BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477051
Length=2243
Score E
Sequences producing significant alignments: (Bits) Value
AT1G78882.1 | Symbols: CPuORF56 | conserved peptide upstream op... 3563 0.0
AT1G78880.1 | Symbols: | Ubiquitin-specific protease family C1... 3563 0.0
AT1G16858.1 | Symbols: CPuORF55 | conserved peptide upstream op... 1528 0.0
AT1G16860.1 | Symbols: | Ubiquitin-specific protease family C1... 1528 0.0
> AT1G78882.1 | Symbols: CPuORF56 | conserved peptide upstream
open reading frame 56 | chr1:29652633-29655949 REVERSE LENGTH=2246
Length=2246
Score = 3563 bits (1929), Expect = 0.0
Identities = 2156/2261 (95%), Gaps = 33/2261 (1%)
Strand=Plus/Plus
Query 1 GTGTTCTTCACTTTTTCTTTCCTCAGTTGGTTTGTCC-aa-aaaaaaaaTCTCCACCGCT 58
|||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct 1 GTGTTCTTCACTTTTTCTTTCCTCAGTTGG-TTGTCCAAACAAAAAAAATCTCCACCGCT 59
Query 59 CTGAGAGaaaaaaaG-TGG--GA--agag-gagagagagagaCAACGCACCAACTGTTAC 112
||||||| ||||||| ||| || |||| ||||||||| |||||||||||||||||| |
Sbjct 60 CTGAGAG-AAAAAAGTTGGAAGAGGAGAGAGAGAGAGAGCGACAACGCACCAACTGTTGC 118
Query 113 GGCTCAAAGAGATCTCGATCGGGATCCACACGACGgagatagagatagagagtgagagag 172
|||||||||||||||||||||||||||||| |||||||||||| | |||||| | |||||
Sbjct 119 GGCTCAAAGAGATCTCGATCGGGATCCACAAGACGGAGATAGATAGAGAGAGAGTGAGAG 178
Query 173 CTAACGGATATGGGATCTCAGCTACTTGAGTGTTGCTTCCGTTTCGTCTTCTACTGTCAC 232
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 CTAACGGAAATGGGATCTCAGCTACTTGAGTGTTGCTTCCGTTTCGTCTTCTACTGTCAC 238
Query 233 TCCCACAGCTCCAACTGTTTTCCTTGATACTCTTTTTCTTTTCTCTCTGTCCATTT-CTC 291
|||||||||||||||||||||||||||| | |||||||||| |||| | | ||| |||
Sbjct 239 TCCCACAGCTCCAACTGTTTTCCTTGAT--TGTTTTTCTTTTATCTC-GGCGTTTTACTC 295
Query 292 ATGGATTCTT--GTTTTACTCTCTCAGGGATTTGAAATCCTCACTTTTCAGCACATTCTT 349
||| ||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 296 --GGAAGCTTACAACACACTCTCTCAGGGATTTGAAATCCTCACGTTTCAGCACATTCTT 353
Query 350 TGTGGTGCCCATCTATTCTCTAGCCAGTTTC-GAGTTTCCTGAAGAAATCAAATGGGTTC 408
|||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct 354 TGTGGTTCCCATCTATTCTCTAGCCAG-TTCGGAGTTGCCTGAAGAAATCAAATGGGTTC 412
Query 409 AAGATACGCATCCCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGCCCAGAGCAACC 468
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 413 GAGATACGCATCTCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGGCCAGAGCAACC 472
Query 469 CAAAGAAAAGCCTCCAACAATGAGCTCGGTAGCCATGCCATACACCGGTGGTGATATTAA 528
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 473 CAAAGAAAAGCCTCCAACAATGAGCTCAGTAGCCATGCCATACACCGGTGGTGATATCAA 532
Query 529 GAAATCAGGAGAATTAGGGAAGATGTTTGACATTCCGACTGATGGGACTAAGTCAAGGAA 588
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 533 GAAATCAGGAGAATTGGGGAAGATGTTTGACATTCCGACTGATGGGACTAAGTCAAGGAA 592
Query 589 GTCTGGCCCCATAACTGGAGGATCTTCAAGAAGTGGTACGCAATCAGGTCCAGTGCCTAA 648
||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 593 GTCTGGCCCCATAACCGGAGGATCGTCAAGAAGTGGTGCGCAATCAGGTCCAGTGCCTAA 652
Query 649 TGCAACTGGTCGTATGTCTGGTTCTTTAGCTTCTGCTGGCTCAAATTCAATGAAGAAAAC 708
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 653 TGCAACTGGTCGTATGTCTGGCAATTTAGCTTCTGCTGGTTCAAATTCAATGAAGAAAAC 712
Query 709 AAATTCTGGGCCTTTGTCTAAGCACGGGGAGCCTTTAAAGAAATCCTCTGGTCCGCAATC 768
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 713 AAATTCTGGGCCTTTGTCTAAGCATGGGGAGCCTTTAAAGAAATCCTCTGGTCCGCAATC 772
