BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477059
Length=3393
Score E
Sequences producing significant alignments: (Bits) Value
AT1G78920.1 | Symbols: AVP2, AVPL1, AtVHP2;1, VHP2;1, VP2 | vac... 4802 0.0
AT1G16780.1 | Symbols: VHP2;2, AtVHP2;2 | Inorganic H pyrophosp... 3090 0.0
AT1G78922.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 531 2e-149
> AT1G78920.1 | Symbols: AVP2, AVPL1, AtVHP2;1, VHP2;1, VP2 | vacuolar
H+-pyrophosphatase 2 | chr1:29671493-29676992 FORWARD
LENGTH=3093
Length=3093
Score = 4802 bits (2600), Expect = 0.0
Identities = 2815/2917 (97%), Gaps = 22/2917 (1%)
Strand=Plus/Plus
Query 1 GTAGCAAAGTTAATTTAGGaaaaaaaTATTCCGAAAGTTCTCTGAAAAGTCTTCGGATTT 60
|||| ||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 19 GTAGAAAAATTAATTTAGGAAAAAAATATTCGGAAAGTTCTGTGAAAAGTCTTCGGATTT 78
Query 61 AGAACGgagagagagagaggagagagCGCTTCTTCGGCTAGGACAAGCTTTCGCTAATGG 120
|||||||||| || ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 79 AGAACGGAGACAGCGAGAGGATAGAGCGCTTCTTCGGCTACAACAAGCTTTCGCTAATGG 138
Query 121 CGCTTTCCTTCTGATCA--CTCACCGGAGCCGTCATCTTCTCTGTTTTTACTGATTTTTA 178
|| |||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||
Sbjct 139 CGGTTTCCTTCTGATCACTCTCACCGGAGCCGTCATCTTCTCTG-TTTTACCGATTTTTA 197
Query 179 GG-AATTGTGTTTATAGTGGGAACTTTGTTGTGGCAACTCTACTGAGAAAGTTTGAAGAA 237
|| |||| || || | |||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 198 GGAAATTTTGATTGTGGTGGAAAC-TTGTTGTGGCAACTCTACTGAGAAAGTTTGAAGAA 256
Query 238 GCTGGAATC-AAGATATAGCTAGAGTTAAGAGGGTTCATACTAACTTGTGTTCGCTTTT- 295
||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 257 GCTGGAATCAAAGATATAGCTAGAGTTAAGAGGGTTCATACTAACTTGTGCTCG-TTTTG 315
Query 296 CGATGTGC---TGTTAACATTT---GG----A---G-AGTGCATCAAAATTCAGCGTCCT 341
||||||| ||||||| ||| || | | |||| || ||||||||||||||
Sbjct 316 TGATGTGCTGTTGTTAACGTTTGGAGGAAAAAGTTGTAGTGTATTAAAATTCAGCGTCCG 375
Query 342 AGTTCTGGGGCTGAGTTGCCCCATAGCATTGATTTTACACCTCTACCCATAGTCCCAAGG 401
||||||||||| |||||||||||||||||||| ||||| ||||||| |||||||| ||||
Sbjct 376 AGTTCTGGGGCGGAGTTGCCCCATAGCATTGACTTTACGCCTCTACACATAGTCCGAAGG 435
Query 402 GCAAATTCAGCTCAAAACATGATGATGGATGAAGATATTGAGCAGGCCAGTTTGATGTCT 461
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 436 GCTAATTCAGCTCAAAACATGATGATGGATGAAGATGTTGAGCAGGCCAGTTTGATGTCT 495
Query 462 TTCAATGACAGGCCTAGGGCTTTTCCCAACATGCGTAGTAAAACCTATAGTCCACTGATA 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 TTCAATGACAGGCCTAGGGCTTTTCCCAACATGCGTAGTAAAACCTATAGTCCACTGATA 555
Query 522 TTCCGGATTCTTAGGAAATTAAATGTCCGTGTCCTTTCGATAATTCTGCTTTTCTGCTTT 581
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 TTCCGGATTATTAGGAAATTAAATGTCCGTGTCCTTTCGATAATTCTGCTTTTCTGCTTC 615
Query 582 GGAGCGATCTTTTACGTGGGAGCAAGTACTTCTCCCATAATCGTGTTCGTCTTCGCAGTA 641
