BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477114
Length=1627
Score E
Sequences producing significant alignments: (Bits) Value
AT1G79470.1 | Symbols: | Aldolase-type TIM barrel family prote... 2560 0.0
AT1G16350.1 | Symbols: | Aldolase-type TIM barrel family prote... 1212 0.0
> AT1G79470.1 | Symbols: | Aldolase-type TIM barrel family protein
| chr1:29894598-29897166 REVERSE LENGTH=1950
Length=1950
Score = 2560 bits (1386), Expect = 0.0
Identities = 1544/1621 (95%), Gaps = 8/1621 (0%)
Strand=Plus/Plus
Query 9 CAAAAACCCTTCCGCTTAAACCCTAATTCACTTCGCCGGCCATGTCGAGATTCGAGGACG 68
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct 224 CAAAAACCCTTCCGCTTAAACCCTAATTCACTTCGCCGGCCATGTCGACACTCGAGGATG 283
Query 69 GCTTTGCTGCGGATAAGCTCTTCGCTCAGGGATACTCCTACACTTACGACGACGTCATCT 128
| ||| | |||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct 284 GATTTCCGGCGGATAAGCTCTTCGCTCAAGGATACTCTTACACCTACGACGACGTCATCT 343
Query 129 TTCTTCCTCACTACATTGATTTCTCCACAGACGCTGTTTCTCTATCCACGCGCCTTAGCC 188
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 344 TTCTTCCTCACTTCATCGATTTCTCCACAGACGCTGTTTCTCTATCCACGCGCCTTAGCC 403
Query 189 GGCGCGTGCCTCTCTCGATACCCTGCGTTTCGTCTCCGATGGACACTGTCTCGGAGTCTC 248
|||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| ||||
Sbjct 404 GGCGCGTGCCTCTCTCCATACCTTGCGTTTCGTCTCCGATGGATACTGTTTCGGAATCTC 463
Query 249 ACATGGCTGCTGCTATGGCTGCCCTTGGTGGGATTGGAATCGTGCACTATAACTGTGACA 308
|||||||||||||||||||| | |||||||||||||||||||| ||||||||||||| ||
Sbjct 464 ACATGGCTGCTGCTATGGCTTCTCTTGGTGGGATTGGAATCGTCCACTATAACTGTGGCA 523
Query 309 TCGCCGCTCAGGCATCGATTATTCGCCAAGCCAAGTCGCTCAAACATCCGATTGCTTCCG 368
|||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 524 TCGCCGCTCAAGCATCGATTATTCGCCAAGCTAAGTCGCTTAAACATCCGATTGCTTCCG 583
Query 369 ACGCCGGTGTGAAGTTCCCGGAGTATGAGATTACTTCTTTAGATGCTTTTGGTCCTTCTT 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 584 ACGCCGGTGTGAAGTTCCCGGAGTATGAGATTACTTCTTTAGATGCTTTTGGTCCTTCTT 643
Query 429 CATTCGTTTTTGTC-ACGCAAACAGGAACAATGACGACTCCGAAATTGTTAGGCTATGTA 487
| |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 644 CCTTCGTTTTTGTCGA-GCAAACAGGAACAATGACGACTCCTAAATTGTTAGGCTATGTA 702
Query 488 TCGAAATCGCAGTGGACGAGAATGAATTACGAACAAAGGGAGATGAAGATATACGATTAC 547
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 703 ACGAAATCGCAGTGGAAGAGAATGAATTACGAACAAAGGGAGATGAAGATATACGATTAC 762