Query 769 CGGTGGTGTAACAAGGCAAAATTCCGGCCCTATTCCTATACTCCCAACTACAGGTCTCAT 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 CGGTGGTGTAACAAGGCAAAATTCCGGCCCTATTCCTATACTCCCAACTACAGGTCTCAT 832
Query 829 AACATCTGGGCCAATTACCTCGGGCCCTCTAAATTCATCTGGGGCTCCTAGGAAAATTTC 888
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 833 AACATCTGGGCCAATTACCTCGGGGCCTCTAAATTCATCTGGGGCTCCTAGGAAAATTTC 892
Query 889 TGGTCCTCTAGACTATTCTGGTTCGATGAAGACACATATGCCTTCAGTTGTCCACAACCA 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 893 TGGTCCTCTAGACTATTCTGGTTCGATGAAGACACATATGCCTTCAGTTGTCCACAACCA 952
Query 949 GGCGGTAACTACCCTTGCTCCGGAAGATGACTTTTCCTGCATGAAGAGCTTCCCCAAGCC 1008
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 953 GGCGGTAACTACCCTTGCTCCGGAAGATGACTTTTCCTGCATGAAAAGCTTCCCCAAGCC 1012
Query 1009 TGTGCTGTGGCTGGTTATACTTATATTTGTAATGGGGTTCCTCGCTGGAGGGTTCATTCT 1068
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1013 TGTGCTGTGGCTGGTTATACTTATATTTGTGATGGGGTTCCTCGCTGGAGGCTTCATTCT 1072
Query 1069 TGGAGCAGTTCACAATGCAATTCTCCTCATTGTTGTTGCGATCTTGTTCACAGTTGTTGC 1128
|||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct 1073 TGGAGCAGTTCACAATGCAATTCTCCTCATAGTTGTGGCGGTCTTGTTCACAGTTGTTGC 1132
Query 1129 TGCACTTTTCATTTGGAATATTTCTTGTGAAAGGCGTGGTATCACAGATTTCATTGCTCG 1188
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1133 TGCACTTTTCATTTGGAATATTTCTTGTGAAAGACGTGGTATCACAGATTTCATCGCTCG 1192
Query 1189 TTATCCTGATGCTGATCTTAGAACTGCCAAAAACGGTCAATATGTGAAGGTCACTGGGGT 1248
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 TTATCCGGATGCTGATCTTAGAACTGCCAAAAACGGTCAATATGTGAAGGTCACTGGGGT 1252
Query 1249 GGTCACTTGTGGTAACGTGCCTCTGGAATCATCCTTCCATAGAGTTCCCAGATGTGTTTA 1308
|||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct 1253 GGTCACCTGTGGTAACGTGCCTCTTGAATCATCCTTCCATAGAGTTCCTAGGTGTGTTTA 1312
Query 1309 CACGTCTACTTGTCTATATGAGTACCGTGGATGGGGTTCAAAGCCAGCCAATGCTTCACA 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1313 CACGTCTACTTGTCTATATGAGTACCGTGGATGGGGTTCAAAGCCAGCCAATGCTTCACA 1372
Query 1369 TCGTCGCTTCACATGGGGACTGAGATCAGCAGAGAGGCATGTGGTAGACTTCTACATTTC 1428
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 TCGTCGCTTTACATGGGGACTGAGATCAGCAGAGAGGCATGTGGTAGACTTCTACATTTC 1432
Query 1429 TGATTTCCAATCTGGGCTCAGAGCATTGGTCAAAACTGGAAACGGTGCAAAGGTAACACC 1488
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1433 TGATTTCCAATCTGGGCTCAGGGCATTGGTCAAAACTGGAAACGGTGCAAAGGTAACACC 1492
Query 1489 TCTCGTCGATGATTCTGTTGTCATCGATTTTAGGCCAGGGAGTGAGCAAGCCTCTCCAGA 1548
|| |||||||||||||||||||||||||||| |||||| | ||||||||||||||||||
Sbjct 1493 GCTTGTCGATGATTCTGTTGTCATCGATTTTAAGCCAGGAAATGAGCAAGCCTCTCCAGA 1552
Query 1549 CTTTGTAAGGTGGTTGGGTAAAAAGAATCTAACCAATGATGATCGAATAATGCGGCTTAA 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1553 CTTTGTAAGGTGGTTGGGTAAAAAGAATCTAACCAATGATGATCGAATAATGCGGCTTAA 1612
Query 1609 AGAAGGGTATATCAAAGAAGGAAGTACAGTGAGTGTGATTGGAGTGGTTCAGAGAAACGA 1668
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1613 AGAAGGGTATATCAAAGAAGGAAGCACAGTAAGTGTGATTGGAGTGGTTCAGAGAAACGA 1672
Query 1669 TAACGTGTTAATGATAGTCCCGACGACAGAACCATTAGCAGCTGGTTGGCAATGGAGTAA 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1673 TAACGTGTTAATGATAGTCCCGACGACAGAACCATTAGCAGCTGGTTGGCAATGGAGTAA 1732
Query 1729 GTGCACATTCCCTGCAAGTCTTGAAGGAATTGTATTGAGATGCGAAGATTCATCGAACGT 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1733 GTGCACATTCCCTGCAAGTCTTGAAGGAATTGTATTGAGATGCGAAGATTCATCGAACGT 1792