||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||| |||||
Sbjct 616 GGAGCAATCTTTTACATGGGGGCAAGTACTTCTCCCATCATCGTGTTCGTCTTCACAGTA 675
Query 642 TGCATCATCAGCTTTCTTTTGTCCATATATCTAACCAAGTGGGTTTTAGCGAAAGATGAA 701
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 676 TGCATCATCAGCTTCCTTTTGTCAATATATCTAACCAAGTGGGTTTTAGCGAAAGATGAA 735
Query 702 GGACCTCCAGAGATGGTTGAGATATCAGATGCTATACGTGATGGAGCTGAAGGGTTTTTC 761
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 736 GGACCTCCAGAGATGGTTGAGATATCAGATGCTATACGTGATGGAGCTGAAGGTTTTTTC 795
Query 762 AGAACGCAGTATAGCACTATATCCAAGATGGCTGTCTTGCTAGCTTTTGTGATTCTTTGC 821
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 796 AGAACGCAGTATAGCACTATATCCAAGATGGCCATTTTGCTAGCTTTTGTGATTCTTTGC 855
Query 822 ATATATCTATTCCGTAGCTTAACTCCCCAGCAAGAGGCTGCTGGTTTAGGAAGGGCGATG 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 856 ATATATCTATTCCGTAGCTTAACTCCCCAGCAAGAGGCTGCTGGTTTAGGAAGGGCGATG 915
Query 882 TCTGCCTATATTACTGTTGCTGCATTTCTTTTGGGGGCTCTATGCTCAGGTATTGCTGGA 941
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 916 TCTGCTTATATTACTGTTGCTGCATTTCTTTTGGGGGCTCTATGCTCAGGTATTGCTGGA 975
Query 942 TATGTTGGAATGTGGGTGTCAGTTCGTGCTAATGTGCGGGTCTCCAGTGCTGCCAGACGA 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 976 TATGTTGGAATGTGGGTGTCAGTTCGTGCTAATGTGCGGGTCTCCAGTGCTGCCAGACGA 1035
Query 1002 TCTGCGAGAGAAGCATTGCAGATAGCCGTTCGTGCTGGTGGGTTTTCAGCCCTGGTTGTT 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 TCTGCGAGAGAAGCATTGCAGATAGCCGTTCGTGCTGGTGGGTTTTCAGCCCTGGTTGTT 1095
Query 1062 GTTGGTATGGCTGTGATTGGTATCGCCATCCTCTATTCTACATTTTATGTTTGGTTGGGC 1121
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1096 GTTGGTATGGCTGTGATTGGTATCGCCATCCTCTATTCTACATTTTATGTGTGGTTGGGC 1155
Query 1122 GTGGATTCACCAGGCTCAATGAATGTTACTGACCTGCCTCTGCTTCTCGTGGGATATGGT 1181
|||| |||||||||||||||||||||||||||||| ||||| ||||| || |||||||||
Sbjct 1156 GTGGGTTCACCAGGCTCAATGAATGTTACTGACCTACCTCTTCTTCTTGTCGGATATGGT 1215
Query 1182 TTTGGTGCTTCGTTTGTTGCCTTATTTGCTCAGTTGGGTGGTGGAATATATACTAAGGGA 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1216 TTTGGTGCTTCGTTTGTTGCCTTATTTGCTCAGTTGGGTGGTGGAATATATACTAAGGGA 1275
Query 1242 GCTGATGTTGGGGCAGATCTCGTTGGGAAAGTTGAGCAGGGAATTCCCGAGGATGATCCT 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1276 GCTGATGTTGGGGCAGATCTCGTTGGGAAAGTTGAGCAGGGAATTCCCGAGGATGATCCT 1335
Query 1302 CGAAATCCTGCTGTTATTGCTGATTTGGTTGGAGACAATGTGGGGGACTGTGCTGCTAGA 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1336 CGAAATCCTGCTGTTATTGCTGATTTGGTTGGAGACAATGTGGGGGACTGTGCTGCTAGA 1395
Query 1362 GGTGCTGATTTATTTGAAAGTATAGCTGCAGAAATCATCAGTGCAATGATACTAGGTGGA 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396 GGTGCTGATTTATTTGAAAGTATAGCTGCAGAAATCATCAGTGCAATGATACTAGGTGGA 1455