Query 548 ATGAAGAGCTGTGATAGCAGCGACTATTGTTTACCATGGGACATTGATCTTGAAAAATTG 607
|||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||| |||
Sbjct 763 ATGAAGAGCTGTGATAGCAGTGACTATTGTGTACCATGGGAAATTGATTTTGAAAAGTTG 822
Query 608 GAGTTTGTTTTAGAAGATAAGCAAAAGGGCTTTGTGGTTCTTGAGAGGGATGGTGAGACT 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 GAGTTTGTTTTAGAAGATAAGCAAAAGGGCTTTGTGGTTCTTGAGAGGGATGGTGAGACT 882
Query 668 GTGAACGTGGTGAC-AAAGGACGATATAGAGAGGGTTAAAGGATATCCCAAGTCAGGACC 726
|||||||||||||| ||| || |||||| ||||||||||||||||||||||||| |||||
Sbjct 883 GTGAACGTGGTGACGAAA-GATGATATACAGAGGGTTAAAGGATATCCCAAGTCTGGACC 941
Query 727 AGGGACCGTGGGTCCTGACGGTGAGTGGATGGTTGGTGCAGCGATTGGGACGAGGGAATC 786
|||||| ||||| || ||||||||||||||||||||||||||||| || |||||||| ||
Sbjct 942 AGGGACTGTGGGCCCAGACGGTGAGTGGATGGTTGGTGCAGCGATAGGTACGAGGGAGTC 1001
Query 787 TGATAAGGAGAGGCTGGAGCATTTGGTTGATGCTGGGGTCAATGCCGTTGTGTTGGATAG 846
||||||||||||||| |||||||||||| ||| |||||||||||| || |||||||||||
Sbjct 1002 TGATAAGGAGAGGCTTGAGCATTTGGTTAATGTTGGGGTCAATGCTGTAGTGTTGGATAG 1061
Query 847 TTCGCAAGGGAACTCTATTTACCAGCTTGAGATGATCAAGTATGTGAAAAATACTTACCC 906
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1062 TTCGCAAGGGAACTCTATTTACCAGCTTGAGATGATCAAGTATGTGAAAAAGACTTACCC 1121
Query 907 TCAATTGGATGTCATTGGTGGCAATGTTGTGACAATGTACCAGGCACAGAATTTGATCCA 966
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1122 TGAATTGGATGTGATTGGTGGCAATGTTGTGACAATGTACCAGGCACAGAATTTGATCCA 1181
Query 967 AGCAGGAGTTGATGGGTTGAGAGTCGGTATGGGATCTGGTTCGATATGTACCACTCAAGA 1026
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1182 AGCAGGAGTTGATGGGTTGAGAGTTGGTATGGGATCTGGTTCGATATGTACCACACAAGA 1241
Query 1027 GGTTTGTGCAGTTGGTCGTGGACAGGCTACTGCTGTGTACAAGGTTTGTTCGATCGCCGC 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1242 GGTTTGTGCAGTTGGTCGTGGACAGGCTACTGCTGTGTACAAGGTTTGTTCGATCGCTGC 1301
Query 1087 TCAGAGCGGGATTCCAGTTATAGCGGATGGTGGTATCTCAAATTCAGGTCACATTGTAAA 1146
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1302 TCAGAGCGGGATTCCAGTTATAGCGGATGGTGGTATCTCAAATTCAGGGCACATTGTAAA 1361
Query 1147 GGCTCTCGTCCTTGGAGCATCAACTGTTATGATGGGTAGCTTTTTAGCTGGAAGTACTGA 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 GGCTCTCGTCCTTGGAGCATCAACTGTTATGATGGGTAGCTTTTTAGCTGGAAGTACTGA 1421
Query 1207 GGCTCCCGGGGGTTACGAGTATAAGAACGGTAAGAGGATCAAGAAGTACCGTGGAATGGG 1266
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1422 GGCTCCCGGGGGTTACGAGTATACGAACGGTAAGAGGATCAAGAAGTACCGTGGAATGGG 1481
