAATGCCAGTGGCGGAAGAAGATGATGGGTAGGGGAGTGGACGGAGGTTGTGGT 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 411 GTTGACCAATGCCAGTGGCGGAAGAAGATGATGGGTAGGGGAGTGGACGGAGGTTGTGGT 470
Query 473 GCTGAAGAGAAGCCTTATCGCCCATTTCGCAGGGCTGTGTTAGATAAGGAGAATGGGAAC 532
|||||||||||||||||||| |||||||| |||| || ||||||||||||||||
Sbjct 471 GCTGAAGAGAAGCCTTATCGACCATTTCGTAGGGTTGCGTTAGATAAGGAGAAT------ 524
Query 533 AAGGGCTTTGAGGATATGGGTTCGTTGGAAATCGATTTCTTAGCTCAAGCTAGCAAAAAT 592
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 525 --GGG-TATGAGGATATGGGTTCGTTGGAAATCGATTTCTTAGCTCAAGCTAGCAAAAAT 581
Query 593 CTTTCTGAGAGGTCTCCATATGATGTTCCTGAAGATGGTTCTACTTCTGGGTTAAGTGTT 652
|| |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||
Sbjct 582 CTATCTGAGAGGTCTCCTTTTGATGTTCCTGAAGATGGTTCTACTTCTGTGTTAAGTGTG 641
Query 653 CCTACTCTACCCATTGCTTTAGCTAATTTGCTGAAGAACCATACGAATAACAAGAAACGG 712
||||||||||| |||||||||||||||||||||||||||||| || |||| |||||||||
Sbjct 642 CCTACTCTACCTATTGCTTTAGCTAATTTGCTGAAGAACCATTCGGATAATAAGAAACGG 701
Query 713 CATAAGAAGTCTCATTCTGGTGCGGATAAGAAGAAGAAGAAGTCTTCTAGGCAAGGGGAT 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 702 CATAAGAAGTCTCATTCTGGTGCGGATAAGAAGAAGAAGAAGTCTTCTAGGCAAGGGGAT 761
Query 773 AAGTTGAGAAGTGGGAGTATCTGGCTTGAACATGAGGACTACTTTAGGCGCTTAGATTTT 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 762 AAGTTGAGAAGTGGGAGTATCTGGCTTGAACATGAGGACTACTTTAGGCGCTTAGATTTT 821
Query 833 CCTGATTTAGAAACTTTGTCAGATTTAGCATCTCTACGATCTTTATCTTCTAGAAATTGC 892
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 822 CCTGATTTAGAAACTTTGTCTGATTTAGCATCTCTACGATCTTTATCTTCTAGAAATTGC 881
Query 893 TTTTCAATTCCATCGGTGGAGTACGAATCTATTGATATTCAACAGAGGGAAACCGATGCG 952
||||| |||||||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct 882 TTTTCCATTCCATCGGTGGAATACGATTCTATTGATATTCAACAGAGGGAAACTGATGCG 941
Query 953 AGTGCCAAGAATGAGGATGTTGTTTGTGGAGATGGCGTTGTTCTGCAACAAATTAAGAAC 1012
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 942 AGTGCAAAGAATGAGGATGTTGTTTGTGGAGATGGCGTTGTTCTGGAACAAATTAAGAAC 1001
Query 1013 CTTCTCAGTAAAGAGATATCTGAAGGCACAGTAAGAAAAGAAGAGGATGTTGTTCAGCCA 1072
||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1002 CTTCTCACTAAAGATATATCTGAAGGCACAGTAAGAAAAGAAGAGGATGTTGTTAAGCCA 1061
Query 1073 ATGAATGTTGACAATGTGGGGAATGGAATCTCCTCTGGGTCTGACTATTCTGGTAGTTTA 1132
||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1062 ATGGGTGTTGACAATGTAGGGAATGGAATCTCCTCTGGGTCAGACTATTCTGGTAGTTTA 1121
Query 1133 GAATGGGTTTTAGGTAATAGAAATAGGATTTTGTTGACATCAGAAAGGCCCTCCAAAAAG 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1122 GAATGGGTTTTAGGTAATAGAAATAGGATTTTGTTGACATCAGAAAGGCCCTCCAAAAAG 1181
Query 1193 CGGAAGCTTCTTGGTGGTGATGCAGGTTTGGGGAAATTAATGGTTGCGGCTCCTTGTGAA 1252
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 CGGAAGCTTCTTGGTAGTGATGCAGGTTTGGGGAAATTAATGGTTGCGGCTCCTTGTGAA 1241
Query 1253 GGGAATGCATTGTTATGTGATTTTTGCTGCACTGATCATCACCAGTTGATTGTTTGCACT 1312
|||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 1242 GGGAATGCGTTGTTATGTGATTTTTGCTGCACTGGTCATCATCAGTTGATTGTTTGCACT 1301
Query 1313 TCCTGCAAAGCTACAGTTCATAAAAAATGCTATGGCCTGCTTGAAGATTCAGATAAATCT 1372
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||
Sbjct 1302 TCCTGCAAAGCTACAGTTCACAAAAAATGCTATGGCCTGCTTGAAGATTCAGGTAAACCT 1361
Query 1373 TGGTTGTGCTCTTGGTGTGAGCTGGAGAATAGCCGTGGTCATTCTGAAAGACCATGCTTG 1432
|||||||||||||||||||||||||||||| | |||| | ||||||||||||||||||||
Sbjct 1362 TGGTTGTGCTCTTGGTGTGAGCTGGAGAATGGTCGTGCTGATTCTGAAAGACCATGCTTG 1421
