BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477113 Length=2494 Score E Sequences producing significant alignments: (Bits) Value AT1G79460.1 | Symbols: GA2, KS, ATKS, ATKS1, KS1 | Terpenoid cy... 4071 0.0 > AT1G79460.1 | Symbols: GA2, KS, ATKS, ATKS1, KS1 | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr1:29890392-29894587 FORWARD LENGTH=2576 Length=2576 Score = 4071 bits (2204), Expect = 0.0 Identities = 2404/2499 (96%), Gaps = 19/2499 (1%) Strand=Plus/Plus Query 1 CGTCACTCGTCAAGGCTAATTCCTCGCAAGTTGCTACGACGCCGTTTCGGTTGCTTCTGG 60 ||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct 1 CGTCAGTCGTCAAGGCTAATTCGTCGCGAGTTGCTACGACGCCGTTTCGGTTGCTTCTGG 60 Query 61 TTTCTCCATGTCTATCAACCTCCGCTCCTCCGGTTGTTCGTCTCCGATCTCAGCTACTTT 120 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTCTTTATGTCTATCAACCTTCGCTCCTCCGGTTGTTCGTCTCCGATCTCAGCTACTTT 120 Query 121 GGAAAAGAGATTGGAAGCGGTAGAT-CAGACAAGAGCTAACAATGTGAGTTTTGAGCAAA 179 |||| ||||||||| | | || | ||||||||||||||||||||||| |||||||||| Sbjct 121 GGAACGGAGATTGGACTCAGAAG-TACAGACAAGAGCTAACAATGTGAGCTTTGAGCAAA 179 Query 180 CAAAGGACAAGATTAGGAAGATGTTGGATAAAGTGGAGCTTTCTGTTTCGGCCTACGATA 239 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 180 CAAAGGAGAAGATTAGGAAGATGTTGGAGAAAGTGGAGCTTTCTGTTTCGGCCTACGATA 239 Query 240 CTAGTTGGGTAGCAATGGTTCCATCACCGA-CTTCCCAAAATGCTCCACTTTTCCCACAG 298 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 240 CTAGTTGGGTAGCAATGGTTCCATCACCGAGC-TCCCAAAATGCTCCACTTTTCCCACAG 298 Query 299 TGTGTGAAATGGTTATTGGAAT-ATCAACATGAAGATGGATCTTGGGGACTTGATAATCA 357 ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| || Sbjct 299 TGTGTGAAATGGTTATTGG-ATAATCAACATGAAGATGGATCTTGGGGACTTGATAACCA 357 Query 358 TGACCATCAATCTCTTAAGAAGGATGTGTTATCATCTACACTGGCTAGTATCCTCGCGTT 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 TGACCATCAATCTCTTAAGAAGGATGTGTTATCATCTACACTGGCTAGTATCCTCGCGTT 417 Query 418 AAAGAAGTGGGGAACTGGTGAAAGACAAATAAACAAGGGTCTCCAGTTTATTGAGCTGAA 477 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 AAAGAAGTGGGGAATTGGTGAAAGACAAATAAACAAGGGTCTCCAGTTTATTGAGCTGAA 477 Query 478 TTCTGCATCAGTCACTGATGAAACCATACAGAAACCAGCAGGATTTGATATTATATTTCC 537 |||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 478 TTCTGCATTAGTCACTGATGAAACCATACAGAAACCAACAGGGTTTGATATTATATTTCC 537 Query 538 TGGGATGATTGAATATGCTAGAGATTTGAATCTGGCGATTCCATTGGGCTCAGAAGTGGT 597 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 538 TGGGATGATTAAATATGCTAGAGATTTGAATCTGACGATTCCATTGGGCTCAGAAGTGGT 597 Query 598 GGATGCCATGATACGAAAAAGAGATCTGGATCTTAAATGTGATAGTG-AAAGATTTTCAA 656 ||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 598 GGATGACATGATACGAAAAAGAGATCTGGATCTTAAATGTGATAGTGAAAAG-TTTTCAA 656 Query 657 AGGGAAGAGAAGCATATCTGGCCTATGTTTTAGAGGGAACAAGAAATCTCAAAGATTGGG 716 ||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||| Sbjct 657 AGGGAAGAGAAGCATATCTGGCCTATGTTTTAGAGGGGACAAGAAACCTAAAAGATTGGG 716 Query 717 ATTTGATAGTCAAATACCAAAGGAAAAATGGGTCACTGTTTGATTCTCCAGCCATAACAG 776 |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct 717 