Query 1267 ATCGCTAGAAGCAATGACTAAAGGAAGTGACCAAAGATACTTGGGAGATAAAACAAAACT 1326
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 1482 ATCGCTAGAAGCAATGACTAAAGGAAGTGACCAAAGATACTTAGGAGATCAAACAAAACT 1541
Query 1327 CAAGATTGCTCAAGGAGTGGTTGGAGCAGTCGCGGATAAAGGTTCAGTATTGAAGCTGAT 1386
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1542 CAAGATTGCTCAAGGAGTGGTTGGAGCAGTCGCGGATAAAGGCTCAGTGTTGAAGCTGAT 1601
Query 1387 ACCTTACACAATGCACGCCGTGAAACAAGGTTTCCAAGACCTCGGTGCTTCTTCCTTGCA 1446
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1602 ACCTTACACAATGCACGCCGTGAAACAAGGTTTCCAAGACCTTGGTGCTTCTTCCTTGCA 1661
Query 1447 ATCTGCTCATGACCTGTTGAGATCAGACATCCTTAGGCTTGAGGCTCGAACTGGTGCAGC 1506
||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 1662 ATCTGCTCATGGTCTGTTGAGATCAAACATCCTTAGGCTTGAGGCTCGAACTGGTGCTGC 1721
Query 1507 ACAGGTCGAAGGAGGAGTTCACGGGCTGGTTTCTTATGAAAAGAAATCGTTTTAAGCTTT 1566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1722 ACAGGTCGAAGGAGGAGTTCACGGGCTGGTTTCTTATGAAAAGAAATCGTTTTAAGCTTT 1781
Query 1567 CGCCAAAAATTGAGGATTTTTGACGAGTGTTTCTTATATTATGTTCCATGTTATTTTTAT 1626
||| ||||||||| | | | ||||||||||||||| ||||||||||||||||||||
Sbjct 1782 GGCCTAAAATTGAG--TGCTA-A-GAGTGTTTCTTATATCATGTTCCATGTTATTTTTAT 1837
Query 1627 A 1627
|
Sbjct 1838 A 1838
> AT1G16350.1 | Symbols: | Aldolase-type TIM barrel family protein
| chr1:5590951-5593007 FORWARD LENGTH=1644
Length=1644
Score = 1212 bits (656), Expect = 0.0
Identities = 1253/1541 (81%), Gaps = 42/1541 (3%)
Strand=Plus/Plus
Query 50 ATGTCGA-GATTCGAGGACGGCTTTGCTGCGGATAAGCTCTTCGCTCAGGGATACTCCTA 108
||||| | ||||||| || || ||| | || || ||||| ||| | || |||||||| ||
Sbjct 1 ATGTC-AGGATTCGAAGATGGATTTTCAGCTGAAAAGCTATTCTCACAAGGATACTCATA 59
Query 109 CACTTACGACGACGTCATCTTTCTTCCTCACTACATTGA-TTTCTCCACAGACGCTGTTT 167
||| |||||||| || || ||||| || |||| ||| || ||| ||||| ||||| || |
Sbjct 60 CACCTACGACGATGTGATATTTCTACCACACTTCATCGACTTT-TCCACTGACGCCGTCT 118
Query 168 CTCTATCCACGCGCCTTAGCCGGCGCGTGCCTCTCTCGATACCC-TGCGTTTCGTCTCCG 226
| ||||||||||| || ||| |||||| || |||||||| ||| ||||| | || |||
Sbjct 119 CGCTATCCACGCGTCTCAGCAAGCGCGTCCCACTCTCGAT-CCCATGCGTCGCTTCGCCG 177
Query 227 ATGGACACTGTCTCGGAGTCTCACATGGCTGCTGCTATGGCTGCCCTTGGTGGGATTGGA 286
||||||||||||||||| || |||||||||||||| |||||||| ||||| || || |||
Sbjct 178 ATGGACACTGTCTCGGAATCCCACATGGCTGCTGCAATGGCTGCTCTTGGAGGAATCGGA 237
