BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477087
Length=3847
Score E
Sequences producing significant alignments: (Bits) Value
AT1G79190.1 | Symbols: | ARM repeat superfamily protein | chr1... 3400 0.0
> AT1G79190.1 | Symbols: | ARM repeat superfamily protein | chr1:29788639-29794175
FORWARD LENGTH=4067
Length=4067
Score = 3400 bits (1841), Expect = 0.0
Identities = 2046/2147 (95%), Gaps = 5/2147 (0%)
Strand=Plus/Plus
Query 1705 AAGCTCTACGAGATGCTCGCTGGAATCCTTAGACTTGTAGGCTTATCCTTAATGGCAGGA 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1888 AAGCTCTACGAGATGCTCGCTGGAATCCTTAGACTTGTAGGCTTATCCTTAATGGCAGGA 1947
Query 1765 TTTAAAAACGAAGGGCATTTAGCAGTCATCCTGGATATTCCTTTGGGGGTTGTCCGTAAA 1824
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1948 TTTAAAAACGAAGGGCATTTAGCAGTCATCCTGGATATTCCTCTGGGGTTTGTCCGTAAA 2007
Query 1825 TTGGTTTCAGAAGTTCGTGTAAAGGAGTATAACGGAGAAGACTGGCAGTTGTGGTGTAAT 1884
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 2008 TTGGTTTCAGAAGTTCGTGTAAAGGAGTATAATGGAGAAGACTGGCAGTCGTGGTGTAAT 2067
Query 1885 CGAACTGGTTCAGGACAATTAGTTCGCCAGGCGGCAACTGCTGCTTGTATCTTGAATGAG 1944
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2068 CGAACTGGTTCAGGACAGTTAGTTCGCCAGGCGGCAACTGCTGCTTGTATCTTGAATGAG 2127
Query 1945 ATGATCTTTGGTCTATCGGATCAAGCAATGGATGCTCTCTCAAGACTGCTTCGGAAGTCA 2004
||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct 2128 ATGATCTTTGGTCTATCTGATCAAGCAACGGATGCTCTCTCAAGACTGCTTCAGAAGTCA 2187
Query 2005 AGAAAGGGGAGAGACAAACTTTCCTGGGAAATCTCATGGAACAAACGTGCAAAAACAAAT 2064
|| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2188 AGGAAGGGAAGAGACAAACTTTCCTGGGAAATCTCTTGGAACAAACGTGCAAAAACAAAT 2247
Query 2065 CTGATTGATTGCGTTGGTAAGATCCTGCATGAATACCAATCTTCTGAAGTTTGGGATCTC 2124
|||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 2248 CTGATTGAGTGCGTTGGTAAAATCCTGCATGAATACCAAGCTTCTGAAGTTTGGGATCTC 2307
Query 2125 CCCGTGGACCAAAAGACAATTCTGGGCCAAACCGATACCAATGTGCAACATATTAGTCTG 2184
||||||||||||||| |||||||||||||||| |||| | ||| ||||||||||||||||
Sbjct 2308 CCCGTGGACCAAAAGGCAATTCTGGGCCAAACTGATAACGATGGGCAACATATTAGTCTG 2367
Query 2185 CATTTCTTAAGAGATAGTGCAATGCTACACCAAGTTATAATAGAAGGAATAGGTGTGTTT 2244
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2368 CATTTCTTAAGAGACAGTGCAATGCTACACCAAGTTATAATAGAAGGAGTAGGTGTGTTT 2427
Query 2245 TCCTTGTGTCTAGGGAACGACTTTGCTTCAAGTGGATTTCTTCACTCTTCGCTTTACCTT 2304
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2428 TCCTTGTGTCTAGGGAAAGACTTTGCTTCAAGTGGATTTCTTCACTCTTCGCTTTACCTT 2487
Query 2305 CTGCTTGAGAGTCTTACCTGCTCGAGCTTCCAAGTTAGAAATGCTGCAGATGCTGTCCTA 2364
|||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||
Sbjct 2488 CTGCTTGAGAGTCTTACCTGCTCGAGTTTCCAAGTTAGAAATGCTTCAGACACTGTCCTA 2547
Query 2365 CGTCTTCTTGCTTCCACCTCAGGCCACCCCACAGTTGGGCATCTGGTCGTTGCAAATGCG 2424
