BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477143 Length=1425 Score E Sequences producing significant alignments: (Bits) Value AT1G79670.1 | Symbols: RFO1, WAKL22 | Wall-associated kinase fa... 2026 0.0 > AT1G79670.1 | Symbols: RFO1, WAKL22 | Wall-associated kinase family protein | chr1:29976725-29979350 REVERSE LENGTH=2431 Length=2431 Score = 2026 bits (1097), Expect = 0.0 Identities = 1287/1375 (94%), Gaps = 27/1375 (2%) Strand=Plus/Plus Query 72 GCACCAAGCTGTGTTTGTGAGTATGGTTACTTCTCTGGCTTTGGTTACAGCAACTGTTAC 131 ||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 827 GCACCGAGCTGTGTTTGTGAGTATGGTAACTTCTCTGGCTTTGGTTACAGTAACTGTTAC 886 Query 132 TGCAATCAGATTGGTTACAGAGGGAATCCATATCTTCC---TGG-TG----G--A-TG-C 179 ||||||||||||||||||||||||||||| |||||||| ||| || | | || | Sbjct 887 TGCAATCAGATTGGTTACAGAGGGAATCCTTATCTTCCTGGTGGATGCATTGACATTGAC 946 Query 180 --AT-T--GGAAGGAAAAGGACGAAACAGCTGTGGAGAACAAACTTGTGTGAATGTTCCT 234 || | |||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct 947 GAATGTGAGGAAGGAAAAGGACTAAGCAGCTGTGGAGAACTAACTTGTGTGAATGTTCCT 1006 Query 235 GGATCGTGGAGGTGCGAGCCGAA-GGAAGCACAGAAGATCAAGCCTGTGTTTCAAGGTCT 293 ||||||||||||||||||| ||| || || | ||||||||||||| |||||| |||||| Sbjct 1007 GGATCGTGGAGGTGCGAGCTGAATGG-AGTAGGGAAGATCAAGCCTCTGTTTCCAGGTCT 1065 Query 294 TGTTCTAGGTTTGGCACTATTGTTCTTGGTTCTTGGGATATGGGGATTGATCAAATTCGT 353 |||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct 1066 TGTTCTAGGTTTTCCACTGTTGTTCTTGGTACTTGGGATATGGGGATTGATCAAGTTCGT 1125 Query 354 TAAGAAGAGAAAGAAGATTATCCGAAAGAGAATGTTCTTTAAACGTAATGGAGGCTTGTT 413 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1126 TAAGAAGAGAAGGAAGATTATCCGAAAGAGAATGTTCTTTAAACGTAATGGAGGCTTGTT 1185 Query 414 GTTGAAACAACAGTTAACTACAAGAGAAAGAGGTAATGTGGAGACATCGAAGATATTCAG 473 |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||| Sbjct 1186 GTTGAAACAACAGTTAACTACAAGAG---GAGGTAATGTGCAGTCATCGAAGATATTCAG 1242 Query 474 TTCGCAAGAGCTGGAGAAAGCGACGGATAACTTCAACAAGAACAGGGTTCTTGGGCAAGG 533 |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 1243 TTCGAAAGAGCTGGAGAAAGCGACGGATAACTTCAATATGAACAGGGTTCTTGGGCAAGG 1302 Query 534 AGGTCAAGGCACTGTTTACAAAGGAATGTTGGTAGATGGACGAATCGTCGCTGTGAAAAG 593 ||||||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct 1303 AGGTCAAGGCACTGTCTACAAAGGAATGTTGGTAGATGGGCGAATTGTTGCTGTGAAAAG 1362 Query 594 GTCT-AAGCTTTTGGATGAAGACAAAGTTGAGGAGTTCATCAATGAACTTGGTGTTCTCT 652 ||| ||| |||| |||||||| |||||||||||||| ||||||||| |||||||||||| Sbjct 1363 ATCTAAAG-TTTTAGATGAAGATAAAGTTGAGGAGTTTATCAATGAAGTTGGTGTTCTCT 1421 Query 653 CGCAGATTAACCATAGAAACGTTGTCAAACTCATGGGGTGTTGTCTCGAGACAGAGGTTC 712 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1422 CGCAGATTAACCATAGAAATATTGTCAAACTCATGGGGTGTTGTCTCGAGACAGAGGTTC 1481 Query 713 CTATCTTGGTTTATGAGCATATTCCAAATGGAGACCTATTCAAGCGTCTTCATGATGATT 772 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1482 