BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477046
Length=1515
Score E
Sequences producing significant alignments: (Bits) Value
AT1G78830.1 | Symbols: | Curculin-like (mannose-binding) lecti... 2292 0.0
AT1G78820.1 | Symbols: | D-mannose binding lectin protein with... 1631 0.0
> AT1G78830.1 | Symbols: | Curculin-like (mannose-binding) lectin
family protein | chr1:29636955-29638552 REVERSE LENGTH=1598
Length=1598
Score = 2292 bits (1241), Expect = 0.0
Identities = 1407/1486 (95%), Gaps = 15/1486 (1%)
Strand=Plus/Plus
Query 1 TACATAATCATCTCAGTCCTCAAC-C-CCCaaaaaaaCAAAATCATGTCTCGATTTCAC- 57
||||||||||||||| |||| || | | ||| ||||||||||||||||||||||| |
Sbjct 1 TACATAATCATCTCACTCCTTTACTCACACAAGAAAACAAAATCATGTCTCGATTT-GCT 59
Query 58 ATCTTATTAACTTTAGCACTTGCCATTGCCACTGTTTCAGTGGTTATAGCTCAAGTCCCT 117
|||||| |||| || ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 60 ATCTTAGTAACCTTGGCACTTGCCATTGCCACTGTTTCGGTGGTTATAGCTCAAGTCCCT 119
Query 118 CCAGAGAAACAATTCAGAGTCCTCAACGAAGGCGAATTCGGTCAATACATCACCGAGTAC 177
|| |||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||
Sbjct 120 CCGGAGAAACAATTCAGAGTCGTCAACGAAGGAGAATTCGGTGAATACATCACTGAGTAC 179
Query 178 GACGCAAGTTACAGGTTCATCGAATCATCAAACCAGAGCTTCTTCACATCACCATTCCAG 237
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 GACGCAAGTTACAGATTCATCGAATCATCAAACCAGAGCTTCTTCACATCACCATTCCAG 239
Query 238 CTCTTGTTTTACAACACTACCCCTAGCGCCTACGTCTTAGGTCTCCGAGTCGGACTCAGG 297
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 240 CTCTTGTTTTACAACACTACCCCTAGCGCCTACATCTTAGCTCTCCGAGTCGGACTCAGG 299
Query 298 CGTGACGAGTCTACCATGCGTTGGATATGGGACGCAAATCGCAACAATCCCGTCGGAGAA 357
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 300 CGTGACGAGTCTACCATGCGTTGGATATGGGACGCGAATCGCAACAACCCCGTCGGAGAA 359
Query 358 AACGCTACACTCTCACTCGGCCGTAACGGCAACCTCGTCCTCGCTGAAGCTGACGGACGA 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 AACGCTACACTCTCACTCGGCCGTAACGGCAACCTCGTCCTCGCTGAAGCTGACGGACGA 419
Query 418 GTCAAGTGGCAGACTAACACAGCTAACAAAGGCGTCACCGGATTCCAAATCTTACCCAAC 477
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GTCAAATGGCAGACTAACACAGCTAACAAAGGCGTCACCGGATTCCAAATCTTACCCAAC 479
Query 478 GGCAACATGGTCCTACACGACAAAAACGGCAAATTCGTTTGGCAGAGTTTTGATCACCCC 537
|| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 480 GGAAACATCGTCCTACACGACAAAAACGGCAAATTCGTATGGCAGAGTTTCGATCACCCC 539
Query 538 ACCGATACACTCCTCAACGGCCAGTCGTTAAAAGTTAACGGCGTTAACAAACTCGTTAGC 597
|||||||||||||||| |||||| ||||||||||||||||| || |||||||||||||||
Sbjct 540 ACCGATACACTCCTCACCGGCCAATCGTTAAAAGTTAACGGAGTCAACAAACTCGTTAGC 599
Query 598 CGTACATCCGATTTAAACGGCTCAGATGGTCCGTACAGCATAGTGTTGGACAACAAAGGT 657
|||||||| |||| |||||||||||||||||||||||||| ||| ||||||| ||||||