Query 1789 AGACGCAATTCCTGTCTGATGCAGTAGTAGT--AAGTCTTTCTTTTGCTTCTTCTTCCAC 1846
||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1793 AGATGCAATTCCTGTCTGATGCAGTAGTAGTGGAAGTCTTTCTTTTCCTTCTTCTTCCAC 1852
Query 1847 GGTTGGTAGACGAAAATCTCACTGTTCCACTTCGGCTTCATTAATATTTTTCATGAAATC 1906
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 1853 GGTTGGTAGACGAAAATTTCACTGCTCCACTTCGGCTTCATTAATATTTTTCATGAAATC 1912
Query 1907 TGAAATGTGTTCTTGGTTGGTGGC-TTTTCGCTCTCTCCTGATGATGATTCCTTTGGTTG 1965
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 1913 TGAAATGTGTTCTTGGTTGGTGGCCTTTTCGCTCTCTACTGATGATGATTCCTTTGGTTG 1972
Query 1966 GTGGTTTATGGTAGTGttttctttttcttttctctttttcctttaatatttcttattttt 2025
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1973 GTGGTTTATGGTAGTGTTTTCTTTTTCTTCTCTCTTTT------AATATTTCTTATTTTT 2026
Query 2026 tATATCGAGTTATTATTACAGTAGGATGATAATGATGATGATGGATGTGGATTTCTTTTC 2085
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2027 TATATCGAGTTATTATTACATTAGGATGATAATGATGATGATGGATGTGGATTTCTTTTC 2086
Query 2086 TACGACTTAATTTGTGTTGTGGGCACTCTTCGTTGCCTT-TGGTTTGTAATT-GTAAAGC 2143
||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||
Sbjct 2087 TACAACTTAATTTGTGTTGTGGGCACTCTTCTTTGCCTTATGGTTTGTAATTTGTAAAGC 2146
Query 2144 TCTGCTAGTAATTCtttttttCGACCTAATTTGTGATCTAATGTAATGGG-ATTATCTTT 2202
||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 2147 TCTGCTAGTTATTCTTTTTT-CGACCTAATTTGTGATCTAATGTAATGGGGATTATCTTT 2205
Query 2203 TTAGTTTGGAATGTACCCGTTGCATGTGGATTGTGTTTATT 2243
|||||||||||||| ||||||||||||||||||| ||||||
Sbjct 2206 TTAGTTTGGAATGTTCCCGTTGCATGTGGATTGTATTTATT 2246
> AT1G78880.1 | Symbols: | Ubiquitin-specific protease family
C19-related protein | chr1:29652633-29655949 REVERSE LENGTH=2246
Length=2246
Score = 3563 bits (1929), Expect = 0.0
Identities = 2156/2261 (95%), Gaps = 33/2261 (1%)
Strand=Plus/Plus
Query 1 GTGTTCTTCACTTTTTCTTTCCTCAGTTGGTTTGTCC-aa-aaaaaaaaTCTCCACCGCT 58
|||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct 1 GTGTTCTTCACTTTTTCTTTCCTCAGTTGG-TTGTCCAAACAAAAAAAATCTCCACCGCT 59
Query 59 CTGAGAGaaaaaaaG-TGG--GA--agag-gagagagagagaCAACGCACCAACTGTTAC 112
||||||| ||||||| ||| || |||| ||||||||| |||||||||||||||||| |
Sbjct 60 CTGAGAG-AAAAAAGTTGGAAGAGGAGAGAGAGAGAGAGCGACAACGCACCAACTGTTGC 118
Query 113 GGCTCAAAGAGATCTCGATCGGGATCCACACGACGgagatagagatagagagtgagagag 172
|||||||||||||||||||||||||||||| |||||||||||| | |||||| | |||||
Sbjct 119 GGCTCAAAGAGATCTCGATCGGGATCCACAAGACGGAGATAGATAGAGAGAGAGTGAGAG 178
Query 173 CTAACGGATATGGGATCTCAGCTACTTGAGTGTTGCTTCCGTTTCGTCTTCTACTGTCAC 232
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 CTAACGGAAATGGGATCTCAGCTACTTGAGTGTTGCTTCCGTTTCGTCTTCTACTGTCAC 238
Query 233 TCCCACAGCTCCAACTGTTTTCCTTGATACTCTTTTTCTTTTCTCTCTGTCCATTT-CTC 291
|||||||||||||||||||||||||||| | |||||||||| |||| | | ||| |||
Sbjct 239 TCCCACAGCTCCAACTGTTTTCCTTGAT--TGTTTTTCTTTTATCTC-GGCGTTTTACTC 295
Query 292 ATGGATTCTT--GTTTTACTCTCTCAGGGATTTGAAATCCTCACTTTTCAGCACATTCTT 349
||| ||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 296 --GGAAGCTTACAACACACTCTCTCAGGGATTTGAAATCCTCACGTTTCAGCACATTCTT 353
Query 350 TGTGGTGCCCATCTATTCTCTAGCCAGTTTC-GAGTTTCCTGAAGAAATCAAATGGGTTC 408
|||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct 354 TGTGGTTCCCATCTATTCTCTAGCCAG-TTCGGAGTTGCCTGAAGAAATCAAATGGGTTC 412
Query 409 AAGATACGCATCCCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGCCCAGAGCAACC 468