CTATCTTGGTTTATGAACATATTCCAAATGGAGACCTATTCAAGCGGCTTCACCATGATT 1541 Query 773 CTGATGACTACACTATGACTTGGGATGTGCGATTGCGCAT-TGCTGTTGAGATTGCAGGA 831 ||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 1542 CTGATGATTACACTATGACTTGGGATGTGCGATTGCGCATCT-CTGTTGAGATTGCAGGA 1600 Query 832 GCACTTGCTTACTTGCACTCGGCTGCATCAACCCCGGTCTACCACAGAGACGTCAAGACC 891 |||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||| Sbjct 1601 GCACTTGCTTACTTGCACTCGGCTGCATCAACTCCGGTCTATCATAGAGATGTCAAGACC 1660 Query 892 ACAAACATACTTTTGGATGAGAAGTATAGAGCCAAGGTATCGGATTTCGGGACTTCGAGA 951 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1661 ACAAACATACTTTTGGATGAGAAGTATAGAGCCAAGGTATCGGATTTCGGGACCTCGAGA 1720 Query 952 TCCATAAACGTAGATCAAACTCACTTGACTACTCTAGTTGCAGGTACTTTTGGATACTTG 1011 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1721 TCCATAAACGTAGATCAAACTCACTTGACTACTCTAGTTGCAGGTACTTTTGGATACTTG 1780 Query 1012 GATCCAGAGTACTTTCAAACTAGCCAGTTTACGGATAAAAGTGATGTTTATAGTTTTGGG 1071 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1781 GATCCAGAGTACTTTCAAACTAGCCAGTTTACGGATAAAAGTGATGTTTATAGTTTTGGG 1840 Query 1072 GTCGTCTTGGTTGAGCTCATAACTGGGGAAAAGCCGTTTTCTGTAATGCGGCCTGAAGAA 1131 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 1841 GTCGTCTTGGTTGAGCTCATAACTGGAGAAAAGCCGTTTTCTGTAATGCGGCCCGAAGAA 1900 Query 1132 AACAGAGGACTTGCGTCTCATTTCATTGAGGCCATGAAACAGAACAGAGTTCTTGATATT 1191 ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 1901 AACAGAGGACTTGTGTCTCATTTCAATGAGGCTATGAAACAGAACAGAGTTCTTGATATT 1960 Query 1192 GTTGATTCTCGGATCAAAGAAGATTGCAAGTTGGAACAAGTGTTGGCAGTGGCGAAACTT 1251 |||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||| Sbjct 1961 GTTGATTCTCGGATCAAAGAAGGTTGCACGTTGGAACAAGTGTTGGCTGTGGCGAAACTT 2020 Query 1252 GCCAGAAGGTGTTTAAGTCTAAAAGGGAAGAAACGGCCAAATATGAGAGAGGTTTCAATT 1311 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 2021 GCCAGAAGGTGTTTAAGTCTAAAAGGGAAGAAACGACCAAATATGAGAGAGGTTTCAGTT 2080 Query 1312 GAGCTTGAGAGGATCCGTTCATCACCTGAGGATTTGGAGGTACATATTGAAGAAGAGGAC 1371 |||||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||| Sbjct 2081 GAGCTTGAGAGGATCCGTTCATCACCCGAAGATTTGGAGTTACATATTGAAGAGGAGGAC 2140 Query 1372 GAAGAAGAAC-CGCCATGGAAATCAACATGGATGATTCTTGGAGGGTCGACATGA 1425 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2141 GAAGAAGAATGCGCCATGGAAATCAACATGGATGATTCTTGGAGCGTCGACATGA 2195 Score = 128 bits (69), Expect = 1e-28 Identities = 71/72 (99%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 1 TTTACGGTGATTGAGCTTGGATGGTACTTTGATACATCAGATTCTCGGTTAACGAATCCT 60 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 725 TTTACGGTGATTGAGCTTGGTTGGTACTTTGATACATCAGATTCTCGGTTAACGAATCCT 784 Query 61 GTGGGTTGTGTG 72 |||||||||||| Sbjct 785 GTGGGTTGTGTG 796 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70230562455 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5