ATTTGATAGTCAAATATCAAAGGAAAAATGGGTCACTGTTTGATTCTCCAGCCACAACAG 776 Query 777 CAGCTGCATTTACTCAGTTTGGAAATGATGGTTGTCTCCGTTATCTCTGTTCTCTCCTTC 836 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 777 CAGCTGCTTTTACTCAGTTTGGGAATGATGGTTGTCTCCGTTATCTCTGTTCTCTCCTTC 836 Query 837 AGAAATTTGAGGCTGCAGTTCCTACAGTTTATCCATTTGATCAATATGCACGCCTTAGTT 896 ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 837 AGAAATTCGAGGCTGCAGTTCCTTCAGTTTATCCATTTGATCAATATGCACGCCTTAGTA 896 Query 897 TAATTGTCACCCTTGAAAGCTTAGGAATTGATAGAGATTTCAAAACCGAAATCAAAAGCA 956 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 897 TAATTGTCACTCTTGAAAGCTTAGGAATTGATAGAGATTTCAAAACCGAAATCAAAAGCA 956 Query 957 TATTGGATGAAACCTATAGATATTGGCTTCGTGGGGATGAAGAAATATGTTTGGAGTTGG 1016 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 957 TATTGGATGAAACCTATAGATATTGGCTTCGTGGGGATGAAGAAATATGTTTGGACTTGG 1016 Query 1017 CCACTTGTGCTTTGGCTTTCCGATTATTACTCGCTCATGGCTATGATGTGTCTTACGATC 1076 ||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||| Sbjct 1017 CCACTTGTGCTTTGGCTTTTCGATTATTGCTTGCTCATGGCTATGATGTGTCTTACGATC 1076 Query 1077 CGCTAAAACCATTTGCAGAAGAATCTGGTTTTTCTGATACTTTGGAAGGATATGTTAAGA 1136 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1077 CGCTAAAACCATTTGCAGAAGAATCTGGTTTCTCTGATACTTTGGAAGGATATGTTAAGA 1136 Query 1137 ATACGTTTTCTGTGTTAGAATTATTTAAGGCTGCCCAAAGTTATCCACATGAATCAGCTT 1196 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1137 ATACGTTTTCTGTGTTAGAATTATTTAAGGCTGCTCAAAGTTATCCACATGAATCAGCTT 1196 Query 1197 TGAAGAAGCAGTGTTCTTGGACTAAGCAATATCTGGAGATGGAATTGTCCAACTGGCTTA 1256 ||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||| Sbjct 1197 TGAAGAAGCAGTGTTGTTGGACTAAACAATATCTGGAGATGGAATTGTCCAGCTGGGTTA 1256 Query 1257 AGACCTCTGTTCGAGATAAATACCTCAAGAAAGAGGTCGAGGATGCTCTTGCTTTTCCCT 1316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1257 AGACCTCTGTTCGAGATAAATACCTCAAGAAAGAGGTCGAGGATGCTCTTGCTTTTCCCT 1316 Query 1317 CCTATGCAAGCCTAGAAAGATCAGATCACAGGAGAAAACTACTCAATGGTTGTGTTTTTT 1376 |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1317 CCTATGCAAGCCTAGAAAGATCAGATCACAGGAGAAAAATACTCAATGGTT--------- 1367 Query 1377 CTGCTGTGGAAAACACCAGAGTTACAAAAACCTCATATCGTTTGCACAATATTTGCAGCT 1436 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1368 CTGCTGTGGAAAACACCAGAGTTACAAAAACCTCATATCGTTTGCACAATATTTGCACCT 1427 Query 1437 CTGGTATCCTGAAGTTAGCTGTGGATGACTTCAATTTCTGCCAGTCCATACACCGTGAAG 1496 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1428 CTGATATCCTGAAGTTAGCTGTGGATGACTTCAATTTCTGCCAGTCCATACACCGTGAAG 1487 Query 1497 AAATGGAACGTCTTGATAGGTGGATTGTGGAGAATAGATTGCAGGAACTGAAATTTGCCA 1556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1488 AAATGGAACGTCTTGATAGGTGGATTGTGGAGAATAGATTGCAGGAACTGAAATTTGCCA 1547 Query 1557 GACAGAAGCTGGCCTACTGTTATTTCTCTGGGGCTGCAACTTTATTTTCTCCAGAACTAT 1616 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1548 GACAGAAGCTGGCTTACTGTTATTTCTCTGGGGCTGCAACTTTATTTTCTCCTGAACTAT 1607 Query 1617 CTGATGCCCGTATATCGTGGGCCAAAGGTGGAGTACTTACAACGGTTGTAGACGACTTCT 1676 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1608 