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 413 GAGATACGCATCTCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGGCCAGAGCAACC 472
Query 469 CAAAGAAAAGCCTCCAACAATGAGCTCGGTAGCCATGCCATACACCGGTGGTGATATTAA 528
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 473 CAAAGAAAAGCCTCCAACAATGAGCTCAGTAGCCATGCCATACACCGGTGGTGATATCAA 532
Query 529 GAAATCAGGAGAATTAGGGAAGATGTTTGACATTCCGACTGATGGGACTAAGTCAAGGAA 588
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 533 GAAATCAGGAGAATTGGGGAAGATGTTTGACATTCCGACTGATGGGACTAAGTCAAGGAA 592
Query 589 GTCTGGCCCCATAACTGGAGGATCTTCAAGAAGTGGTACGCAATCAGGTCCAGTGCCTAA 648
||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 593 GTCTGGCCCCATAACCGGAGGATCGTCAAGAAGTGGTGCGCAATCAGGTCCAGTGCCTAA 652
Query 649 TGCAACTGGTCGTATGTCTGGTTCTTTAGCTTCTGCTGGCTCAAATTCAATGAAGAAAAC 708
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 653 TGCAACTGGTCGTATGTCTGGCAATTTAGCTTCTGCTGGTTCAAATTCAATGAAGAAAAC 712
Query 709 AAATTCTGGGCCTTTGTCTAAGCACGGGGAGCCTTTAAAGAAATCCTCTGGTCCGCAATC 768
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 713 AAATTCTGGGCCTTTGTCTAAGCATGGGGAGCCTTTAAAGAAATCCTCTGGTCCGCAATC 772
Query 769 CGGTGGTGTAACAAGGCAAAATTCCGGCCCTATTCCTATACTCCCAACTACAGGTCTCAT 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 CGGTGGTGTAACAAGGCAAAATTCCGGCCCTATTCCTATACTCCCAACTACAGGTCTCAT 832
Query 829 AACATCTGGGCCAATTACCTCGGGCCCTCTAAATTCATCTGGGGCTCCTAGGAAAATTTC 888
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 833 AACATCTGGGCCAATTACCTCGGGGCCTCTAAATTCATCTGGGGCTCCTAGGAAAATTTC 892
Query 889 TGGTCCTCTAGACTATTCTGGTTCGATGAAGACACATATGCCTTCAGTTGTCCACAACCA 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 893 TGGTCCTCTAGACTATTCTGGTTCGATGAAGACACATATGCCTTCAGTTGTCCACAACCA 952
Query 949 GGCGGTAACTACCCTTGCTCCGGAAGATGACTTTTCCTGCATGAAGAGCTTCCCCAAGCC 1008
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 953 GGCGGTAACTACCCTTGCTCCGGAAGATGACTTTTCCTGCATGAAAAGCTTCCCCAAGCC 1012
Query 1009 TGTGCTGTGGCTGGTTATACTTATATTTGTAATGGGGTTCCTCGCTGGAGGGTTCATTCT 1068
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1013 TGTGCTGTGGCTGGTTATACTTATATTTGTGATGGGGTTCCTCGCTGGAGGCTTCATTCT 1072
Query 1069 TGGAGCAGTTCACAATGCAATTCTCCTCATTGTTGTTGCGATCTTGTTCACAGTTGTTGC 1128
|||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct 1073 TGGAGCAGTTCACAATGCAATTCTCCTCATAGTTGTGGCGGTCTTGTTCACAGTTGTTGC 1132
Query 1129 TGCACTTTTCATTTGGAATATTTCTTGTGAAAGGCGTGGTATCACAGATTTCATTGCTCG 1188
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1133 TGCACTTTTCATTTGGAATATTTCTTGTGAAAGACGTGGTATCACAGATTTCATCGCTCG 1192
Query 1189 TTATCCTGATGCTGATCTTAGAACTGCCAAAAACGGTCAATATGTGAAGGTCACTGGGGT 1248
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 TTATCCGGATGCTGATCTTAGAACTGCCAAAAACGGTCAATATGTGAAGGTCACTGGGGT 1252
Query 1249 GGTCACTTGTGGTAACGTGCCTCTGGAATCATCCTTCCATAGAGTTCCCAGATGTGTTTA 1308
|||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct 1253 GGTCACCTGTGGTAACGTGCCTCTTGAATCATCCTTCCATAGAGTTCCTAGGTGTGTTTA 1312
Query 1309 CACGTCTACTTGTCTATATGAGTACCGTGGATGGGGTTCAAAGCCAGCCAATGCTTCACA 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1313 CACGTCTACTTGTCTATATGAGTACCGTGGATGGGGTTCAAAGCCAGCCAATGCTTCACA 1372
Query 1369 TCGTCGCTTCACATGGGGACTGAGATCAGCAGAGAGGCATGTGGTAGACTTCTACATTTC 1428
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 TCGTCGCTTTACATGGGGACTGAGATCAGCAGAGAGGCATGTGGTAGACTTCTACATTTC 1432
Query 1429 TGATTTCCAATCTGGGCTCAGAGCATTGGTCAAAACTGGAAACGGTGCAAAGGTAACACC 1488