Query 1422 ACAATGGCTAAGAAGTGCAAAATTGAAGATCCATCAGGCTTTATCCTTTTTCCTCTAGTT 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1456 ACAATGGCTAAGAAGTGCAAAATTGAAGATCCATCAGGCTTTATCCTTTTTCCTCTAGTT 1515
Query 1482 GTTCATTCTTTTGACTTGATTATATCATCAATTGGTATTCTATCAATCAAGGGAACACGT 1541
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1516 GTTCATTCTTTTGACTTGATTATATCCTCAATTGGTATTCTATCAATCAAGGGAACACGT 1575
Query 1542 GATGCCAGTGTGAAATCTCCGGTAGAGGATCCAATGGCTGTACTTCAGAGAGGATATTCT 1601
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1576 GATGCTAGTGTGAAATCTCCGGTAGAGGATCCAATGGCTGTACTTCAGAAAGGATATTCT 1635
Query 1602 CTGACTATTATATTAGCTGTTTTGACATTTGGCGCGTCGACTCGCTGGCTGCTTTACACT 1661
||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 1636 CTGACAATTATATTAGCTGTTATAACATTTGGCGCGTCGACTCGCTGGCTGCTTTACACT 1695
Query 1662 GAACAGGCTCCATCTGCATGGTTCAATTTCGCCCTATGTGGGTTGGTTGGCATCATCACA 1721
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1696 GAACAAGCTCCATCTGCATGGTTCAATTTCGCCCTATGTGGGTTGGTTGGCATCATCACA 1755
Query 1722 GCCTATATCTTTGTCTGGATATCCAAATATTATACAGACTATAAGCACGAGCCTGTTCGA 1781
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1756 GCCTATATCTTTGTCTGGATATCCAAATATTATACAGACTATAAGCACGAGCCTGTTCGG 1815
Query 1782 ACGTTGGCTCTTGCTAGCTCGACTGGTCATGGGACTAATATCATTGCTGGGGTCAGCTTG 1841
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1816 ACGTTGGCTCTTGCTAGCTCGACTGGTCATGGGACTAATATCATTGCTGGAGTAAGCTTG 1875
Query 1842 GGCCTGGAATCAACTGCTCTTCCAGTTTTGACTATAAGTGTAGCTATTATTTCTGCGTAT 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1876 GGCCTGGAATCAACTGCTCTTCCAGTTTTGACTATAAGTGTAGCTATTATTTCTGCGTAT 1935
Query 1902 TGGCTGGGCAATACCTCGGGACTAGTGGACGAAAATGGCATTCCCACTGGAGGTCTATTT 1961
||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1936 TGGTTGGGCAATACCTCGGGTCTAGTGGACGAAAATGGTATTCCCACTGGAGGTCTATTT 1995
Query 1962 GGAACAGCCGTTGCTACAATGGGAATGCTAAGCACTGCAGCTTATGTCCTTACTATGGAC 2021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 GGAACAGCCGTTGCTACAATGGGAATGCTAAGCACTGCAGCTTATGTCCTTACTATGGAC 2055
Query 2022 ATGTTTGGCCCCATAGCTGACAACGCTGGTGGGATTGTCGAGATGAGCCAGCAGCCAGAA 2081
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2056 ATGTTTGGCCCCATAGCTGACAACGCTGGTGGGATTGTCGAGATGAGCCAGCAGCCAGAG 2115
Query 2082 AGTGTCCGTGAGATCACTGATCTTCTTGATGCTGTTGGGAACACCACAAAAGCAACAACG 2141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2116 AGTGTCCGTGAGATCACTGATCTTCTTGATGCTGTTGGGAACACCACAAAAGCAACAACG 2175
Query 2142 AAAGGGTTTGCCATTGGATCTGCTGCCCTTGCGTCATTCCTTCTCTTTAGTGCGTATATG 2201
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 2176 AAAGGGTTTGCCATTGGATCTGCTGCACTTGCATCATTCCTTCTCTTTAGTGCGTATATG 2235