Sbjct 600 CGTACATCTGATTCGAACGGCTCAGATGGTCCGTACAGCATGGTGCTGGACAAAAAAGGT 659
Query 658 TTAACCATGTACGTTAACAAAACCGGTACGCCGTTAGTTTACGGCGGATGGCCGGATCAC 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 TTAACCATGTACGTTAACAAAACCGGTACGCCGTTAGTTTACGGCGGATGGCCGGATCAC 719
Query 718 GATTTCCGCGGCACCGTAACGTTCGCCGTTACAAGAGAGTTCGATAATTTAACGGAGCCG 777
||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct 720 GATTTCCGCGGCACCGTCACTTTCGCCGTTACAAGAGAATTCGATAATTTAACGGAGCCG 779
Query 778 TCAGCTTACGAGCTTCTCCTAGAACCCGCACCACAACCCGCTACAAATCCGGGTAATAAC 837
|||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct 780 TCAGCTTACGAGCTTCTCTTAGAACCCGCACCACAACCCGCTACGAACCCGGGTAATAAC 839
Query 838 CGCCGGTTACTCCAAGTTAGACCAATCGGAAGCGGAGGAGGAACTTTAAATCTGAACAAA 897
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 CGCCGGTTACTCCAAGTCAGACCAATCGGAAGCGGAGGAGGAACTTTAAATCTGAACAAA 899
Query 898 ATCAATTACAACGGAACGATTTCGTATCTCAGACTCGGATCTGACGGGAGTCTTAAGGCT 957
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 900 ATCAATTACAACGGAACGATTTCGTATCTAAGACTCGGATCTGACGGGAGTCTCAAGGCT 959
Query 958 TACTCGTATTTCCCACCAGCTACGTATCTCAAATGGGAAGAGAGTTTCTCATTCTTCTCC 1017
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 TACTCGTATTTCCCAGCAGCTACGTATCTCAAATGGGAAGAGAGTTTCTCATTCTTCTCC 1019
Query 1018 ACTTACTTCGTCCGTCAATGTGGCTTACCGTCGTTTTGCGGCGATTACGGTTACTGCGAT 1077
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1020 ACTTACTTCGTCCGTCAATGTGGCTTGCCGTCGTTTTGCGGCGATTACGGTTACTGCGAT 1079
Query 1078 CGAGGGATGTGCATCGCGTGTCCTACACCAAAAGGATTACTCGGATGGAGTGATAAATGC 1137
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 CGTGGGATGTGCAACGCGTGTCCTACACCAAAAGGATTACTCGGATGGAGTGATAAATGC 1139
Query 1138 GCACCACCTAAAACGACGCAGTTTTGCAGCGGAA--AAG-------CTGTCAACTATTAT 1188
||||||||||||||||||||||||||||||||| ||| ||||||| ||||||
Sbjct 1140 GCACCACCTAAAACGACGCAGTTTTGCAGCGGAGTCAAGGGTAAAACTGTCAATTATTAT 1199
Query 1189 AAGATAGTCGGTGTTGAGCATTTTACTGGGCCTTATGTTAATGATGGACAAGGCCCAACT 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 AAGATAGTCGGTGTTGAGCATTTTACTGGGCCTTATGTTAATGATGGACAAGGCCCAACT 1259
Query 1249 TCTGTGAACGATTGCAAGGCCAAGTGCGATCGTGATTGCAAGTGTTTGGGTTACTTCTAC 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 TCTGTGAACGATTGCAAGGCCAAGTGCGATCGTGATTGCAAGTGTTTGGGTTACTTCTAC 1319
Query 1309 AAGGAGAAAGACAAGAAGTGTTTGCTTGCTCCTCTTCTCGGTACACTTATCAAAGATGCC 1368
|| |||||||||||||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct 1320 AAAGAGAAAGACAAGAAATGTTTGCTTGCTCCTCTGCTTGGTACACTTATCAAAGATGCC 1379
Query 1369 AACACTTCTTCTGTTGCTTATATCAAATATTAGTGTTTTATCGC-AAGGTTTATATACCG 1427
|||||||||||||||||||| |||||||||||||||||| | | || ||| || |||||
Sbjct 1380 AACACTTCTTCTGTTGCTTACATCAAATATTAGTGTTTTTTTGGGAAAGTT-ATTTACCG 1438
Query 1428 AATTCTACTTGAATTCTTAGAGAATTAATGAATAATTGGTGTGCTT 1473