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1433 TGATTTCCAATCTGGGCTCAGGGCATTGGTCAAAACTGGAAACGGTGCAAAGGTAACACC 1492
Query 1489 TCTCGTCGATGATTCTGTTGTCATCGATTTTAGGCCAGGGAGTGAGCAAGCCTCTCCAGA 1548
|| |||||||||||||||||||||||||||| |||||| | ||||||||||||||||||
Sbjct 1493 GCTTGTCGATGATTCTGTTGTCATCGATTTTAAGCCAGGAAATGAGCAAGCCTCTCCAGA 1552
Query 1549 CTTTGTAAGGTGGTTGGGTAAAAAGAATCTAACCAATGATGATCGAATAATGCGGCTTAA 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1553 CTTTGTAAGGTGGTTGGGTAAAAAGAATCTAACCAATGATGATCGAATAATGCGGCTTAA 1612
Query 1609 AGAAGGGTATATCAAAGAAGGAAGTACAGTGAGTGTGATTGGAGTGGTTCAGAGAAACGA 1668
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1613 AGAAGGGTATATCAAAGAAGGAAGCACAGTAAGTGTGATTGGAGTGGTTCAGAGAAACGA 1672
Query 1669 TAACGTGTTAATGATAGTCCCGACGACAGAACCATTAGCAGCTGGTTGGCAATGGAGTAA 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1673 TAACGTGTTAATGATAGTCCCGACGACAGAACCATTAGCAGCTGGTTGGCAATGGAGTAA 1732
Query 1729 GTGCACATTCCCTGCAAGTCTTGAAGGAATTGTATTGAGATGCGAAGATTCATCGAACGT 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1733 GTGCACATTCCCTGCAAGTCTTGAAGGAATTGTATTGAGATGCGAAGATTCATCGAACGT 1792
Query 1789 AGACGCAATTCCTGTCTGATGCAGTAGTAGT--AAGTCTTTCTTTTGCTTCTTCTTCCAC 1846
||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1793 AGATGCAATTCCTGTCTGATGCAGTAGTAGTGGAAGTCTTTCTTTTCCTTCTTCTTCCAC 1852
Query 1847 GGTTGGTAGACGAAAATCTCACTGTTCCACTTCGGCTTCATTAATATTTTTCATGAAATC 1906
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 1853 GGTTGGTAGACGAAAATTTCACTGCTCCACTTCGGCTTCATTAATATTTTTCATGAAATC 1912
Query 1907 TGAAATGTGTTCTTGGTTGGTGGC-TTTTCGCTCTCTCCTGATGATGATTCCTTTGGTTG 1965
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 1913 TGAAATGTGTTCTTGGTTGGTGGCCTTTTCGCTCTCTACTGATGATGATTCCTTTGGTTG 1972
Query 1966 GTGGTTTATGGTAGTGttttctttttcttttctctttttcctttaatatttcttattttt 2025
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1973 GTGGTTTATGGTAGTGTTTTCTTTTTCTTCTCTCTTTT------AATATTTCTTATTTTT 2026
Query 2026 tATATCGAGTTATTATTACAGTAGGATGATAATGATGATGATGGATGTGGATTTCTTTTC 2085
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2027 TATATCGAGTTATTATTACATTAGGATGATAATGATGATGATGGATGTGGATTTCTTTTC 2086
Query 2086 TACGACTTAATTTGTGTTGTGGGCACTCTTCGTTGCCTT-TGGTTTGTAATT-GTAAAGC 2143
||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||
Sbjct 2087 TACAACTTAATTTGTGTTGTGGGCACTCTTCTTTGCCTTATGGTTTGTAATTTGTAAAGC 2146
Query 2144 TCTGCTAGTAATTCtttttttCGACCTAATTTGTGATCTAATGTAATGGG-ATTATCTTT 2202
||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 2147 TCTGCTAGTTATTCTTTTTT-CGACCTAATTTGTGATCTAATGTAATGGGGATTATCTTT 2205
Query 2203 TTAGTTTGGAATGTACCCGTTGCATGTGGATTGTGTTTATT 2243
|||||||||||||| ||||||||||||||||||| ||||||
Sbjct 2206 TTAGTTTGGAATGTTCCCGTTGCATGTGGATTGTATTTATT 2246
> AT1G16858.1 | Symbols: CPuORF55 | conserved peptide upstream
open reading frame 55 | chr1:5767300-5770602 FORWARD LENGTH=2258
Length=2258
Score = 1528 bits (827), Expect = 0.0
Identities = 1239/1436 (86%), Gaps = 36/1436 (3%)
Strand=Plus/Plus
Query 399 AAATGGGTTCAAGATACGCATCCCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGCC 458
|||||||||| |||||| |||| || ||||||||||||||||| ||||||||||| || |
Sbjct 413 AAATGGGTTCGAGATACCCATCTCATCAGCTCAGCAATGGGCTATTTGTGTCTGGTCGGC 472
Query 459 CAGAGCAACCCAAAGAAAAGCCTCCAACAATGAGCT-CGGTAGCCATGCCATACACCGGT 517
| |||||||||||||||| | ||||||| ||||| | | ||||||||||| ||||| |||