|||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 2548 CGTCTTCTTGCTGCCACCTCAGGCCATCCCACAGTTGGGCATCTGGTTGTTGCAAATGCG 2607
Query 2425 GATTATGTTATTGACTCTATTTGTCGCCAGCTGCGCCACCTGGATCTTAATTCTCATGTC 2484
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2608 GATTATGTTATTGACTCTATTTGTCGCCAGCTGCGCCACCTGGATCTTAATCCTCATGTC 2667
Query 2485 CCAAATGTTCTAGCTGCTATGCTTTCTTATATCGGGGTTGCCCATGATATATTGCCTTTG 2544
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2668 CCAAATGTTCTAGCTGCTATGCTTTCTTATATCGGGGTTGCCCATGATATATTACCTTTG 2727
Query 2545 TTGGAGGAACCGATGCGATTGGTTTCTCAGGAACTTGAAATCGTTGGTAGACAACAGCAT 2604
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 2728 TTGGAGGAACCGATGCGATTGGTTTCCCAGGAACTTGAAATTGTTGGTAGACAACAGCAT 2787
Query 2605 CCAAATCTAACTTTACCCTTCTTGAAGGCTGTTGGTGAGATTGTAAATGCATCAAAGAAC 2664
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2788 CCAAATCTAACTATACCCTTCTTGAAGGCTGTTGGTGAGATTGTAAATGCATCAAAGAAC 2847
Query 2665 GAGGCTTGCTTATTACCAGAACGAGCCAAGTCATATAGTGACCATGTTAAGGCCAAAGCA 2724
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 2848 GAGGCTTGCTTATTACCAGACCGAGCCAAGTCATATAGTGACCATGTTAAGACCAAAGCA 2907
Query 2725 ACTGATGCGATAACATCAAGGCAAGAGAGAGGTTCAGATTCTAACAAAATAGTTGACGAC 2784
||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||||| |||
Sbjct 2908 ACTGATGCGATTACATCAAGACAAGAGAGAGTTTCAAATTCTGACAAAATAGTTGAAGAC 2967
Query 2785 GAAGAAGAATGGGAAAACACACTGCTTGAATTGAATCGTTCTAAACGATACAGACGCACA 2844
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 2968 GAAGAAGAATGGGAAAACATACTGCTTGAACTGAATCGTTCTAAACGATACAGACGCACA 3027
Query 2845 GTTGGATCAATCGCCTCTTCTTGTTTAATAGCGGCCACGCCTCTCCTAGTATCATCAAAT 2904
||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 3028 GTTGGTTCGATCGCCTCTTCTTGTTTAATAGCGGCCACGCCTCTCCTTGCATCATCAAAT 3087
Query 2905 CAAGTCTCCTGCTTAGTTTCCCTTGATATAATTGAGGAAGGAGTAGTGGCACTGGCTAAA 2964
|||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 3088 CAAGTCTCATGCTTAGTTTCCCTCGAAATAATTGAGGAAGGAGTAGTGGCGCTGGCTAAA 3147
Query 2965 GTCGAGGAAGCTTATCGAGCTGAGACAGAAACCAAAGAAACAATTGAAGAAGTCATTGAA 3024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3148 GTCGAGGAAGCTTATCGAGCTGAGACAGAAACCAAAGAAACAATTGAAGAAGTCATTGAA 3207
Query 3025 TATGCTTCACTCTATCAGCTTAAAGACTACATGAATGCTAGTGACGATGGAGCAGACGAA 3084
| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 3208 TTTGCTTCATTCTATCAGCTTAAAGACTACATGAATGCTAGCGACGATGGAGCAGATGAA 3267
Query 3085 AACCGGCTTTTACCCGCTATCAACAAAATCTGGCCATTCTGTGTTGCTTGCATACGAAAC 3144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3268 AACCGGCTTTTACCCGCTATCAACAAAATCTGGCCATTCTGTGTTGCTTGCATACGAAAC 3327
Query 3145 AGAAATCCCGTGGCTGTGCGGAGATGCTTAGTCGCGATAACCCGAATCATTCAAACATCC 3204
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 3328 AGAAATCCCGTGGCTGTACGGAGATGCTTAGTCGTGATAACCCGAATCATTCAAACATCC 3387
Query 3205 GGAGGAGATTTCTTCTCACGCCGTTTCCGCAACGATGGCCCGGACTTCTGGAAGCTTTTG 3264