|||||| ||||||||||||||| |||||||||||| |||||||||
Sbjct 1439 AATTCTTTTTGAATTCTTAGAGATTTAATGAATAATCGGTGTGCTT 1484
> AT1G78820.1 | Symbols: | D-mannose binding lectin protein with
Apple-like carbohydrate-binding domain | chr1:29634124-29635813
REVERSE LENGTH=1690
Length=1690
Score = 1631 bits (883), Expect = 0.0
Identities = 1245/1416 (88%), Gaps = 39/1416 (3%)
Strand=Plus/Plus
Query 73 GCACTTGCCATTGCCACTGTTTCAGTGGTTATAGCTCAAGTCCCTCCAGAGAAACAATTC 132
|||||||||||| | |||||||| || || || || ||||||||||| ||||||||||||
Sbjct 76 GCACTTGCCATTTCAACTGTTTCGGTTGTCATGGCCCAAGTCCCTCCCGAGAAACAATTC 135
Query 133 AGAGTCCTCAACGAAGGCGAATTCGGTCAATACATCACCGAGTACGACGCAAGTTACAGG 192
||||| ||||||||| || | || | ||||||||||||||||||||| |||||| |
Sbjct 136 AGAGTGCTCAACGAACCCGGCTACGCCCCATACATCACCGAGTACGACGCGAGTTACCGA 195
Query 193 TTCATCGAA-TCATCAAACCAGAGCTTCTTCAC-ATCACCATTCCAGCTCTTGTTTTACA 250
||| || || ||| | || |||| |||||||| || || ||||||||| |||||||||
Sbjct 196 TTCCTC-AACTCACCGAATCAGAATTTCTTCACAAT-TCCTTTCCAGCTCATGTTTTACA 253
Query 251 ACACTACCCCTAGCGCCTACGTCTTAGGTCTCCGAGTCGG-ACTCAGGCGTGAC--GAGT 307
| || || |||||||||||||| |||| |||||||||||| || ||||||||| ||||
Sbjct 254 ATACAACTCCTAGCGCCTACGTGTTAGCTCTCCGAGTCGGAAC-GAGGCGTGACATGAGT 312
Query 308 CTACCATGCGTTGGATATGGGACGCAAATCGCAACAATCCCGTCGGAGAAAACGCTACAC 367
| || ||||||||| |||||||| ||||||||||| ||||||||||| ||| | ||||
Sbjct 313 -T-TCACGCGTTGGATCTGGGACGCCAATCGCAACAACCCCGTCGGAGACAACTCCACAC 370
Query 368 TCTCACTCGGCCGTAACGGCAACCTCGTCCTCGCTGAAGCT-GACGGACGAGTCAAGTGG 426
||||| ||||||| ||||| ||||| || ||||||| || | |||| | ||||||||||
Sbjct 371 TCTCATTCGGCCGAAACGGAAACCTTGTGCTCGCTG-AGTTAAACGGCCAAGTCAAGTGG 429
Query 427 CAGACTAACACAGCTAACAAAGGCGTCACCGGATTCCAAATCTTACCCAACGGCAACATG 486
|||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct 430 CAGACTAACACAGCCAACAAAGGCGTCACCGGATTCCAAATCTTGCCCAATGGAAACATG 489
Query 487 GTCCTACACGACAAAAACGGCAAATTCGTTTGGCAGAGTTTTGATCACCCCACCGATACA 546
|| |||||||||||| | || |||||||||||||||||||| ||||| ||||||||||||
Sbjct 490 GTGCTACACGACAAACATGGAAAATTCGTTTGGCAGAGTTTCGATCATCCCACCGATACA 549
Query 547 CTCCTCAACGGCCAGTCGTTAAAAGTTAACGGCGTTAACAAACTCGTTAGCCGTACATCC 606
|||||| |||||| || ||||||||||||| ||||||||||||||||||||||||||
Sbjct 550 CTCCTCGTCGGCCAATCCCTAAAAGTTAACGGAGTTAACAAACTCGTTAGCCGTACATCT 609
Query 607 GATTTAAACGGCTCAGATGGTCCGTACAGCATAGTGTTGGACAACAAAGGTTTAACCATG 666
||| | |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 610 GATATGAACGGCTCCGATGGTCCGTACAGCATGGTGTTGGACAACAAAGGCTTAACCATG 669
Query 667 TACGTTAACAAAACCGGTACGCCGTTAGTTTACGGCGGATGGCCGGATCACGATTTCCGC 726
||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct 670 TACGTTAACAAAACCGGTACGCCGTTAGTTTACGGGGGATGGACGGATCACGACTTCCGC 729