Sbjct 473 CTGAGCAACCCAAAGAAAGGGCTCCAACTATGAG-TGCAGTAGCCATGCCTTACACTGGT 531
Query 518 GGTGATATTAAGAAATCAGGAGAATTAGGGAAGATGTTTGACATTCCGA-CTGATGGGAC 576
|||||||| |||| |||||||||||| |||||||||||||| ||||| | | ||||||||
Sbjct 532 GGTGATATCAAGAGATCAGGAGAATTGGGGAAGATGTTTGATATTCC-AGCAGATGGGAC 590
Query 577 TAAGTCAAGGAAGTCTGGCCCCATAACTGGAGGAT-CTTCAA------G---A--AG-TG 623
|||||| ||||||||||| |||||| | || | | |||||| | | | |
Sbjct 591 TAAGTCCAGGAAGTCTGGTCCCATACCAGG-TGCTCCTTCAAGGTCTGGCTCATTTGCAG 649
Query 624 GTAC-G--CAATCAGGTCCA-GTG--CCTAAT-GCAACTGGTCGTATGTCTGGTTCTTTA 676
| || | |||||||||||| ||| ||| || || ||||| ||||||||||| ||||||
Sbjct 650 GAACTGCACAATCAGGTCCAGGTGCTCCT-ATGGCCACTGGCCGTATGTCTGGCTCTTTA 708
Query 677 GCTTCTGCTGGCTCAAATTCAATGAAGAAAACAAATTCTGGGCCTTTGTCTAAGCACGGG 736
|||||||||||||| ||||||||||||||| ||||| || || || |||||||| ||
Sbjct 709 GCTTCTGCTGGCTCTGTTTCAATGAAGAAAACGAATTCCGGACCATTATCTAAGCATGGA 768
Query 737 GAGCCTTTAAAGAAATCCTCTGGTCCGCAATCCGGTGGTGTAACAAGGCAAAATTCCGGC 796
|||||||| |||||||| ||||| || ||||| ||||||||||| | |||||||| ||
Sbjct 769 GAGCCTTTGAAGAAATCATCTGGCCCTCAATCTGGTGGTGTAACTCGCCAAAATTCTGGT 828
Query 797 CCTATTCCTATACTCCCAACTACAGGTCTCATAACATCTGGGCCAATTACCTCGGGCCCT 856
|||||||||| || ||| ||||||||||||| || |||||||| ||||| || ||||||
Sbjct 829 TCTATTCCTATTCTTCCAGCTACAGGTCTCATTACCTCTGGGCCTATTACATCAGGCCCT 888
Query 857 CTAAATTCATCTGGGGCTCCTAGGAAAATTTCTGGTCCTCTAGACTATTCTGGTTCGATG 916
|| ||||||||||||||||| ||||| |||||||||| ||||||| |||||||| ||||
Sbjct 889 CTGAATTCATCTGGGGCTCCCAGGAAGGTTTCTGGTCCACTAGACTCTTCTGGTTTGATG 948
Query 917 AAGACACATATGCCTTCAGTTGTCCACAACCAGGCGGTAACTACCCTTGCTCCGGAAGAT 976
||| ||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 949 AAGTCACATATGCCTACTGTTGTCCACAACCAGGCGGTAACTACCCTTGGTCCAGAAGAT 1008
Query 977 GACTTTTCCTGCATGAAGAGCTTCCCCAAGCCTGTGCTGTGGCTGGTTATACTTATATTT 1036
|||||||||||| |||||||||| || ||||||||||||||||||||| | ||||||||
Sbjct 1009 GACTTTTCCTGCCTGAAGAGCTTTCCAAAGCCTGTGCTGTGGCTGGTTGTTCTTATATTC 1068
Query 1037 GTAATGGGGTTCCTCGCTGGAGGGTTCATTCTTGGAGCAGTTCACAATGCAATTCTCCTC 1096
| ||||||||||| |||||||| ||||||||||| ||||||||||| ||||||||||
Sbjct 1069 ATTATGGGGTTCCTTGCTGGAGGCTTCATTCTTGGTGCAGTTCACAACCCAATTCTCCTT 1128
Query 1097 ATTGTTGTTGCGATCTTGTTCACAGTTGTTGCTGCACTTTTCATTTGGAATATTTCTTGT 1156
||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1129 GTTGTTGTCGCCATCTTGTTCACAGTTGTTGCTGCACTTTTCATTTGGAATATTTGTTGG 1188
Query 1157 GAAAGGCGTGGTATCACAGATTTCATTGCTCGTTATCCTGATGCTGATCTTAGAACTGCC 1216
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1189 GGAAGACGTGGTATCACAGATTTCATTGCTCGTTATCCTGATGCTGATCTTAGAACTGCC 1248
Query 1217 AAAAACGGTCAATATGTGAAGGTCACTGGGGTGGTCACTTGTGGTAACGTGCCTCTGGAA 1276
||||| |||||| | |||||||||||||||||||| ||||||||||| || || || ||
Sbjct 1249 AAAAATGGTCAACACGTGAAGGTCACTGGGGTGGTAACTTGTGGTAATGTACCGCTTGAG 1308
Query 1277 TCATCCTTCCATAGAGTTCCCAGATGTGTTTACACGTCTACTTGTCTATATGAGTACCGT 1336
||||||||||| ||||||||||||||||| ||||| || || |||||||||||||| |||
Sbjct 1309 TCATCCTTCCACAGAGTTCCCAGATGTGTGTACACATCGACATGTCTATATGAGTATCGT 1368
Query 1337 GGATGGGGTTC-AAAGCCAGCCAATGCTTCACATCGTCGCTTCACATGGGGACTGAGATC 1395
||||||||||| ||| ||||||||| |||| ||||||| |||||||||||||||||||||
Sbjct 1369 GGATGGGGTTCGAAA-CCAGCCAATTCTTCCCATCGTCACTTCACATGGGGACTGAGATC 1427
Query 1396 AGCAGAGAGGCATGTGGTAGACTTCTACATTTCTGATTTCCAATCTGGGCTCAGAGCATT 1455
| ||||||| |||||||| ||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct 1428 ATCAGAGAGACATGTGGTGGACTTTTACATCTCTGATTTCCAGTCTGGGCTCAGAGCCTT 1487