|||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||
Sbjct 3388 GGAGGAGATTTCTTCTCACGTCGTTTCCGCAATGATGGCCCAGACTTTTGGAAGCTTTTA 3447
Query 3265 ACAACGTCTCCATTCCACATTATGACGCCGAAGAACCTCCGGGAAGACAACAAATCGGCT 3324
||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
Sbjct 3448 ACAACGTCTCCATTCCACATTATGACGCCTAAGATCCTCCGGGAAGACAACAAATCGGTT 3507
Query 3325 CTCCGGCTTCCTTACAGAGCCATTTCCGAGTCATCTTCTTC---GATTGCTGAAGTTTCC 3381
||||| |||||||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct 3508 CTCCGACTTCCTTACAGAACCATTTCCGAGTCATCATCTTCTACGATTGCTGAAGTTTCC 3567
Query 3382 AGCTTGAAAGTGCAGGCTGCACTTCTCGATATGATCGCTGAGCTTTCCAGAGATAAACGC 3441
||||||||||||||||| ||| |||||||||||||||| ||| ||||||||| |||||||
Sbjct 3568 AGCTTGAAAGTGCAGGCAGCAGTTCTCGATATGATCGCCGAGATTTCCAGAGGTAAACGC 3627
Query 3442 AGTGCTTCAGCGTTAGATGCAGTCTTGAAGAAAGTTGCAGGATTGGTCGTTGGGATTGCG 3501
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 3628 AGTGCTTCAGCGTTAGATGCAGTCTTGAAAAAAGTTGCAGGATTGGTCGTGGGGATTGCG 3687
Query 3502 TGCAGCAGCGTAACTGGTTTAAGAGAATCGGCTTTGAATGCGTTGAGAGGA-TTGGCTTG 3560
| |||||| |||||||| |||||||| ||||||||||||||||||||||| ||| ||||
Sbjct 3688 TACAGCAGTGTAACTGGCCTAAGAGAAGCGGCTTTGAATGCGTTGAGAGGACTTG-CTTG 3746
Query 3561 CATTGATCCTGATCTCATTTGGATCCTCTTAGCTGATGTGTATTATTCTCTCAAGAAGAA 3620
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 3747 CATTGATCCTGATCTCATTTGGATTCTCTTAGCTGATGTGTACTATTCTCTCAAGAAGAA 3806
Query 3621 AGATTTGCCTCTTCCACCGTCTCCGGGGTTTCCAGATATCTCTAGGGTTTTGCCTTCACG 3680
|||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct 3807 AGATTTGCCTCTCCCACCGTCTCCGGAGTTTCCAGATATCTCTAATGTTTTGCCTTCTCG 3866
Query 3681 GCCGGCAGAAGATTCTCGGACAAGGTTTCTCTACGTAGAGTACGGTGGTCGAAGCTATGG 3740
|||| ||||||||||||| |||| ||||||||| ||||| ||||||||||| ||||||||
Sbjct 3867 GCCGCCAGAAGATTCTCGTACAAAGTTTCTCTATGTAGAATACGGTGGTCGGAGCTATGG 3926
Query 3741 TTTTGAGTTGGAGTTTAGCTCCGTTGAGATAATCTTTAAGAAAATGCAGTCTCTTGTCTT 3800
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3927 TTTTGAGTTGGAGTTTAGCTCCGTTGAGATAGTCTTTAAGAAAATGCAGTCTCTTGTCTT 3986
Query 3801 TGTAGACCAAATGCATTGTTAATACTTTGCTTGTAGTAAATACTTTT 3847
|||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3987 TGTAGACCAAATGCGTTGTTAATACTTTGCTTGTAGTAAATACTTTT 4033
Score = 2459 bits (1331), Expect = 0.0
Identities = 1483/1556 (95%), Gaps = 12/1556 (1%)
Strand=Plus/Plus
Query 1 ATGGAAAAGTCCGTCGTAATCCGCCATGAAACCAGTGGAGACGACGTTGAGGGAGAAGCG 60
||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||| ||
Sbjct 1 ATGGACAAGTCCGTCGTAATACGCCGTGAAACCAATGGAGACGACGTTGAGGGAGACCCG 60
Query 61 GAAAGAGAAGCCGTCTTTGCACAGA-TGAAAGTTCTCTGCTTGGAGCTTCTAAACCTATC 119
||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||| ||
Sbjct 61 GAAAGAGAAGCTGTCTTCGCACA-ACTGAAAGTTCTCTGCTTGGAGCTTCTAAACCTTTC 119