Query 2202 GACGAGGTTTCAGCGTTTGCTAATGTGTCTTTCAAAGAGGTTGATATTGCTATCCCAGAA 2261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2236 GACGAGGTTTCAGCGTTTGCTAATGTGTCTTTCAAAGAGGTTGATATTGCTATCCCAGAA 2295
Query 2262 GTGTTCGTAGGTGGGTTATTGGGTTCCATGCTTATTTTCCTCTTTAGTGCTTGGGCATGT 2321
|||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2296 GTGTTCGTTGGTGGATTATTGGGTGCCATGCTTATTTTCCTCTTTAGTGCTTGGGCATGC 2355
Query 2322 GCGGCAGTTGGTCGAACTGCACAAGAGGTTGTCAACGAAGTAAGAAGACAATTTATTGAG 2381
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2356 GCGGCAGTTGGTCGAACTGCACAAGAGGTTGTCAACGAAGTAAGAAGGCAATTTATTGAG 2415
Query 2382 AGGCCTGGCATAATGGAGTACAAGGAGAAGCCAGATTATAGTCGCTGTGTCGCCATTGTC 2441
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2416 AGGCCTGGCATAATGGAGTACAAGGAGAAGCCAGATTATAGTCGCTGTGTCGCCATAGTC 2475
Query 2442 GCATCTGCAGCTTTAAGGGAAATGATAAAGCCAGGAGCTTTAGCTATTGCATCACCCATT 2501
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2476 GCATCTGCAGCTTTAAGAGAAATGATAAAGCCAGGAGCTTTAGCTATTGCATCACCCATT 2535
Query 2502 GTAGTTGGTTTGGTTTTTCGGATTTTGGGTTACTACACAGGACAACCTCTGCTCGGAGCA 2561
|||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 2536 GTAGTTGGTTTGGTGTTTCGAATCTTGGGTTACTACACAGGACAACCTCTGCTCGGAGCA 2595
Query 2562 AAAGTTGTAGCTTCTATGCTCATGTTTGCAACAGTTTGTGGTATCTTAATGGCACTTTTC 2621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2596 AAAGTTGTAGCTTCTATGCTCATGTTTGCAACAGTTTGTGGTATCTTAATGGCACTTTTC 2655
Query 2622 CTAAACACGGCGGGAGGTGCTTGGGACAATGCAAAGAAATACATAGAGACTGGGGCACTT 2681
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2656 CTAAACACGGCGGGAGGTGCTTGGGACAATGCAAAGAAATACATAGAGACCGGGGCACTT 2715
Query 2682 GGGGGGAAAGGAAGTGAAGCCCACAAAGCAGCTGTGACTGGTGATACCGTGGGAGATCCG 2741
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2716 GGGGGCAAAGGAAGTGAAGCTCACAAAGCAGCTGTGACTGGTGATACCGTGGGAGATCCG 2775
Query 2742 TTCAAGGACACAGCCGGTCCATCCATTCACGTCCTCATAAAAATGCTCGCGACTATAACT 2801
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2776 TTCAAGGACACAGCCGGTCCATCCATTCACGTCCTCATAAAAATGCTTGCGACTATAACT 2835
Query 2802 CTCGTCATGGCTCCGGTTTTCCTCTGAAAGTGAACCGTTACTTATCCATCCCGGCTTATA 2861
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2836 CTCGTCATGGCTCCGGTTTTCCTCTGAAAGTGAACCGTTACTTATCCATCCCGGCTTATT 2895
Query 2862 TACTCTCTTGCACATATACAAATAGAGAGGGAGAGAG 2898
|||||||||||||||||||||||||||||||||||||
Sbjct 2896 TACTCTCTTGCACATATACAAATAGAGAGGGAGAGAG 2932
> AT1G16780.1 | Symbols: VHP2;2, AtVHP2;2 | Inorganic H pyrophosphatase
family protein | chr1:5739299-5744214 REVERSE LENGTH=2839
Length=2839
Score = 3090 bits (1673), Expect = 0.0
Identities = 2239/2517 (89%), Gaps = 20/2517 (1%)
Strand=Plus/Plus
Query 324 ATCAAAATTCAGCGTCCTAGTTCTGGGGCTGAGTTGCCCCATAGCATTGATTTTACACCT 383
||||| ||||||||||| ||||||||||||||| |||||| ||||| | ||||| ||||
