BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477071
Length=1611
Score E
Sequences producing significant alignments: (Bits) Value
AT1G79020.1 | Symbols: | Enhancer of polycomb-like transcripti... 2263 0.0
AT1G16690.1 | Symbols: | Enhancer of polycomb-like transcripti... 968 0.0
> AT1G79020.1 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr1:29727123-29730431 REVERSE LENGTH=1893
Length=1893
Score = 2263 bits (1225), Expect = 0.0
Identities = 1409/1495 (94%), Gaps = 23/1495 (2%)
Strand=Plus/Plus
Query 136 CACACTTGTAAGTAGAATAGTGAGGAAGAAGGTGATATGAGTAGGCTCTCTTTCCGGCCA 195
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 337 CACACTTGTAAGTAGAATAGTGAGGAAGAAGGTAATATGAGTAGGCTCTCTTTCCGGCCA 396
Query 196 CGGCCATTGGACATTCATAAGAAGCTTCCCATTTTAAAATCGTTTAAAGACTTTGAAGAC 255
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 397 CGGCCATTAGACATTCATAAGAAGCTTCCCATTTTAAAATCCTTTAAAGACTTTGAAGAT 456
Query 256 GATGAGACACCAACTTCTACCACTAGAAATTCTCAGTTGCTTCGTATAGCTTCCGTCGAG 315
|||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct 457 GATGAGACTCCAACTTCTACCACTAGAAATTCTCAGTTGCTGCGTATTGCTTCCGTAGAA 516
Query 316 GTTGACAATGAGGTGGCTCCAGTGCCAAGCAAGAAACCGGCTTCAGAAATACCAACACCT 375
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 517 GTTGACAATGAGGTGGCTCCAGTGCCAAGTAAGAAACCGGCTTCAGAAATACCAACACCT 576
Query 376 CAATTTGTTATTGTGGATACATATGAAAGGGATTATTCTCCTACTTTTGGTCAGCCTGCT 435
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 577 CAATTTGTTATTGTGGATACATATGAAAGGGATTATTCTCCGACTTTTGGTCAGCCTGCT 636
Query 436 TCTTATCTACGAGCAAGAGGAGCTCGGTCTGAGCTTGGAGAATTTGTGGAGTATGATCTT 495
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 637 TCTTATCTACGTGCAAGAGGAGCTCGGTCTGAGCTTGGAGAATTTGTGGAGTATGATCTT 696
Query 496 GACAATGAGGATGAAGACTGGCTTTATGAGTTTGATAAGGATAAGAAAGAACTTCCACCT 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 GACAATGAGGATGAAGACTGGCTTTATGAGTTTGATAAGGATAAGAAAGAACTTCCACCT 756
Query 556 GAAAAGCTTGAGAGCGTTATTTTTAAACTAGAGGTGTTGGATCACAAGACGCGGGAAAGA 615
||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 757 GAAAAGCTTGAGATCATCATTTTTAAACTAGAGGTGTTGGATCACAAGACGCGGGAAAGA 816
Query 616 GCTGGAGTTATTACACCTACTCTCGGTTCTCCGGTTCCTGTGCTTTTGCAGTTTGATGCT 675
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 817 GCAGGAGTTATTACACCTACTCTCGGCTCTCCAGTTCCTGTGCTTTTGCAGTTTGATGCT 876
Query 676 GCTGCTGCTGCACTGCATTTACTGTCCATTAATTATGGAATCTTCCAGGCGATCTTCAAC 735
||| ||| || ||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 877 GCTTCTGATGTGCTGCAAGTACTGTCCATTAATTATGGAACCTTCCAGGCGATCTTCAAC 936
Query 736 TACTGGAAAGAAAAGCGCAAAAGATGGCAGAAGCCTATCTTGCGGCGCTTACAGCCTCCC 795
||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 937 TACTGGAAAGAAAAGCGTAAAAGATGGCAGAAGCCTATCTTACGGCGTTTACAGCCTCCC 996