Query 287 ATCGTGCACTATAACTGTGACATCGCCGCTCAGGCAT-CGATTATTCGCCAAGCCAAGTC 345
||||||||||||||||| ||||||| |||| || | || |||| || || || || ||
Sbjct 238 ATCGTGCACTATAACTGCGACATCGATACTCAAGCTTCCG-TTATCCGTCACGCTAAATC 296
Query 346 GC-TCAAACATCCGATTGCTTCCGACGCCGGTGTGAAGTTCCCGGAGTATGAGATTACTT 404
|| || || ||||||||| || || || | | | || | ||| ||| | ||||| ||
Sbjct 297 GCTTC-AAGTTCCGATTGCGTCTGATGCTGTTTTTAAATGCCCAGAGCACCAGATTGGTT 355
Query 405 CT-TTAGATGCTTTTGGTCCTTCTTCATTCGTTTTTGTCACGCAAACAGGAACAATGACG 463
|| || |||| ||||||||||||||| |||||||||||| |||| || |||||| ||||
Sbjct 356 CTGTT-GATGATTTTGGTCCTTCTTCCTTCGTTTTTGTCTCGCAGACGGGAACATTGAC- 413
Query 464 ACTCCGAAATTGTTAGGCTATGTATCGAAATCGCAGTGGACGAGAATGAATTACGAACAA 523
| ||||||||||| || ||||| || |||||| ||||| |||| ||||| | || |||
Sbjct 414 A--CCGAAATTGTTGGGTTATGTTTCAAAATCGGAGTGGTCGAGTATGAAAGATGACCAA 471
Query 524 AGGGAGATGAAGATATACGATTACATGAAGAGCTGTGATAGCAGCGACTATTGTTTACCA 583
| |||| |||||||||| |||||||||||||| ||||| | || || || | | | |||
Sbjct 472 AAGGAGGTGAAGATATATGATTACATGAAGAGTTGTGAGAACAAAGATTACTATGTGCCA 531
Query 584 TGGGACATTGATCTTGA-AAAATTGGAGTTTGTTTTAGAAGATAAGCA-AAAGGGCTTTG 641
||||| ||||||||||| || ||| ||| ||||| ||||||||||| |||||| ||||
Sbjct 532 TGGGATATTGATCTTGACAAGATT-GAGGCGGTTTTGGAAGATAAGCAGAAAGGG-TTTG 589
Query 642 TGGTTCTTGAGAGGGATGGTGAGACTGTGAACGTGGTGACAAAGGACGATATAGAGAGGG 701
| ||||| |||| ||| ||||||||||||||||| || ||||| |||||| | |||||||
Sbjct 590 TTGTTCTGGAGAAGGAAGGTGAGACTGTGAACGTAGTAACAAAAGACGATGTGGAGAGGG 649
Query 702 TTAAAGGATATCCCAAGTCAGGACCAGGGACCGTGGGTCCTGACGGTG-AGTGGATGGTT 760
|||||||||||||||||| ||| |||| || || ||| | ||| | | |||||||||
Sbjct 650 TTAAAGGATATCCCAAGTTAGGGTCAGGAACTGTTGGTGCAGAC-AAGAAATGGATGGTT 708
Query 761 GGTGCAGCGATTGGGACGAGGGAATCTGATAAGGAGAGGCTGGAGCATTTGGTTG-ATGC 819
||||| || || ||||| |||||||| || ||||||||||| ||||| || | || | ||
Sbjct 709 GGTGCTGCTATAGGGACAAGGGAATCAGACAAGGAGAGGCTAGAGCACTTAG-TGAAAGC 767
Query 820 TGG-GGTCAATGCCGTTGTGTTGGATAGTTCGCAAGGGAACTCTATTTACCAGCTTGAGA 878
||| | | |||| || |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 768 TGGAGCT-AATGTTGTGGTGTTGGATAGTTCGCAAGGGAACTCGATTTACCAGCTTGAGA 826
Query 879 TGATCAAGTATGTGAAAAATACTTACCCTCAATTGGATGTCATTGGTGGCAATGTTGTGA 938
|||||||||||||||| ||||| || || | |||||||| | ||||| ||||| ||||
Sbjct 827 TGATCAAGTATGTGAAGAATACGTATCCGGAGTTGGATGTGGTCGGTGGGAATGTGGTGA 886
Query 939 CAATGTACCAGGCACAGAATTTGATCCAAGCAGGAGTTGATGGGTTGAGAGTCGGTATGG 998