Query 1456 GGTCAAAACTGGAAACGGTGCAAAGGTAACACCTCTCGTCGATGATTCTGTTGTCATCGA 1515
|||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1488 AGTCAAAACCGGAAGCGGTGCAAAGGTAACACCTCTTGTAGATGATTCTGTTGTCATCGA 1547
Query 1516 TTTTAGGCCAGGGAGTGAGCAAGCCTCTCCAGACTTTGTAAGGTGGTTGGGTAAAAAGAA 1575
|| | || ||| || ||||||| ||||| || |||||| | ||||| || || |||||
Sbjct 1548 CTTCAAGCAAGGAAGCGAGCAAGTGTCTCCCGATTTTGTACGATGGTTAGGCAAGAAGAA 1607
Query 1576 TCTAACCAAT-GATGATCGAATAATGCGGCTTAAAGAAGGGTATATCAAAGAAGGAAGTA 1634
|||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 1608 TCTAAC-AAGCGATGATCGAATAATGCGGCTCAAAGAAGGGTATATAAAAGAAGGAAGTA 1666
Query 1635 CAGTGAGTGTGATTGGAGTGGTTCAGAGAAACGATAACGTGTTAATGATAGTCCCGA-CG 1693
|||||||||||||||||||||| |||||||||||||| ||||| |||||||| || | |
Sbjct 1667 CAGTGAGTGTGATTGGAGTGGTGCAGAGAAACGATAATGTGTTGATGATAGTTCC-ATC- 1724
Query 1694 A-CAGAACCATTAGCAGCTGGTTGGCAATGGAGTA-AGTGCACATTCCCTGCAAGTCTTG 1751
| |||| ||| |||||||||||||||||||||| | | ||||||||||| |||||||||
Sbjct 1725 ATCAGAGCCACTAGCAGCTGGTTGGCAATGGAGGAGA-TGCACATTCCCAACAAGTCTTG 1783
Query 1752 AAGGAATTGTATTGAGATGCGAAGATTCATCGAACGTAGACGCAATTCCTGTCTGA 1807
||||||| ||||||||||| ||||| ||||| || || || || || || || |||
Sbjct 1784 AAGGAATAGTATTGAGATGTGAAGACTCATCCAATGTTGATGCCATACCGGTTTGA 1839
> AT1G16860.1 | Symbols: | Ubiquitin-specific protease family
C19-related protein | chr1:5767300-5770602 FORWARD LENGTH=2258
Length=2258
Score = 1528 bits (827), Expect = 0.0
Identities = 1239/1436 (86%), Gaps = 36/1436 (3%)
Strand=Plus/Plus
Query 399 AAATGGGTTCAAGATACGCATCCCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGCC 458
|||||||||| |||||| |||| || ||||||||||||||||| ||||||||||| || |
Sbjct 413 AAATGGGTTCGAGATACCCATCTCATCAGCTCAGCAATGGGCTATTTGTGTCTGGTCGGC 472
Query 459 CAGAGCAACCCAAAGAAAAGCCTCCAACAATGAGCT-CGGTAGCCATGCCATACACCGGT 517
| |||||||||||||||| | ||||||| ||||| | | ||||||||||| ||||| |||
Sbjct 473 CTGAGCAACCCAAAGAAAGGGCTCCAACTATGAG-TGCAGTAGCCATGCCTTACACTGGT 531
Query 518 GGTGATATTAAGAAATCAGGAGAATTAGGGAAGATGTTTGACATTCCGA-CTGATGGGAC 576
|||||||| |||| |||||||||||| |||||||||||||| ||||| | | ||||||||
Sbjct 532 GGTGATATCAAGAGATCAGGAGAATTGGGGAAGATGTTTGATATTCC-AGCAGATGGGAC 590
Query 577 TAAGTCAAGGAAGTCTGGCCCCATAACTGGAGGAT-CTTCAA------G---A--AG-TG 623
|||||| ||||||||||| |||||| | || | | |||||| | | | |
Sbjct 591 TAAGTCCAGGAAGTCTGGTCCCATACCAGG-TGCTCCTTCAAGGTCTGGCTCATTTGCAG 649
Query 624 GTAC-G--CAATCAGGTCCA-GTG--CCTAAT-GCAACTGGTCGTATGTCTGGTTCTTTA 676
| || | |||||||||||| ||| ||| || || ||||| ||||||||||| ||||||
Sbjct 650 GAACTGCACAATCAGGTCCAGGTGCTCCT-ATGGCCACTGGCCGTATGTCTGGCTCTTTA 708
Query 677 GCTTCTGCTGGCTCAAATTCAATGAAGAAAACAAATTCTGGGCCTTTGTCTAAGCACGGG 736
|||||||||||||| ||||||||||||||| ||||| || || || |||||||| ||
Sbjct 709 GCTTCTGCTGGCTCTGTTTCAATGAAGAAAACGAATTCCGGACCATTATCTAAGCATGGA 768
Query 737 GAGCCTTTAAAGAAATCCTCTGGTCCGCAATCCGGTGGTGTAACAAGGCAAAATTCCGGC 796
|||||||| |||||||| ||||| || ||||| ||||||||||| | |||||||| ||
Sbjct 769 GAGCCTTTGAAGAAATCATCTGGCCCTCAATCTGGTGGTGTAACTCGCCAAAATTCTGGT 828
Query 797 CCTATTCCTATACTCCCAACTACAGGTCTCATAACATCTGGGCCAATTACCTCGGGCCCT 856
|||||||||| || ||| ||||||||||||| || |||||||| ||||| || ||||||
Sbjct 829 TCTATTCCTATTCTTCCAGCTACAGGTCTCATTACCTCTGGGCCTATTACATCAGGCCCT 888
Query 857 CTAAATTCATCTGGGGCTCCTAGGAAAATTTCTGGTCCTCTAGACTATTCTGGTTCGATG 916
|| ||||||||||||||||| ||||| |||||||||| ||||||| |||||||| ||||