Query 796 CCACCGGTTAATGACACCAATCCCTATAATGTGTTTAGGCCAAGGGAGAAAGTTCACAGA 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 997 CCACCGGTTAATGACACCAATCCCTATAATGTGTTTAGGCCAAGGGAGAAAGTTCACAGA 1056
Query 856 CTCCACACAAGAAGGATGCAGAGGAGAGAAAACAATGTGCAGTCATTTGAAAAGCTTCGA 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1057 CTCCACACAAGAAGGATGCAGAGGAGAGAAAACAATGTGCAGTCATTTGAAAAGCTTCGA 1116
Query 916 CAGGTTAGACGCAACCTAGGGCAAGCACAGACCATTCTGGAGGCTCTCATTaagagagaa 975
|||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 1117 CAGGTTAGACGCAATCTAGGCCAAGCACAGAGCATTCTGGAGGCTCTCATTAAGAGAGAA 1176
Query 976 gagaagaagagGGATGTCATGGACAGTGAGGTTAGCCTCCAGAGAATCCAACTCCAATAC 1035
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1177 GAGAAGAAGAGGGATGTCATGGACAGTGAGGTTAGCCTTCAGAGAATCCAACTCCAATAC 1236
Query 1036 AGGCATGAAACAGAGCTCTTGGAAGATAGCTTGGCTCTGCCTGGATTTCCACCCACTACA 1095
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 1237 AGGCATGAAACAGAGCTCTTGGAAGATAGCTTGGCTATGCCTGGATTTCAACCCACTACA 1296
Query 1096 ACATCATACAAATTTGGCTCAAGCGATGATGAACTGATGGACTCAGATGATCACACAAGT 1155
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1297 ACATCATACAAATTTGGCTCAAGCGATGATGAACTGATGGACTCTGATGATCACACCAGT 1356
Query 1156 ACCCGTGTACGCACAAGACCTGCCGTTATCCCTAATTCTCGTTTCACCAACTTAAATCTG 1215
|| |||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||
Sbjct 1357 ACTCGTGTACGTACAAGACCTGCGGTTATTCCTAGTTCTCGTTTCACCAACTTAAATCTG 1416
Query 1216 AATGCATCTCAACCCGGAGGCATCAAACAAGAAGTTAGAAGACGACAGTCGCAGCACGGA 1275
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1417 AATGCATCTCATCCCGGAGGCATCAAACAAGAAGTTAGAAGACGACAGTCACAGCATGGA 1476
Query 1276 TGGCTTCACAGACTGGATCCTAATGAACCAGTCATGCTGTTTACAAAACCGCTGGTTCCC 1335
||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||
Sbjct 1477 TGGCTTCACAGACTGGATCCTAATGAACCGGTAATGCTATTCACAAAACCGCTGGTTCCC 1536
Query 1336 GATAAACTGGCAGCTGCAGGGATTGTTCCTCCAGCACCGGATTCATC----G--C--C-- 1385
||||||||||||||||||||||||||||||||| ||||||||||||| | | |
Sbjct 1537 GATAAACTGGCAGCTGCAGGGATTGTTCCTCCAACACCGGATTCATCACCAGGTCAACCT 1596
Query 1386 --AAGTCGGTTTCAGGGGAGGATTGGGCGTGGTGGCCGAATAATATTCGATAGATGGAAT 1443
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1597 CCAAGTCGGTTTCAGGGGAGGATTGGGCGTGGTGGCCGAATTATTTTCGATAGATGGAAT 1656
Query 1444 CCTTTGATGCAATCTCACATTAACTGCGGAAACTCTTATTACATTGCGCCAAATCACCGA 1503
|| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct 1657 CCGTTGATGCAATCTCACATTAATTGTGGAAACTCTTATTACATTGCTCCAAATCACCGG 1716
Query 1504 TCTACCAACTTCAATTGAGATATTT-CACAAATCTTTG-TTTGTAAAGAATTTGCGAA-A 1560
|||||||||||| |||||||||||| ||||| |||| | |||||||||||||| | | |
Sbjct 1717 TCTACCAACTTCGATTGAGATATTTTCACAA-TCTT-GCTTTGTAAAGAATTTTCCATCA 1774
Query 1561 --AA-G-TGAATGCAATAACGATTCTCTGCTaaaaaaaaGTTTTAGCACTTTGTA 1611
|| | || ||||||||||||||||| |||||| || ||||||||||||||||
Sbjct 1775 CCAATGGTGTATGCAATAACGATTCTCAGCTAAATAA--GTTTTAGCACTTTGTA 1827
Score = 141 bits (76), Expect = 2e-32
