BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476959 Length=848 Score E Sequences producing significant alignments: (Bits) Value AT1G77950.1 | Symbols: AGL67 | AGAMOUS-like 67 | chr1:29306957-... 1201 0.0 > AT1G77950.1 | Symbols: AGL67 | AGAMOUS-like 67 | chr1:29306957-29309863 FORWARD LENGTH=1027 Length=1027 Score = 1201 bits (650), Expect = 0.0 Identities = 763/818 (93%), Gaps = 5/818 (1%) Strand=Plus/Plus Query 1 AATAATAGAGTGCGTTTTGATTA-TTTGCAGCGATCATTGGACATGGGTCGGGTGAAATT 59 ||||||||| || |||||||||| ||||||| || ||| ||| ||||||||||| ||||| Sbjct 30 AATAATAGATTGTGTTTTGATTATTTTGCAGTGACCATCGGATATGGGTCGGGTTAAATT 89 Query 60 GGAGTTAAAGCGGATAGAGAAGAACACGAACCGACAAATTACGTTCTCAAAACGTAAAAA 119 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 90 GGAGTTAAAGCGTATAGAGAAGAGCACGAACCGACAAATTACGTTCTCAAAACGTAAAAA 149 Query 120 AGGTTTAATaaaaaaaGCGTATGAATTGTCAACACTTTGTGATATCGATCTTGCCCTCCT 179 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| Sbjct 150 AGGTTTAATAAAAAAGGCTTATGAATTGTCAACACTTTGTGACATCGATCTTGCCCTCCT 209 Query 180 CATGTTCTCTCCTTCCGATCGACTATGTCTCTTTTCCGGTCAAACAAGGATCGAGGACGT 239 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 210 CATGTTCTCTCCCTCTGATCGACTATGTCTCTTTTCCGGTCAAACAAGGATCGAGGACGT 269 Query 240 TTTGGCGAGGTACATCAATCTTCCTGATCAAGAAAGAGAAAACGCCATAGTTTTTCCTGA 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 270 TTTGGCGAGGTACATCAATCTTCCTGATCAAGAAAGAGAAAACGCCATAGTTTTCCCTGA 329 Query 300 TCAGAGCAAACGCCAAGCTATCCAAAACAAAGAGTATTTGTTAAGAACTCTGGAAAAACT 359 ||||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct 330 TCAGAGCAAGCGCCAAGGTATCCAAAACAAAGAGTATTTGTTAAGGACTTTGGAAAAACT 389 Query 360 CAAAATTGAAGATGACATGGCTCTCCAAATCAACGAACCTCGCCCTGAAGCTATCAA-TA 418 ||||||||| |||||||||||||||||||||||||||||||| || ||||| | ||| | Sbjct 390 CAAAATTGAGGATGACATGGCTCTCCAAATCAACGAACCTCGTCCAGAAGCCACCAACT- 448 Query 419 CCGATGTCGAGGAACTTGAGCAAGAAGTTTGTAGATTACAACAGCAGCTTCAGATATCAG 478 || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 449 CCAATGTCGAGGAACTTGAGCAAGAAGTTTGTAGATTACAACAACAGCTTCAGATATCAG 508 Query 479 AGGAAGAACTAAGGAAATTCGAACCAGATCCAATGAGGTTTACATCAATGGAGGAGATTG 538 |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 509 AGGAAGAACTCAGGAAATTCGAACCAGATCCAATGAGGCTAACATCAATGGAGGAGATTG 568 Query 539 AAGCATGTGAAACTCATCTCATCAATACATTGACAAGTGTCGTACAGAGAAGGGAACATT 598 ||||||||||| || | ||||||||||| |||||| ||||||| |||||||||||||||| Sbjct 569 AAGCATGTGAAGCTAACCTCATCAATACGTTGACACGTGTCGTCCAGAGAAGGGAACATT 628 Query 599 TGTTGAGGAAGTCCTGCGAAGCACCAAGTAACCAACAAAGCATGCAGGGGATCCTTCTAA 658 ||||||| |||||||||||||||| ||||||||||||||||||| | ||||||||||||| Sbjct 629 TGTTGAGAAAGTCCTGCGAAGCACAAAGTAACCAACAAAGCATGGACGGGATCCTTCTAA 688 Query 659 ATGACATCGTCGAGGATTGGGGGTCTGAGGCTGAGCCCAAACAAGCCCATGTGATGGCTA 718 |||||||||||||||||||||| ||||| | |||||||||||||||||| |||| |||| Sbjct 689 ATGACATCGTCGAGGATTGGGGACCTGAGCCCGAGCCCAAACAAGCCCATATGATAGCTA 748 Query 719 AGTCGGCCCATCAGTCAAATCAGCTAAGCTATGATTTGCTCTTACA-AGGGAGTAATTCG 777 | ||||||||||| |||||||||| |||||||||||| ||||||| ||| ||||||||| Sbjct 749 ATTCGGCCCATCATTCAAATCAGCCAAGCTATGATTTACTCTTACGCAGG-AGTAATTCG 807 Query 778 AGTTCGAACCAAAATCCAAAATGATATTAGGTGAATCG 815 |||||||||||||||||||||||||||||||||||||| Sbjct 808 AGTTCGAACCAAAATCCAAAATGATATTAGGTGAATCG 845 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41342702981 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5