Query 120 GCAAAACCCTGAAAAGGATCCGGCCACCATCCCTGCTTTGCTTCATCTCCTCCGCCGTAC 179
||||||||||||||||||||| |||| |||||||||||||| | |||||||||||||||
Sbjct 120 GCAAAACCCTGAAAAGGATCCAACCACGATCCCTGCTTTGCTCCTTCTCCTCCGCCGTAC 179
Query 180 TCCTCCGTCCTCTCTCCAGTCTTTCTTCCACTACACTTTGTTCCCATTGCTTCTTTTGTT 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 180 TCCTCCGTCCTCTCTCCAGTCCTTCTTCCACTACACTTTGTTCCCATTGCTTCTTCTGTT 239
Query 240 AGACGCCGCAGTTGCTTGCAGAAGTCAGGGG-AATAATC-ACCCTGATGAATTTCCAAAA 297
||||||||||||||||||||||||||||||| || || | | || || ||||||||| ||
Sbjct 240 AGACGCCGCAGTTGCTTGCAGAAGTCAGGGGCAA-AA-CAAGCCAGAGGAATTTCCACAA 297
Query 298 ACACC-TCATAGAGTGAGTGATAAAGTGGCAGAAGGTGTAATCTCTTGTCTCGAGGAACT 356
||||| | ||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 298 ACACCAT-ATAGAGTGAGTGATAAAGTAGCAGAAGGTGTAATCTCTTGTCTCGAAGAACT 356
Query 357 TCTAAAGAAATGTCACATTGGATCCATAGATCAGATGGTTGTAATTATGAAGAAGTTAAC 416
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 357 TCTAAAAAAATGTCACATTGGATCCATAGATCAGATGGTTGTAATTATGAAGAAGTTAAC 416
Query 417 TAGTGCTGCTATTTTATCACCATCCAAGGCTGCTGAAGAGTTTCGTGAAGGGATCA-TCA 475
||||| |||| ||||||||||||| ||||| |||||||||||||||||||||| | |||
Sbjct 417 TAGTGGTGCTGTTTTATCACCATCTGAGGCTTCTGAAGAGTTTCGTGAAGGGAT-AGTCA 475
Query 476 AATGTTTCCGGGCAATGATTTCTGGTCTGCTTCCATGCTTTGATGATTCTTGCTCATGTA 535
|||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| ||||
Sbjct 476 AATGTTTCCGAGCAATGATCTCTGGTCTGCTTCCATGCTCTGATGATTCTTGCTCTTGTA 535
Query 536 AGCGCACTGTTGGCTGGCCTCAACTGTCAGATAGAAGAGATTATCAAACTCAAGTTTCAG 595
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 536 AGCGCACTGTTGGCTGGCCTCAGCTGTCAGATAGAAGAGATTATCAAACTCAAGTTTCAG 595
Query 596 AGTCTTATAAGTATGATTTTGAAAATCGAGAATGCTTGCTTTCATTTCTTCAGTCTCAGT 655
|||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct 596 AGTCTTATAAGTATGATTTTGAAACTCGTGAATGCTTGCTTGCATTTCTTCAGTCTCAGT 655
Query 656 CTGCTTTGGCTGCTGT-GGATCATTGGCTTTCCATTCTTCTCAAAGTCGCTGATGCTGAG 714
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 656 CTGCTTTGGCTGCTGTCGG-TCATTGGCTTTCCATTCTTCTCAAAGTCGCTGATGCTGAG 714
Query 715 GCTTCTCGAGGACATCGAGGAAGTGCAAATCTTCGAGTTGAAGCCTTTATGGTTTTACGG 774
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 715 GCTTCTCGAGGACATCGAGGAAGTGCAAATCTTCGAGTTGAAGCCTTTATGGCTTTACGG 774
Query 775 ATACTTGTGGCTAAGATTGGTACTGCTGATGTGTTGGCGTTTTTTCTACCTGGTGTTGTT 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 ATACTTGTGGCTAAGATTGGTACTGCTGATGTGTTGGCGTTTTTTCTACCTGGTGTTGTT 834
Query 835 AGCCAAATTGCCAAAGTGTTGCATGTTTCGAGAGCAATGATAAGCGGAGCTGCAGGAAGT 894
|||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 AGCCAAGTTTTCAAAGTGTTGCATGTTTCGAGAGCAATGATAAGCGGAGCTGCAGGAAGT 894
Query 895 GTTGATGCATTGGACCAAGCAATTAGAGGGTTAGCGGAGTTTCTTATGATCGTCCTTGAG 954
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 895 GTTGATGCATTGGACCAAGCAATTAGAGGGTTAGCTGAGTTTCTTATGATCGTCCTTGAG 954