Query 1433 CTTTGTCCAAAAAAGGGTGGCATCCTTAAACCTGTTCTCTCAAAA-CTTGAGAATGGTGG 1491
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1422 CTTTGTCCAAAAAAGGGTGGCATCCTTAAACCTGTTCTCTCAAAAACT-GAGAATGGTGG 1480
Query 1492 GCCGGCGGAGTTTGCTCATCTTTTTTGTTCTCTGTGGATGCCTGAGGTGTATATAGAAGA 1551
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCCGGCGGAGTTTGCTCATCTGTTTTGTTCTCTGTGGATGCCTGAGGTGTATATAGAAGA 1540
Query 1552 CTTGaaaaaaaTGGAGCCCATCTTGAATTTGCCTGGAATAAAGGAAACCCGGAGGAAGTT 1611
|||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct 1541 CTTGAAAAAAATGGAGCCCATCTTGAATTTTCCTGGGATAAAAGAAACTCGGAGGAAGTT 1600
Query 1612 ATTGTGTAACTTGTGCAAGGTGAAATCTGGTGCTTGCATTCGCTGTTGTAATG 1664
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1601 ATTGTGTAACTTGTGCAAGGTGAAATCTGGTGCTTGCATTCGCTGTTGTAATG 1653
Score = 863 bits (467), Expect = 0.0
Identities = 493/506 (97%), Gaps = 0/506 (0%)
Strand=Plus/Plus
Query 1751 CATTCAGATATTCAAGAAAGTGGAAAGTCCGTAGAGGGAGGAGAAAGTAATGCAGCTGAA 1810
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1824 CATTCAGATATTCAAGAAAGTGGAAAGTCAGTAGAGGGAGGAGAAAGTAATGCAGCTGAA 1883
Query 1811 AGTCGTTCTCCTATATGTCATCTTCCATCAGAATCTGTTAGAGAAGGTCACCTAAGTAAT 1870
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1884 AGTCGTTCTCCTATATGTCATCTTCCATCAGAATCTGTTGGAGAAGGTCACCTAAGTAAT 1943
Query 1871 GATGAGATGGGAGTTGACGTAGGAACACCGGGTACAGGTTCTGATATTTCGAGAAACAGT 1930
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1944 GATGAGATGGGAGTTGATGTAGGAACACCGGGTACAGGTTCTGATATTTCGAGAAACAGT 2003
Query 1931 GAGTTACAAGAGCTAGAATCACCACACTCAAAATTTAACTGGTCTGCAACAGACAATGTA 1990
|| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 2004 GACTTACAAGAGCTAGAATCACCACATTCAAAATTTAACTTGTCTGCAACAGACAATGTA 2063
Query 1991 GAATCAGGGATGACTGGGAGAAGCAATGAAGATGAAAGAACTCTGTCCAAGTCTCTTAGT 2050
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2064 GAATCAGGGATGACTGGGAGAAGCAACGAAGATGAAAGAACTCTGTCCAAGTCTCTTAGT 2123
Query 2051 TTTGGATTGATTCTGAAAAAGTTGATCGACCTGGGTAAAGTGGATGTGAAGGATGTGGCT 2110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2124 TTTGGATTGATTCTGAAAAAGTTGATCGACCTGGGTAAAGTGGATGTGAAGGATGTGGCT 2183
Query 2111 GCAGAGATTGGGATTAATCCTGATGCTTTGAGTGCCAAACTTAAGGACGGAGACTTGTTA 2170
|||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct 2184 GCAGAGATTGGGATTAATCCTGATGCTTTGAGGGCTAAACTTACGGACGGAGACTTGTTA 2243
Query 2171 CCTGATTTACTAGGCAAAGTAGATAAATGGCTTAGGCAGCATGCACACATGGGTTCTTCG 2230
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 2244 CCTGATTTACTAGGCAAAGTAGTTAAATGGCTTAGCCAGCATGCACACATGGGTTCTTCG 2303
Query 2231 GATAAAGGCAAAAATTTAAAACGTAA 2256
|||||||||||||||||||||| |||
Sbjct 2304 GATAAAGGCAAAAATTTAAAACCTAA 2329
Score = 91.6 bits (49), Expect = 7e-17
Identities = 49/49 (100%), Gaps = 0/49 (0%)
Strand=Plus/Plus
Query 1702 GGAGGCAGGGAATAGGCTAGAGGTCTGGGGAAAACATGGGTGTGATACT 1750
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1748 GGAGGCAGGGAATAGGCTAGAGGTCTGGGGAAAACATGGGTGTGATACT 1796
> AT1G77810.1 | Symbols: | Galactosyltransferase family protein
| chr1:29260562-29263113 REVERSE LENGTH=1631
Length=1631
Score = 86.1 bits (46), Expect = 3e-15
Identities = 48/49 (98%), Gaps = 0/49 (0%)
Strand=Plus/Minus
Query 5061 TTGCATAAGTGTAAATATTCATCAATTGTGTCTAAAATCTGACCAAGGG 5109
||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1631 TTGCATAAGTGTATATATTCATCAATTGTGTCTAAAATCTGACCAAGGG 1583
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 254948404326
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5