Identities = 102/114 (89%), Gaps = 4/114 (4%)
Strand=Plus/Plus
Query 1 AAAAACCCTAACCCTAAAATTCGTGGTCGATTGCTTTACTGTTCTCTCTGTTTTGTTTTC 60
||||||||||||||||||||||||| |||||| ||| | ||| ||||||||||||||||
Sbjct 139 AAAAACCCTAACCCTAAAATTCGTGTTCGATTAATTT-C-GTTGTCTCTGTTTTGTTTTC 196
Query 61 TCTTCGTGTAAACGttttttt--CGAGTTTTGGGATTCTGAGTTATTTGAGtat 112
||||||||||||| ||||||| |||||||||| | |||||| |||||||||||
Sbjct 197 TCTTCGTGTAAACCTTTTTTTTTCGAGTTTTGGCACTCTGAGCTATTTGAGTAT 250
> AT1G16690.1 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr1:5705969-5709533 FORWARD LENGTH=1848
Length=1848
Score = 968 bits (524), Expect = 0.0
Identities = 1094/1363 (80%), Gaps = 64/1363 (5%)
Strand=Plus/Plus
Query 146 AGTAGAATAGTGAGGAAGA-AGGTGATATGAGTAGGCTCTCTTTCCGGCCACGGCCATTG 204
||||| | || |||||||| | |||| ||||||||||| ||||| || || || ||| ||
Sbjct 343 AGTAG-AGAG-GAGGAAGATA-GTGAAATGAGTAGGCTATCTTTTCGACCCCGTCCACTG 399
Query 205 GACATTCATAAGAAGCTTCCCATTTTAAAATCGTTTAAAGACTTTGAAGACGATGAGACA 264
||||| || ||||||||||| |||||||| || |||||||||||||||||||| || | |
Sbjct 400 GACATACACAAGAAGCTTCCAATTTTAAAGTCTTTTAAAGACTTTGAAGACGAAGATA-A 458
Query 265 -CCAACTTCTACCACTAGAAATTCTCAGTTGCTTCGTATAGCTTCCGTCGA-G--GTTGA 320
|| |||| | |||||||| ||||||||||| |||||| || |||| || | |||||
Sbjct 459 TCCTTCTTCCATTACTAGAAACTCTCAGTTGCTGCGTATATCTGCCGTAGAGGTTGTTGA 518
Query 321 CAATGAGGTG--G-CTCCAGTGCCAAGCAAGAAACCGGCTTCAGAAATACCAACACCTCA 377
|||||||||| | |||||||||| || ||||||| | ||| ||||| |||||||||||
Sbjct 519 CAATGAGGTGCAGCCTCCAGTGCCTAGTAAGAAACTGATTTCGGAAATCCCAACACCTCA 578
Query 378 ATTTGTTATTGTGGATACATATGAAAGGGATTATTCTCCTACTTTTGGTCAGCCTGCTTC 437
| | || |||| |||||||||||||| || || ||| |||||| ||||||||||||
Sbjct 579 GTATCTTGTTGTTGATACATATGAAAGAGACTACTCTAGGACTTTTAATCAGCCTGCTTC 638
Query 438 TTATCTACGAGCAAGAGGAGCTCGGTCTGAGCTTGGAGAATTTGTGGAGTATGATCTTGA 497
||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 639 ATATTTACGCGCTAGAGGAGCTCGGGCTGAGCTTGGAGAATTTGTGGAGTATGATCTTGA 698
Query 498 CAATGAGGATGAAGACTGGCTTTATGAGTTTGATAAGGATAAGAAAGAA-CT-TCCACCT 555
|||||| ||||| |||||||||||||||| | ||||||| | || || || || ||||
Sbjct 699 CAATGACGATGATGACTGGCTTTATGAGTATAATAAGGAGAC-AATGATTCTCTC-ACCT 756
Query 556 GAAAAGCTTGAGAGCGTTATTTTTAAACTAGAGGTGTTGGATCACAAGACGCGGGAAAGA 615
|||| |||||||| |||||| |||||||||||||| |||||||| ||| |||||||||||
Sbjct 757 GAAATGCTTGAGATCGTTATATTTAAACTAGAGGTCTTGGATCATAAGGCGCGGGAAAGA 816
Query 616 GCTGGAGTTATTACACCTACTCTCGGTTCT-CCGGTTCCTGTGCTTTTGCAGTTTGATGC 674
|||||||||||||| ||||| || |||| | || ||||| |||||||||||| ||||||
Sbjct 817 GCTGGAGTTATTACTCCTACCCTTGGTT-TGCCAGTTCCAGTGCTTTTGCAGCCTGATGC 875
Query 675 TGCTGCTGCTGCACTGCATTTACT-GTCCATTAATTATGGAATCTTCCAGGCGATCTTCA 733
||||| || || ||| | | | | |||||| || |||||| | ||||| || || | ||
Sbjct 876 TGCTGGTGAGGCGCTGAAAT-ATTTGTCCATCAAATATGGAGTTTTCCACGCTATATACA 934