Query 955 GATGAGGCTAATTCATCGGCTCTCGACATTTCTGATGATGATACTAAGTCGCAGAAGCAT 1014
|||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| |||
Sbjct 955 GATGAGGCTAATTCATCGGCTCTCGAGATTTCTAATGGTGATACTAAGTCGCAGAAACAT 1014
Query 1015 GAATCTGCACACTCAATTTTAGACGAACTTCGTTCTCTGTCAACAAAATCTCAAGGGCAG 1074
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1015 GAATCTGCACACTCAATTTTAGACGAACTTCGTTCTCTGACAACAAAATCTCAAGGACAG 1074
Query 1075 AGCGACGAGCTGACAGAAATTACAAACCAAGAGATTGTTACCATCAATGTACCTGAAAAA 1134
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1075 AGTGACGAGCTGACAGAAATTACAAACCAAGAGATTGTTAACATCAATGTACCTGAAAAA 1134
Query 1135 TCCAATCTGAATCTGAGTCGTGACTCCTTTCATGTTGAACGTACGAAGAAATGGTTAGAT 1194
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 1135 TCCAATCTGAATCTGAGTCGTGACTCCTTTCTTGTTGAACGCACGAAGAAATGGTTAGAT 1194
Query 1195 AGCACTACATCTCACGTGAATAAGCTGCTGTGTGAGACATTTCCTCATATTCTTATTCAC 1254
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 AGCACTACATCTCACGTAAATAAGCTGCTGTGTGAGACATTTCCTCATATTCTTATTCAC 1254
Query 1255 CCAGCCGGCAAAATTCGATGGGGATTTCTAGCAGCAATACGTGGATTGCTATCTAAGAGC 1314
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 1255 CCAGCCGGCAAAATTCGATGGGGATTTCTAGCAGCAATACGTGGACTGCTCTCTAAGAGC 1314
Query 1315 TCTTGCTCGTTGAAGGGTGCTAGATTAGTGATGTTGGAATGCGTATGTACTCTGGCTGTC 1374
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 TCTTGCTCGTTGAAGGGTGCTAGATTAGTGATGTTGGAATGCGTATGTACTCTGGCTGTT 1374
Query 1375 GATGACTCCGATGAAGTTTCTGTAGCAGCTCAGGAATTTCTCGATGATTTATTCTCCGAA 1434
|||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 1375 GATGACTCTGATGAAGTTTCTGTAGCAGCTCAGGAATTTCTCGATCATTTATTCTCAGAA 1434
Query 1435 AGTACAAAATACCATGTAGAGAGTGATATAATTAAGATCTTTAGCAGACTACTTGAGAGG 1494
||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1435 AGTACAAAAAACCATGTAGAGAGTGATATAAAAAAGATCTTTAGCAGACTACTTGAGAGG 1494
Query 1495 CTTCCAAAAGTGGTTCTGGGGAATGAGGAATTGCCTGCACTTTCGGTGGTGAAGCA 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495 CTTCCAAAAGTGGTTCTGGGGAATGAGGAATTGCCTGCACTTTCGGTGGTGAAGCA 1550
Score = 270 bits (146), Expect = 6e-71
Identities = 150/152 (99%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 1551 CCATAATTCAGCATTCACCGGGTCTCTTGAGAAACTCATCGCAGAAAGGCCTTCATCATC 1610
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1656 CCATAATTCAGCATTCACCGGTTCTCTTGAGAAACTCATCGCAGAAAGGCCTTCATCATC 1715
Query 1611 GACAGGTTACCTCCCTTCTATCACAGAACTAAAAGTGGGGTTCCGGGAGACCAGATACAA 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1716 GACAGGTTACCTCCCTTCTATCACAGAACTAAAAGTGGGGTTCCGGGAGACCAGATACAA 1775
Query 1671 CCGTGCTGTTACAAATATCACAGAAACAGATC 1702
|||||||||| |||||||||||||||||||||
Sbjct 1776 CCGTGCTGTTCCAAATATCACAGAAACAGATC 1807
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 191637722260
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5