Sbjct 889 CTGAATTCATCTGGGGCTCCCAGGAAGGTTTCTGGTCCACTAGACTCTTCTGGTTTGATG 948
Query 917 AAGACACATATGCCTTCAGTTGTCCACAACCAGGCGGTAACTACCCTTGCTCCGGAAGAT 976
||| ||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 949 AAGTCACATATGCCTACTGTTGTCCACAACCAGGCGGTAACTACCCTTGGTCCAGAAGAT 1008
Query 977 GACTTTTCCTGCATGAAGAGCTTCCCCAAGCCTGTGCTGTGGCTGGTTATACTTATATTT 1036
|||||||||||| |||||||||| || ||||||||||||||||||||| | ||||||||
Sbjct 1009 GACTTTTCCTGCCTGAAGAGCTTTCCAAAGCCTGTGCTGTGGCTGGTTGTTCTTATATTC 1068
Query 1037 GTAATGGGGTTCCTCGCTGGAGGGTTCATTCTTGGAGCAGTTCACAATGCAATTCTCCTC 1096
| ||||||||||| |||||||| ||||||||||| ||||||||||| ||||||||||
Sbjct 1069 ATTATGGGGTTCCTTGCTGGAGGCTTCATTCTTGGTGCAGTTCACAACCCAATTCTCCTT 1128
Query 1097 ATTGTTGTTGCGATCTTGTTCACAGTTGTTGCTGCACTTTTCATTTGGAATATTTCTTGT 1156
||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1129 GTTGTTGTCGCCATCTTGTTCACAGTTGTTGCTGCACTTTTCATTTGGAATATTTGTTGG 1188
Query 1157 GAAAGGCGTGGTATCACAGATTTCATTGCTCGTTATCCTGATGCTGATCTTAGAACTGCC 1216
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1189 GGAAGACGTGGTATCACAGATTTCATTGCTCGTTATCCTGATGCTGATCTTAGAACTGCC 1248
Query 1217 AAAAACGGTCAATATGTGAAGGTCACTGGGGTGGTCACTTGTGGTAACGTGCCTCTGGAA 1276
||||| |||||| | |||||||||||||||||||| ||||||||||| || || || ||
Sbjct 1249 AAAAATGGTCAACACGTGAAGGTCACTGGGGTGGTAACTTGTGGTAATGTACCGCTTGAG 1308
Query 1277 TCATCCTTCCATAGAGTTCCCAGATGTGTTTACACGTCTACTTGTCTATATGAGTACCGT 1336
||||||||||| ||||||||||||||||| ||||| || || |||||||||||||| |||
Sbjct 1309 TCATCCTTCCACAGAGTTCCCAGATGTGTGTACACATCGACATGTCTATATGAGTATCGT 1368
Query 1337 GGATGGGGTTC-AAAGCCAGCCAATGCTTCACATCGTCGCTTCACATGGGGACTGAGATC 1395
||||||||||| ||| ||||||||| |||| ||||||| |||||||||||||||||||||
Sbjct 1369 GGATGGGGTTCGAAA-CCAGCCAATTCTTCCCATCGTCACTTCACATGGGGACTGAGATC 1427
Query 1396 AGCAGAGAGGCATGTGGTAGACTTCTACATTTCTGATTTCCAATCTGGGCTCAGAGCATT 1455
| ||||||| |||||||| ||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct 1428 ATCAGAGAGACATGTGGTGGACTTTTACATCTCTGATTTCCAGTCTGGGCTCAGAGCCTT 1487
Query 1456 GGTCAAAACTGGAAACGGTGCAAAGGTAACACCTCTCGTCGATGATTCTGTTGTCATCGA 1515
|||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1488 AGTCAAAACCGGAAGCGGTGCAAAGGTAACACCTCTTGTAGATGATTCTGTTGTCATCGA 1547
Query 1516 TTTTAGGCCAGGGAGTGAGCAAGCCTCTCCAGACTTTGTAAGGTGGTTGGGTAAAAAGAA 1575
|| | || ||| || ||||||| ||||| || |||||| | ||||| || || |||||
Sbjct 1548 CTTCAAGCAAGGAAGCGAGCAAGTGTCTCCCGATTTTGTACGATGGTTAGGCAAGAAGAA 1607
Query 1576 TCTAACCAAT-GATGATCGAATAATGCGGCTTAAAGAAGGGTATATCAAAGAAGGAAGTA 1634
|||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 1608 TCTAAC-AAGCGATGATCGAATAATGCGGCTCAAAGAAGGGTATATAAAAGAAGGAAGTA 1666
Query 1635 CAGTGAGTGTGATTGGAGTGGTTCAGAGAAACGATAACGTGTTAATGATAGTCCCGA-CG 1693
|||||||||||||||||||||| |||||||||||||| ||||| |||||||| || | |
Sbjct 1667 CAGTGAGTGTGATTGGAGTGGTGCAGAGAAACGATAATGTGTTGATGATAGTTCC-ATC- 1724
Query 1694 A-CAGAACCATTAGCAGCTGGTTGGCAATGGAGTA-AGTGCACATTCCCTGCAAGTCTTG 1751
| |||| ||| |||||||||||||||||||||| | | ||||||||||| |||||||||
Sbjct 1725 ATCAGAGCCACTAGCAGCTGGTTGGCAATGGAGGAGA-TGCACATTCCCAACAAGTCTTG 1783
Query 1752 AAGGAATTGTATTGAGATGCGAAGATTCATCGAACGTAGACGCAATTCCTGTCTGA 1807
||||||| ||||||||||| ||||| ||||| || || || || || || || |||
Sbjct 1784 AAGGAATAGTATTGAGATGTGAAGACTCATCCAATGTTGATGCCATACCGGTTTGA 1839
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 111294608265
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5