CTGATGCTCGTATATCGTGGGCCAAAGGTGGAGTACTTACAACGGTTGTAGACGACTTCT 1667 Query 1677 TTGATGTGGGAGGGTCCAAAGAAGAACTGGAAAACCTCATACACTTGGTCGAAAAGTGGG 1736 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1668 TTGATGTTGGAGGGTCCAAAGAAGAACTGGAAAACCTCATACACTTGGTCGAAAAGTGGG 1727 Query 1737 ATTTGAACGGTGTTCCTGAGTACCGCTCAGAACATGTTGAGATCATATTCTCAGTTCTAA 1796 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1728 ATTTGAACGGTGTTCCTGAGTACAGCTCAGAACATGTTGAGATCATATTCTCAGTTCTAA 1787 Query 1797 GGGACACAATTCTCGAAACAGGAGAGAAAGCATTCATCTATCAAGGACG-AAGTGTGACA 1855 ||||||| ||||||||||||||||| |||||||||| |||||||||||| || ||||||| Sbjct 1788 GGGACACCATTCTCGAAACAGGAGACAAAGCATTCACCTATCAAGGACGCAA-TGTGACA 1846 Query 1856 CACCAGATTGTGAAAATTTGGTTGGATCTGCTCAAGTCTATGTTGAGAGAAGCGGAGTTG 1915 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 1847 CACCACATTGTGAAAATTTGGTTGGATCTGCTCAAGTCTATGTTGAGAGAAGCCGAGTGG 1906 Query 1916 TCCAGTGACAAGTCAACACCAAGCTTGGAGGATTACATGGAAAATGCGTACATATCATTT 1975 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1907 TCCAGTGACAAGTCAACACCAAGCTTGGAGGATTACATGGAAAATGCGTACATATCATTT 1966 Query 1976 GCATTAGGACCAATTGTCCTCCCAGCTACCTATCTGATCGGTCCACCACTTCCAGAGAAG 2035 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 1967 GCATTAGGACCAATTGTCCTCCCAGCTACCTATCTGATCGGACCTCCACTTCCAGAGAAG 2026 Query 2036 ATAGTCGATAGCCACCAATATAAGAAGCTCTACAAGCTCGTGAGCACTATGGGTCGTCTT 2095 | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2027 ACAGTCGATAGCCACCAATATAATCAGCTCTACAAGCTCGTGAGCACTATGGGTCGTCTT 2086 Query 2096 CTAAATGACATACAAGGTTTTAAGAGAGAAAGCGCGGAAGGGAAGCTGAATGCGGTTTCA 2155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2087 CTAAATGACATACAAGGTTTTAAGAGAGAAAGCGCGGAAGGGAAGCTGAATGCGGTTTCA 2146 Query 2156 TTGCACATGAGACACGAGAGAGACAATCGCAGCAAAGAAGAAATCATAGAATCGATGAAA 2215 |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2147 TTGCACATGAAACACGAGAGAGACAATCGCAGCAAAGAAGTGATCATAGAATCGATGAAA 2206 Query 2216 GGTTTAGCAGAGAGAAAGAGGGAAGAATTGCATAAGCTAGTTTTGGAGGAGAAAGGAAGT 2275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2207 GGTTTAGCAGAGAGAAAGAGGGAAGAATTGCATAAGCTAGTTTTGGAGGAGAAAGGAAGT 2266 Query 2276 GCGGTTCCAAGGGAATGCAAAGAAGTGTTCTTGAAAATGAGCAAAGTGTTGAACCTATTT 2335 | ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 2267 GTGGTTCCAAGGGAATGCAAAGAAGCGTTCTTGAAAATGAGCAAAGTGTTGAACTTATTT 2326 Query 2336 TACAGGAAGGACGATGGGTTCACATCAGATGATCTGATGAGTCTTGTTAAATCTGTGATC 2395 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| Sbjct 2327 TACAGGAAGGACGATGGATTCACATCAAATGATCTGATGAGTCTTGTTAAATCAGTGATC 2386 Query 2396 TACGAGCCTGTTACCTTACAGGAAGAATCTTTAACTTGATCCAAGTTGATCTGGGATGTA 2455 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 2387 TACGAGCCTGTTAGCTTACAGGAAGAATCTTTAACTTGATCCAAGTTGATCTGGCAGGTA 2446 Query 2456 AACTCAGTATATGAAAATAAGACTTTGGTCTTCTTCTTT 2494 ||||||||| ||||||||||||||||||||||||||||| Sbjct 2447 AACTCAGTAAATGAAAATAAGACTTTGGTCTTCTTCTTT 2485 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 123761848381 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5