BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477178 Length=1120 Score E Sequences producing significant alignments: (Bits) Value AT1G80690.1 | Symbols: | PPPDE putative thiol peptidase family... 1533 0.0 > AT1G80690.1 | Symbols: | PPPDE putative thiol peptidase family protein | chr1:30329068-30330803 REVERSE LENGTH=1178 Length=1178 Score = 1533 bits (830), Expect = 0.0 Identities = 1050/1149 (91%), Gaps = 43/1149 (4%) Strand=Plus/Plus Query 1 TTGTCATCAACTTATTCGACAGTTTATATAAAAATAAAACCGAGTCACTCTTTCATCGGA 60 ||||||||||||||||||||||||||||| | |||||||||||| |||||||||||| Sbjct 40 TTGTCATCAACTTATTCGACAGTTTATAT----A-AAAACCGAGTCA-TCTTTCATCGGA 93 Query 61 AGAACTTCCCTCCGGCCGATTTTCTGACGCCGGCGATA--CTC--T-A--TC--TC-CTC 110 || |||||||||||||| |||||||||||||||||||| ||| | | || || || Sbjct 94 AGTACTTCCCTCCGGCCCATTTTCTGACGCCGGCGATACTCTCTTTCACCTCTTTCTTTC 153 Query 111 TGTCtt-t-t-t-tttctt--tttGTTTCTCTCCGGTGAAGAAAATGTTGGAGCCATTAC 164 | |||| | | | ||| || ||||||||||||| |||| ||||||| |||| |||||| Sbjct 154 TTTCTTCTCTGTCTTTTTTGCTTTGTTTCTCTCCAGTGAGGAAAATGGCGGAGTCATTAC 213 Query 165 GATTCTCCG-CT----TAACTTG-T-AAACC-TTGAAAAGAAGAGGAAGAATTTGAAAGA 216 ||||||||| || || | | ||||| ||| |||||||||||||||||||||||| Sbjct 214 GATTCTCCGACTGAAAAAAGAAGTTAAAACCTTTG-AAAGAAGAGGAAGAATTTGAAAGA 272 Query 217 AAGGAAAATGCTTTGCCGGAAAAGCTCAAGCTTTGTGGATAGAGGCAATGTTCCGGTTTA 276 ||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||| Sbjct 273 AAGGAAAATGCTTTGCCGGAAAAACTCAAGCTTGGTGGACAGAGGAAATGTTCCGGTTTA 332 Query 277 TCTCAATGTTTACGATCTAACTCCCATTAATGGCTATGCTTACTGGCTTGGTCTTGGCGT 336 ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 333 TCTGAATGTCTACGATCTTACTCCCATTAATGGCTATGCTTACTGGCTTGGTCTTGGCGT 392 Query 337 TTACCATTCTGGTGTTGAAGTTCATGGTATAGAGTATGCTTTTGGAGCTCATGAGTATCC 396 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 393 TTACCATTCTGGTGTTGAAGTTCATGGTATAGAGTATGCTTATGGAGCTCATGAATATCC 452 Query 397 AAGCACTGGAATTTTCGAAGGGGAGCC-AAGGCAATGTGAAGGCTTTACATTTAGGAAAT 455 ||||||||| || |||||||||||||| || |||||||||||||||||| |||||||||| Sbjct 453 AAGCACTGGGATATTCGAAGGGGAGCCGAA-GCAATGTGAAGGCTTTACGTTTAGGAAAT 511 Query 456 CGATTTTGATTGGTAAAACGGATCTTGGTCCTTTGGAAGTGAGAGCTACTATGGAGCAAC 515 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 512 CGATTTTGATTGGTAAAACGGATCTTGGTCCTTTGGAAGTCAGAGCTACTATGGAGCAAC 571 Query 516 TTGCTGACAACTACAAAGGAAGTTCTTATAATCTCATCACCAAGAACTGCAACCATTTCT 575 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 572 TTGCTGACAACTACAAAGGAAGTTCTTACAATCTTATCACCAAGAACTGCAACCATTTCT 631 Query 576 GCGATGAAACTTGTATCAAGCTAACTGGGAATCCAATTCCTAGTTGGGTTAACCGCCTTG 635 |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 632 GCGATGAAACTTGTATTAAGTTAACTGGGAATCCAATTCCTAGTTGGGTTAACCGCCTTG 691 Query 636 CAAGAATCGGCTTCATGTGCAACTGTGTGCTTCCTGCGACCATAAACGCGACCAGGTTTG 695 | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 692 CCCGAATCGGCTTCATGTGCAACTGTGTGCTTCCTGCGACTATAAACGCGACCAGGTTTG 751 Query 696 GAAACAACAGAATCAACCAAGAAAAATCATGTGAAGCAGAATCTGAGAAGAAGAAACTGA 755 ||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||| Sbjct 752 GAAACAACAGAGTCAATCAAGACAAATCATGTGAAGCAGAAAATGAGAAGAAGAAACTGA 811 Query 756 CCAGTGTATCGAGCAGAGAGAGGTCTACTACGATTGCTACTCCTTCGTCGTCTTCTTCAT 815 | |||||||||||||||||||||||||| | |||||||||||||||||||||||||| | Sbjct 812 CGAGTGTATCGAGCAGAGAGAGGTCTAC--C-ATTGCTACTCCTTCGTCGTCTTCTTCGT 868 Query 816 CTCCTTCAGTTCAAGTCCGCGGTCGAAGCAGGAAAAGGCGTCCTCGTGCTCTGCAACCTT 875 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 869 CTCCTTCAGTTCAAGTTCGCGGTCGAAGCAGGAAAAGGCGTCCTCGTGCTCTGCAACCTT 928 Query 876 CATCGCCATTGACTCTCGGATCTTCCTCCGTTTGACTATAAATAAAAATGAAATTTGGCT 935 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 929 CATCGCCATTGACTCTCGGATCTTCCTCCGTTTGACTATAAGTAAAA-TGAAATTTGGCT 987 Query 936 TTCGTA-GTTAAATCCATTTTTGATCTCTCAATTAGAGAGACCACTCTGTTTTTCCTTCT 994 || || | ||||||||||||||||||||||| ||||||||||||||||| |||| |||| Sbjct 988 TT-GTTTGGTAAATCCATTTTTGATCTCTCAACTAGAGAGACCACTCTGTATTTC-TTCT 1045 Query 995 CTTAATTGCGAGTGTGCTTTGTAATCTTGTTAATATGCAAACcttcttcttttctttct- 1053 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct 1046 ATTAATTGCGAGTGTGCTCTGTAATCTTGTTAATATGCAAACCTTTTTCTTTTCTTTTTT 1105 Query 1054 --gtaattttatttacattttcgtttcagattttggacattatttttaCAGTCATATATC 1111 ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 1106 TTGTAATCTTATTTGCATTTTCTTTTCAGATTTTGGACTTTATTTTTACAGTCAGATATC 1165 Query 1112 AAATTCTCG 1120 ||||||||| Sbjct 1166 AAATTCTCG 1174 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54919396230 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5