Query 734 ACTACTGGAAAGAA-AAGCGCAAAAGATGGCAGAAGCCTATCTTGCGGCGCTTACAGCCT 792
|| |||||| || ||||| ||| |||||||||||||||||||||||| |||||||||
Sbjct 935 GTTATTGGAAA-AATAAGCGTGAAATATGGCAGAAGCCTATCTTGCGGCGTTTACAGCCT 993
Query 793 CCCCCACCGGTTAATGACACCAATCCCTATAATGTGTTTAGGCCAAGGGAGAAAGTTCAC 852
|| |||||||| ||||| |||||||| || ||||||||||||||| ||||||||| |||
Sbjct 994 CCACCACCGGTCAATGATACCAATCCGTACAATGTGTTTAGGCCACGGGAGAAAGCTCAT 1053
Query 853 AGACTCCACACAAGAAGGATGCAG-AGGAGAGAAAACAATGTGCAGTCATTTGAAAAGCT 911
||||| ||| ||||||| |||||| || ||||||||||||| |||||||||||| |||||
Sbjct 1054 AGACTACACGCAAGAAGAATGCAGCAG-AGAGAAAACAATGCGCAGTCATTTGAGAAGCT 1112
Query 912 TCGACAGGTTAGACGCAACCTAGGGCAAGCACAGACCATTCTGGAGGCTCTCATTaagag 971
|||||||| || ||||| || | |||||| |||||||||| || ||||| ||||||||
Sbjct 1113 GCGACAGGTCAGGCGCAATCTTGACCAAGCAAAGACCATTCTAGAAGCTCTTATTAAGAG 1172
Query 972 agaagagaagaagagGGATGTCATGGAC-AGTGAGGTTAGCCTCCAGAGAATCCAACTCC 1030
||||||||| ||||||||| |||||| | |||||||||||||| ||||||||||||||
Sbjct 1173 AGAAGAGAAAAAGAGGGATTTCATGG-CGAGTGAGGTTAGCCTTCAGAGAATCCAACTGA 1231
Query 1031 AATACAGGCATGAAACAGAGCTCTTGGAAGATAGCTTGGCTCTGCCTGGATTTCCACCCA 1090
|||| | | ||||||| || || ||||||||||| ||||||||| |||| ||||||| |
Sbjct 1232 AATATAAGAATGAAACCGAACTTTTGGAAGATAGTTTGGCTCTGGCTGGGTTTCCACTCT 1291
Query 1091 CTACAACATCATACAAATTTGGCTCAAGCGATGATGAACTGATGGACTCAGATGATCAC- 1149
||||| | | |||| ||||||||||||||| |||||| | |||||||| ||||| | |
Sbjct 1292 CTACAGC-T--TACAGATTTGGCTCAAGCGAAGATGAATTCATGGACTCCGATGACC-CG 1347
Query 1150 ACAAGTACCCGTGTACGCACAAGACCTGCCGTTATCCCTAATTC-TCGTTTCACCAACTT 1208
|| | |||| | | ||||| ||| || ||| |||| || | |||||||||| |||
Sbjct 1348 ACCACCACCCAAACATGTACAAGGCCTTCCTTTACCCCTCAT-CGTCGTTTCACCGACTC 1406
Query 1209 AAATCT-GAAT-GCATCTCAACCCGG-AGGCATCAAA-CAAGAAGTTAGAAGACGACAGT 1264
||| || | | | | ||||| |||| || ||| ||| ||||| | | || || ||
Sbjct 1407 AAACCTCGC-TCG-AGCTCAAGCCGGGAG-CAT-AAAGCAAGA-G---GC-GA-GA-AG- 1454
Query 1265 CGCAGCACGGATGGCTTCACAGACTGGATCCTAATGAACCAGTCATGCTGTTTACAAAAC 1324
| | |||||||| |||| |||| |||||||||| ||||| |||||||| || |||
Sbjct 1455 ---A-CTTGGATGGCTCCACAAACTGAATCCTAATGAGCCAGTTATGCTGTTCACGAAAG 1510
Query 1325 CGCTGGTTCCCGATAAACTGGCAGCTGCAGGGATTGTTCC-TCCAGCACCGG-ATTCA-T 1381
| |||| |||||||||||||| ||||| |||| | ||| |||| || | | | |
Sbjct 1511 CATTGGTCCCCGATAAACTGGCTGCTGC-GGGAATCATCCCTCCATCAGATGCAAGAAGT 1569
Query 1382 CGCCA-AG-TCGGTTTCAGGGGAGGATTGGGC-GTGGTGGCCGAATAATATTCGATAGAT 1438
| | || ||||||||| || || || ||| | || || || || |||| |||||||
Sbjct 1570 GGA-AGAGCTCGGTTTCAAGGAAGAAT-GGGTAGAGGCGGTCGGATTGTATTTGATAGAT 1627
Query 1439 GGAATCCTTTGATGCAATCTCACATTAACTGCGG-AA-ACTCT 1479
|||||||| | | ||| | ||||||||||| || || |||||
Sbjct 1628 GGAATCCTCTAAACCAAGCCCACATTAACTGTGGCAACACTCT 1670
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79567863825
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5