Sbjct 166 ATCAAGATTCAGCGTCCAAGTTCTGGGGCTGAGCTGCCCCGTAGCACGGGTTTTATACCT 225
Query 384 CTACCCATAGTCCCAAGGGCAAATTCAGCT-CAAAACATGATGATGGATGAAGATATTGA 442
|| ||| | || | ||||||||||| | | |||||||||||||||||||||||| ||||
Sbjct 226 CTTCCCCTTGTTCGGAGGGCAAATTC-GTTACAAAACATGATGATGGATGAAGATGTTGA 284
Query 443 GCAGGCCAGTTTGATGTCTTTCAATGACAGGCCTAGGGCTTTTCCC-AACATGCGTAGTA 501
|||||||| | || | |||| || ||||| ||| ||| | ||||| | ||||||||||
Sbjct 285 GCAGGCCACTCTGGTTTCTTACAGTGACAAGCCAAGGAC-CTTCCCGGATATGCGTAGTA 343
Query 502 AAACCTATAGTCCACTGATATTCCGGATTCTTAGGAAA-TTAAATGTCCGTGTCCTTTC- 559
|||| || |||||| ||||| |||| ||||| | |||| |||||||| |||| ||||||
Sbjct 344 AAACTTACAGTCCATTGATAATCCGCATTCTGA-GAAATTTAAATGTTCGTGCCCTTTCT 402
Query 560 GATAATTCTGCTTTTCTGCTTTGGAGCGATCTTTTACGTGGGAGCAAGTACTTCTCCCAT 619
| || |||||||||| ||||||||| |||||||||| |||||||| |||||||||||||
Sbjct 403 G-TACTTCTGCTTTTGAGCTTTGGAGGGATCTTTTACATGGGAGCACGTACTTCTCCCAT 461
Query 620 AATCGTGTTCGTCTTCGCAGTATGCATCATCAGCTTTC-TTTTGTCCA-TATATCTAACC 677
|| ||||||||||| | ||||||||||||||| |||| | |||| || |||| || |||
Sbjct 462 CATTGTGTTCGTCTTTGTAGTATGCATCATCAG-TTTCATGTTGT-CAGTATACCTGACC 519
Query 678 AAGTGGGTTTTAGCGAAAGATGAAGGACCTCCAGAGATGGTTGAGATATCAGATGCTATA 737
|||||||| ||||| |||||||||||||||||||| |||||| |||||||||||||||||
Sbjct 520 AAGTGGGTATTAGCCAAAGATGAAGGACCTCCAGAAATGGTTCAGATATCAGATGCTATA 579
Query 738 CGTGATGGAGCTGAAGGGTTTTTCAGAACGCAGTATAGCACTATATCCAAGATGGCTG-T 796
||||||||||||||||| ||||| |||||||||||| | ||||||||||| ||||| | |
Sbjct 580 CGTGATGGAGCTGAAGGATTTTTAAGAACGCAGTATGGTACTATATCCAAAATGGC-GTT 638
Query 797 CTTGCTAGCTTTTGTGATTCTTTGCATATATC-TATTCCGTAGCTTAACTCCCCAGCAAG 855
|||||||||||||||||| ||||||||||| | | ||||||| |||||| ||||||||||
Sbjct 639 CTTGCTAGCTTTTGTGATCCTTTGCATATA-CTTGTTCCGTAACTTAACCCCCCAGCAAG 697
Query 856 AGGCTGCTGGTTTAGGAAGGGCGATGTCTGCCTATATTACTGTTGCTGCATTTCTTTTGG 915
||||| |||||||||||||| | |||||||| || |||||||||||||||||||||||||
Sbjct 698 AGGCTTCTGGTTTAGGAAGGACAATGTCTGCATACATTACTGTTGCTGCATTTCTTTTGG 757
Query 916 GGGCTCTATGCTCAGGTATTGCTGGATATGTTGGAATGTGGGTGTCAGTTCGTGCTAATG 975
| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 758 GTGCGCTATGTTCAGGTATTGCTGGATATGTTGGAATGTGGGTGTCAGTTCGTGCTAATG 817
Query 976 TGCGGGTCTCCAGTGCTGCCAGACGATCTGCGAGAGAAGCATTGCAGATAGCCGTTCGTG 1035
| ||||| ||||||||||| |||||||| || || ||||||||||||||||| |||||||
Sbjct 818 TACGGGTTTCCAGTGCTGCTAGACGATCCGCAAGGGAAGCATTGCAGATAGCTGTTCGTG 877
Query 1036 CTGGTGGGTTTTCAGCCCTGGTTGTTGTTGGTATGGCTGTGATTGGTATCGCCATCCTCT 1095
||||||| || ||||| |||||||||||||||||||||||||||||||| |||||||| |
Sbjct 878 CTGGTGGATTCTCAGCTCTGGTTGTTGTTGGTATGGCTGTGATTGGTATTGCCATCCTGT 937
Query 1096 ATTCTACATTTTATGTTTGGTTGGGCGTGGATTCACCAGGCTCAATGAATGTTACTGACC 1155
|||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||| |