Query 727 GGCACCGTAACGTTCGCCGTTACAAGAGAGTTCGATAATTTAACGGAGCCGTCAGCTTAC 786
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 GGTACCGTCACGTTCGCCGTTACAAGAGAGTTCGATAATTTAACGGAGCCGTCAGCTTAC 789
Query 787 GAGCTTCTCCTAGAACCCGCACCACAACCCGCTACAAATCCGGGTAATAACCGCCGGTTA 846
||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 790 GAGCTTCTCTTAGAACCCGCACCACAACCCGCTACGAACCCGGGTAATAACCGCCGGTTA 849
Query 847 CTCCAAGTTAGACCAATCGGAAGCGGAGGAGGAACTTTAAATCTGAA-CAAAATCAATTA 905
||||||||||||||||||||||||||||||||||||||||| || || ||||||||| ||
Sbjct 850 CTCCAAGTTAGACCAATCGGAAGCGGAGGAGGAACTTTAAA-CTTAAACAAAATCAACTA 908
Query 906 CAACGGAACGATTTCGTATCTCAGACTCGGATCTGACGGGAGTCTTAAGGC-TTACTCGT 964
||| |||||||| |||||||| ||||| ||||| ||||| || || ||||| || |||||
Sbjct 909 CAATGGAACGATATCGTATCTGAGACTTGGATCCGACGGTAGCCTCAAGGCCTT-CTCGT 967
Query 965 ATTTCCCA-CCAGCTACGTATCTCAAATGGGAAGAGAGTTTCTCATTCTTCTCCACTTAC 1023
||||||| || || ||||||||| |||||||||||| |||| | |||||||||| ||||
Sbjct 968 ATTTCCCTGCC-GCGACGTATCTCGAATGGGAAGAGACTTTCGCTTTCTTCTCCAATTAC 1026
Query 1024 TTCGTCCGTCAATGTGGCTTACCGTCGTTTTGCGGCGATTACGGTTACTGCGATCGAGGG 1083
|||||||||||||| || || ||| ||||||||||||||||||||||||||||||||||
Sbjct 1027 TTCGTCCGTCAATGCGGTTTGCCGACGTTTTGCGGCGATTACGGTTACTGCGATCGAGGA 1086
Query 1084 ATGTGCATCGCGTGTCCTACACCAAAAGGAT-TACTCGGATGGAGTGATAAATGCGCACC 1142
|||||| ||| ||| |||||||| ||||| | | | | ||||||||||||||||| ||
Sbjct 1087 ATGTGCGTCGGGTGCCCTACACCGAAAGG-TCTGTTAGCTTGGAGTGATAAATGCGCTCC 1145
Query 1143 ACCTAAAACGACGCAGTTTTGCAGCGGA---AA----A--GCTGTCAACTATTATAAGAT 1193
|||||||||||||||||||||||||||| || | |||||||| ||||| |||||
Sbjct 1146 ACCTAAAACGACGCAGTTTTGCAGCGGAGGCAAGGGTAAAGCTGTCAATTATTACAAGAT 1205
Query 1194 AGTCGGTGTTGAGCATTTTACTGGGCCTTATGTTAATGATGGACAAGGCCCAACTTCTGT 1253
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1206 AGTCGGTGTTGAGCATTTTACTGGGCCGTATGTTAATGATGGACAAGGCCCAACTTCTGT 1265
Query 1254 GAACGATTGCAAGGCCAAGTGCGATCGTGATTGCAAGTGTTTGGGTTACTTCTACAAGGA 1313
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266 GAACGATTGCAAGGCTAAGTGCGATCGTGATTGCAAGTGTTTGGGTTACTTCTACAAGGA 1325
Query 1314 GAAAGACAAGAAGTGTTTGCTTGCTCCTCTTCTCGGTACACTTATCAAAGATGCCAACAC 1373
||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1326 GAAGGACAAGAAATGTTTGCTTGCTCCTCTTCTTGGTACACTTATCAAAGATGCCAACAC 1385
Query 1374 TTCTTCTGTTGCTTATATCAAATATTAGTGTTTTATCGCAAGGTTTATATACCGAATTCT 1433
|||||| |||||||| |||||||||||| | | | | |||||| |||||| |
Sbjct 1386 TTCTTCCGTTGCTTACATCAAATATTAGCG----A--G-A---TTTATAAACCGAAACCA 1435
Query 1434 ACTTGAATTCTTAGAGAATTAATGAATAATTGGTGT 1469
|| |||||||| | ||| ||||||||||||||||||
Sbjct 1436 ACGTGAATTCTCATAGATTTAATGAATAATTGGTGT 1471
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74748611505
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5