| ||||||||||| |||| |||||| ||||||||||||||||||| ||||| |||||||
Sbjct 887 CTATGTACCAGGCTGAGAACTTGATCAAAGCAGGAGTTGATGGGTTAAGAGTTGGTATGG 946
Query 999 GATCTGGTTCGATATGTACCACTCAAGAGGTTTGTGCAGTTGGTCGTGGACAGGCTACTG 1058
||||||| || ||||| || || |||||||||||||| ||||| || |||||||||||||
Sbjct 947 GATCTGGATCTATATGCACAACACAAGAGGTTTGTGCCGTTGGACGAGGACAGGCTACTG 1006
Query 1059 CTGTGTACAAGGTTT-GTTCGA-TCGCCGCTCAG-AGCGG-GATTCCAGTTATAGCGGAT 1114
| |||||||| || | | | | | || |||||| | ||| | | || ||||| || |||
Sbjct 1007 CCGTGTACAAAGTCTCGA-C-ACTAGCTGCTCAGCA-CGGTG-TACCTGTTATCGCAGAT 1062
Query 1115 GGTGGTATCTCAAATTCAGGTCACATTGTAAAGGCTCTCGTCCTTGGAGCATCAACTGTT 1174
||||| |||||||| |||||||||||||| |||||||| || || ||||||||||| ||
Sbjct 1063 GGTGGCATCTCAAACTCAGGTCACATTGTGAAGGCTCTAGTTCTGGGAGCATCAACGGTG 1122
Query 1175 ATGATGGGTAGCTTTTTAGCTGGAAGTACTGAGGCTCCCGGGGGTTACGAGTATAAGAA- 1233
|||||||| ||||| || |||||||| || |||||||| || | || || ||| |||
Sbjct 1123 ATGATGGGAAGCTTCTTGGCTGGAAGCACCGAGGCTCCTGGAGCCTATGAATATC-GAAA 1181
Query 1234 CGGTAAGAG-GATCAAGAAGTACCGTGGAATGGGATCGCTAGAAGCAATGACTAAAGGAA 1292
||||| ||| | | ||||| ||| | || ||||| || ||||||||||||| |||||||
Sbjct 1182 CGGTAGGAGAG-TGAAGAAATACAGAGGTATGGGTTCATTAGAAGCAATGACCAAAGGAA 1240
Query 1293 GTGACCAAAGATACTTGGGAGATAAAACAAAACTCAAGATTGCTCAAGGAGTGGTTGGAG 1352
| ||||| |||||||||||||||| | |||||||||||||| ||||||||||||||||
Sbjct 1241 GCGACCAGAGATACTTGGGAGATACCGCGAAACTCAAGATTGCACAAGGAGTGGTTGGAG 1300
Query 1353 CAGTCGCGGATAAAGGTTCAGTATTGAAGCTGATACCTTACACAATGCACGCCGTGAAAC 1412
| || || |||||||| ||||| |||||| | ||||| ||||||||||| |||||||| |
Sbjct 1301 CGGTTGCAGATAAAGGCTCAGTGTTGAAGTTTATACCATACACAATGCATGCCGTGAAGC 1360
Query 1413 AAGGTTTCCAAGACCTCGGTGCTTCTTCCTTGCAATCTGCTCATGACCTGTTGAGATCAG 1472
||||||| ||||| |||||||||||||| ||||| |||||||| || || |||||| |
Sbjct 1361 AAGGTTTTCAAGATCTCGGTGCTTCTTCTTTGCAGTCTGCTCACGAGCTATTGAGAG-AT 1419
Query 1473 ACAT-CC-TTAGGCTTGAGGCTCGAACTGGTGCAGCACAGGTCGAAGGAGGAGTTCACGG 1530
| || || |||| || |||||||| || |||||||||||| | ||||| ||| | || ||
Sbjct 1420 A-ATACCCTTAGACTCGAGGCTCGTACCGGTGCAGCACAGATAGAAGGTGGAATCCATGG 1478
Query 1531 GCTGGTTTCTTATGAAAAGAAATCGTTTTAAGCTTTCGCCA 1571
||||| ||||| ||||||||||||||||| |||||| |||
Sbjct 1479 ACTGGTGTCTTACGAAAAGAAATCGTTTTA-GCTTTCCCCA 1518
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80371072545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5