Sbjct 938 ATTCTACATTTTATGTATGGTTGGACGTGGATTCACCTGGCTCAATGAAGGTTACTGATC 997
Query 1156 TGCCTCTGCTTCTCGTGGGATATGGTTTTGGTGCTTCGTTTGTTGCCTTATTTGCTCAGT 1215
||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 998 TGCCTCTTCTTCTTGTGGGATATGGTTTTGGTGCATCATTTGTTGCCTTATTTGCTCAGT 1057
Query 1216 TGGGTGGTGGAATATATACTAAGGGAGCTGATGTTGGGGCAGATCTCGTTGGGAAAGTTG 1275
|||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct 1058 TGGGTGGTGGAATATATACTAAGGGAGCTGATGTCGGGGCAGATCTGGTCGGGAAAGTTG 1117
Query 1276 AGCAGGGAATTCCCGAGGATGATCCTCGAAATCCTGCTGTTATTGCTGATTTGGTTGGAG 1335
|||| || ||||| |||||||| ||||| || ||||| ||||| ||||||||||||||||
Sbjct 1118 AGCACGGTATTCCTGAGGATGACCCTCGGAACCCTGCAGTTATAGCTGATTTGGTTGGAG 1177
Query 1336 ACAATGTGGGGGACTGTGCTGCTAGAGGTGCTGATTTATTTGAAAGTATAGCTGCAGAAA 1395
||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1178 ACAATGTTGGGGACTGCGCTGCTCGAGGTGCTGATTTATTTGAAAGTATAGCTGCAGAAA 1237
Query 1396 TCATCAGTGCAATGATACTAGGTGGAACAATGGCTAAGAAGTGCAAAATTGAAGATCCAT 1455
||||||||||||||||||| || || ||||||||| ||||||||||||||||||||||||
Sbjct 1238 TCATCAGTGCAATGATACTTGGGGGTACAATGGCTCAGAAGTGCAAAATTGAAGATCCAT 1297
Query 1456 CAGGCTTTATCCTT-TTTCCTCTAGTTGTTCATTCTTTTGACTTGATTATATCATCAATT 1514
| || ||||| || ||||||||||||||||| || ||||||||| | ||||||||||||
Sbjct 1298 CTGGTTTTATT-TTATTTCCTCTAGTTGTTCACTCGTTTGACTTGGTAATATCATCAATT 1356
Query 1515 GGTATTCTATCAATCAAGGGAACACGTGATGCCAGTGTGAAATCTCCGGTAGAGGATCCA 1574
||||||||||| ||||| ||||| || |||| |||||||||||||| ||||||||||||
Sbjct 1357 GGTATTCTATCGATCAAAGGAACTCGCAATGCTAGTGTGAAATCTCCAGTAGAGGATCCA 1416
Query 1575 ATGGCTGTACTTCAGAGAGGATATTCTCTGACTATTATATTAGCTGTTTTGACATTTGGC 1634
|||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1417 ATGGTTGTTCTTCAGAAAGGATATTCGCTGACTATTATATTAGCTGTTTTGACATTTGGC 1476
Query 1635 GCGTCGACTCGCTGGCTGCTTTACACTGAACAGGCTCCATCTGCATGGTTCAATTTCGCC 1694
|||||||||||||||||||| ||||| ||||| ||||||||||| ||||| |||||| |
Sbjct 1477 GCGTCGACTCGCTGGCTGCTATACACAGAACAAGCTCCATCTGCTTGGTTGAATTTCTTC 1536
Query 1695 CTATGTGGGTTGGTTGGCATCATCACAGCCTATATCTTTGTCTGGATATCCAAATATTAT 1754
| ||||| || |||||||| |||||||||||| |||||||||||||||||| |||||||
Sbjct 1537 ATGTGTGGCTTAGTTGGCATTATCACAGCCTATGTCTTTGTCTGGATATCCAGATATTAT 1596
Query 1755 ACAGACTATAAGCACGAGCCTGTTCGAACGTTGGCTCTTGCTAGCTCGACTGGTCATGGG 1814
|| ||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1597 ACTGACTATAAGTATGAGCCTGTTCGGACGTTGGCTCTTGCTAGCTCCACTGGTCATGGA 1656
Query 1815 ACTAATATCATTGCTGGGGTCAGCTTGGGCCTGGAATCAACTGCTCTTCCAGTTTTGACT 1874
|| ||||| |||||||||||||||||||| |||||||| || |||||||| |||||| |
Sbjct 1657 ACCAATATAATTGCTGGGGTCAGCTTGGGTCTGGAATCCACGGCTCTTCCTGTTTTGGTT 1716
Query 1875 ATAAGTGTAGCTATTATTTCTGCGTATTGGCTGGGCAATACCTCGGGACTAGTGGACGAA 1934
|||||||||||||| |||||||| | ||||||||||||||||||||||||| | || |||
Sbjct 1717 ATAAGTGTAGCTATCATTTCTGCTTTTTGGCTGGGCAATACCTCGGGACTAATAGATGAA 1776
Query 1935 AATGGCATTCCCACTGGAGGTCTATTTGGAACAGCCGTTGCTACAATGGGAATGCTAAGC 1994
|| || | |||||||||||||||||||||||||| || ||||||||||||||| | |||
Sbjct 1777 AAGGGAAACCCCACTGGAGGTCTATTTGGAACAGCTGTAGCTACAATGGGAATGTTGAGC 1836
Query 1995 ACTGCAGCTTATGTCCTTACTATGGACATGTTTGGCCCCATAGCTGACAACGCTGGTGGG 2054
|||||||||||||| ||||| |||||||||||||| ||||||||||| || || ||||||
Sbjct 1837 ACTGCAGCTTATGTTCTTACAATGGACATGTTTGGTCCCATAGCTGATAATGCAGGTGGG 1896
Query 2055 ATTGTCGAGATGAGCCAGCAGCCAGAAAGTGTCCGTGAGATCACTGATCTTCTTGATGCT 2114
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1897 ATTGTTGAGATGAGCCAGCAGCCAGAAAGTGTCCGTGAGATCACTGATGTTCTTGATGCT 1956
Query 2115 GTTGGGAACACCACAAAAGCAACAACGAAAGGGTTTGCCATTGGATCTGCTGCCCTTGCG 2174
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1957 GTTGGGAATACCACAAAAGCAACAACAAAAGGGTTTGCTATTGGATCTGCTGCCCTTGCA 2016
Query 2175 TCATTCCTTCTCTTTAGTGCGTATATGGACGAGGTTTCAGCGTTTGCTAATGTGTCTTTC 2234
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2017 TCATTCCTTCTTTTTAGTGCGTATATGGACGAGGTTTCAGCGTTTGCTAATGTATCTTTT 2076
Query 2235 AAAGAGGTTGATATTGCTATCCCAGAAGTGTTCGTAGGTGGGTTATTGGGTTCCATGCTT 2294
||||||||||||||||| ||||||||||| ||| | || |||||||| ||| ||||||||
Sbjct 2077 AAAGAGGTTGATATTGCGATCCCAGAAGTCTTCATTGGAGGGTTATTAGGTGCCATGCTT 2136
Query 2295 ATTTTCCTCTTTAGTGCTTGGGCATGTGCGGCAGTTGGTCGAACTGCACAAGAGGTTGTC 2354
|| ||||| ||||| |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct 2137 ATATTCCTGTTTAGCGCTTGGGCTTGTGCAGCAGTTGGTCGAACTGCACAGGAGGTTGTC 2196
Query 2355 AACGAAGTAAGAAGACAATTTATTGAGAGGCCTGGCATAATGGAGTACAAGGAGAAGCCA 2414
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct 2197 AACGAAGTAAGAAGACAGTTCATTGAGAGGCCTGGCATAATGGACTACAAGGAGAAGCCA 2256
Query 2415 GATTATAGTCGCTGTGTCGCCATTGTCGCATCTGCAGCTTTAAGGGAAATGATAAAGCCA 2474
|||||| |||| ||||||||||||||||||||| ||||||| |||||||||||||| |||
Sbjct 2257 GATTATGGTCGATGTGTCGCCATTGTCGCATCTTCAGCTTTGAGGGAAATGATAAAACCA 2316
Query 2475 GGAGCTTTAGCTATTGCATCACCCATTGTAGTTGGTTTGGTTTTTCGGATTTTGGGTTAC 2534
|||||||| ||||| ||||||||||| ||||||||| || || ||||| ||||| |||
Sbjct 2317 GGAGCTTTGGCTATAATATCACCCATTGCAGTTGGTTTTGTGTTCCGGATCTTGGGATAC 2376
Query 2535 TACACAGGACAACCTCTGCTCGGAGCAAAAGTTGTAGCTTCTATGCTCATGTTTGCAACA 2594
||||| ||||||||| |||| ||||| ||||| |||||| | ||||| |||||||| |||
Sbjct 2377 TACACTGGACAACCTTTGCTTGGAGCTAAAGTAGTAGCTGCAATGCTAATGTTTGCGACA 2436
Query 2595 GTTTGTGGTATCTTAATGGCACTTTTCCTAAACACGGCGGGAGGTGCTTGGGACAATGCA 2654
|| ||||||||||||||||| || ||| |||| || || |||||||||||||||||||||
Sbjct 2437 GTATGTGGTATCTTAATGGCTCTATTCTTAAATACAGCAGGAGGTGCTTGGGACAATGCA 2496
Query 2655 AAGAAATACATAGAGACTGGGGCACTTGGGGGGAAAGGAAGTGAAGCCCACAAAGCAGCT 2714
||||||||||| |||||||| || || || || ||||||||||| |||||||||| ||
Sbjct 2497 AAGAAATACATTGAGACTGGAGCTCTAGGAGGCAAAGGAAGTGATTCCCACAAAGCTGCA 2556
Query 2715 GTGACTGGTGATACCGTGGGAGATCCGTTCAAGGACACAGCCGGTCCATCCATTCACGTC 2774
|| ||||||||||| |||||||| || |||||||||||||| || || || ||||||||
Sbjct 2557 GTAACTGGTGATACTGTGGGAGACCCTTTCAAGGACACAGCAGGACCGTCGATTCACGTT 2616
Query 2775 CTCATAAAAATGCTCGCGACTATAACTCTCGTCATGGCTCCGGT-TTTCCTCTGAAA 2830
||||| |||||| | |||||||| || || ||||||||||| | |||| |||||||
Sbjct 2617 CTCATCAAAATGTTGGCGACTATCACGCTTGTCATGGCTCCTATCTTTC-TCTGAAA 2672
> AT1G78922.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT1G21722.1);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source:
NCBI BLink). | chr1:29676755-29677815 REVERSE LENGTH=863
Length=863
Score = 531 bits (287), Expect = 2e-149
Identities = 343/371 (92%), Gaps = 0/371 (0%)
Strand=Plus/Minus
Query 2897 AGACAATTGTCTACTCGATAGTCTAATGAGGCGGCGGTTGTTGCGATTGCTGCCTTGATG 2956
||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||
Sbjct 570 AGACAATTGTCTACTCGGTAGTCTTATGAGACGGCGGTTGTTGCGATTGCTGCCATGATG 511
Query 2957 GTGGTGGTTGTGTTTGCTTCCTAATCTTCTTCTTCTCTGCTTTGGTCTAATGTTGTTTAT 3016
||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||
Sbjct 510 GTGGTGGCTGTGTTTGCTTCCTAGTCTTCTTCTTCTCTGCTTTGGTCTAATGTTATCTAT 451
Query 3017 TCGACTGGGACTGTTCGATGAACTTGATTCGCCATCACTTGGGTAATCATACATCGTAGC 3076
|||||||||||||| ||||||||||||||| ||||||| || |||||||| |||||||
Sbjct 450 TCGACTGGGACTGTCCGATGAACTTGATTCATCATCACTCGGATAATCATAGGTCGTAGC 391
Query 3077 TTCTATATCACCGAGACGTTTTCTGCGATGGCGGACCCGTTTTATGTTAGTCAAACTGTG 3136
|||||||||| ||||||||||||||||| || |||||| ||||||||||||||||||||
Sbjct 390 TTCTATATCATCGAGACGTTTTCTGCGACGGTTGACCCGATTTATGTTAGTCAAACTGTG 331
Query 3137 CCACAAGCAACTAACCATCTCTCCAATGGCGAAGCAGTACGCTGCACAAGCGGCACATGA 3196
||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 330 ACACAAGCAACTAATCATCTCTCCAATGTCGAACCAGTACGCTGCACAAGCGGCACATGA 271
Query 3197 CATTTTGCAGATGCTTTTAACAACGCACTGGCAAATTCCAAGCTTGAACAGGAGGGTGAT 3256
|||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct 270 CATTTTGCAGATACTTTTCACAACACATTGGCAAATTCCAAGCTTGAACAGGAGGGTGAT 211
Query 3257 GAACATcaaaa 3267
|||||||||||
Sbjct 210 GAACATCAAAA 200
Score = 137 bits (74), Expect = 6e-31
Identities = 76/77 (99%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 2822 CCTCTGAAAGTGAACCGTTACTTATCCATCCCGGCTTATATACTCTCTTGCACATATACA 2881
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 863 CCTCTGAAAGTGAACCGTTACTTATCCATCCCGGCTTATTTACTCTCTTGCACATATACA 804
Query 2882 AATAGAGAGGGAGAGAG 2898
|||||||||||||||||
Sbjct 803 AATAGAGAGGGAGAGAG 787
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 168861930138
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5