BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477193
Length=1403
Score E
Sequences producing significant alignments: (Bits) Value
AT1G80560.1 | Symbols: ATIMD2, IMD2 | isopropylmalate dehydroge... 2204 0.0
AT5G14200.1 | Symbols: ATIMD1, IMD1 | isopropylmalate dehydroge... 1109 0.0
AT1G31180.1 | Symbols: ATIMD3, IMD3, IPMDH1 | isopropylmalate d... 1099 0.0
> AT1G80560.1 | Symbols: ATIMD2, IMD2 | isopropylmalate dehydrogenase
2 | chr1:30287763-30290298 FORWARD LENGTH=1460
Length=1460
Score = 2204 bits (1193), Expect = 0.0
Identities = 1337/1407 (95%), Gaps = 7/1407 (0%)
Strand=Plus/Plus
Query 1 AATCCTTTGTCCCTAAAATGGCGGCGGCTCTGCAGACGAATATCCGGCCGGTGAAGGTTC 60
|||||||| ||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct 54 AATCCTTTCTCCCTGAAATGGCGGCGGCTCTGCAGACGAATATCCGGACGGTCAAGGTTC 113
Query 61 CGGCAACGTTCAGAGCTGTCAA-CAAACAATCATTTGCACCCTTTAGAGCAAGATGCGCT 119
|||| |||||||||||||| || ||||| ||||| ||||||||||||| |||||| |||
Sbjct 114 CGGCTACGTTCAGAGCTGT-AAGTAAACAGTCATTGGCACCCTTTAGAGTAAGATGTGCT 172
Query 120 GTTGCATCCCCTGGaaaaaaaCGATACAACATCACTCTCCTTCCCGGTGACGGCATCGGT 179
||||| |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct 173 GTTGCTTCCCCTGGTAAAAAACGATACACCATCACTCTCCTTCCCGGAGACGGCATCGGT 232
Query 180 CCGGAGGTTGTCTCTATTGCCAAAAATGTGCTTCAGCAAGCTGGATCCTTGGAAGGAGTG 239
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 233 CCGGAGGTTGTCTCCATTGCCAAAAATGTGCTTCAGCAAGCTGGATCTTTGGAAGGAGTG 292
Query 240 GAATTTAGCTTCCGCGAGATGCCAATAGGTGGAGCTGCTTTGGATTTGGTCGGAGTTCCC 299
||||||| |||||| |||||||| || || |||||||||||||||||||||||||| |||
Sbjct 293 GAATTTAACTTCCGTGAGATGCCCATTGGAGGAGCTGCTTTGGATTTGGTCGGAGTGCCC 352
Query 300 TTGCCGGAGGAGACCATCGCAGCTGCTACAGAATCAGATGCACTGCTTCTTGGAGCCATT 359
|||||||||||||| ||| ||||||| | ||||||||||||| |||||||||||||||||
Sbjct 353 TTGCCGGAGGAGACTATCTCAGCTGCAAAAGAATCAGATGCAGTGCTTCTTGGAGCCATT 412
Query 360 GGAGGGTACAAGTGGGATAACAATGAAAAACATCTGAGGCCTGAGACGGGGTTACTTCAG 419
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 413 GGAGGGTACAAATGGGATAACAATGAAAAACATCTGAGGCCTGAGAAGGGGTTACTTCAG 472
Query 420 ATTCGTGCCGCTCTCAAAGTCTTTGCAAATCTGAGACCTGCTACAGTTCTCCCACAGTTA 479
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 473 ATTCGTGCAGCTCTCAAAGTCTTTGCAAATCTGAGACCTGCTACAGTCCTCCCACAGTTA 532
Query 480 GTGGATGCTTCCACCTTGAAGAGAGAAGTAGCAGAAGGTGTTGATCTAATGGTTGTAAGG 539
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 533 GTGGATGCTTCCACCTTAAAGAGAGAGGTAGCAGAAGGTGTTGATCTAATGGTTGTAAGG 592
Query 540 GAGCTTACAGGAGGTATTTACTTTGGAGAGCCAAGGGGCATAAAGACCAATGAAAATGGC 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGCTTACAGGAGGTATTTACTTTGGAGAGCCAAGGGGCATAAAGACCAATGAAAATGGC 652
Query 600 GAGGAAGTTGGGTTTAATACTGAGGTTTATGCTGCTCACGAGATTGATAGAATTGCTCGT 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 GAGGAAGTTGGGTTTAATACTGAGGTTTATGCTGCTCACGAGATTGATAGAATTGCTCGT 712
Query 660 GTTGCCTTTGAGACTGCTCGGAAACGGCGCGGCAAGCTGTGTTCTGTCGACAAAGCTAAT 719
|||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 713 GTTGCCTTCGAGACTGCTCGGAAACGGCGTGGCAAGCTGTGTTCTGTTGACAAAGCTAAT 772
Query 720 GTCTTGGACGCCTCAATCTTATGGAGAAAACGAGTGACAGCATTAGCCTCTGAATATCCT 779
|| ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 773 GTTTTGGAAGCCTCAATCTTATGGAGGAAACGAGTAACAGCATTAGCCTCTGAATATCCT 832
Query 780 GATGTTGAGCTGTCACATATGTATGTTGACAATGCCGCGATGCAGCTTGTCCGTGACCCA 839
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 833 GATGTTGAGCTGTCACATATGTATGTTGACAATGCCGCGATGCAGCTTGTTCGTGACCCA 892
Query 840 AAACAGTTTGACACCATCGTTACCAACAACATCTTTGGTGATATATTATCCGATGAAGCT 899
|||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||
Sbjct 893 AAACAGTTTGACACCATCGTCACAAACAACATTTTTGGTGATATATTATCCGATGAAGCT 952
Query 900 TCAATGATCACAGGAAGCATTGGAATGCTGCCATCTGCTAGTCTCAGTGATTCGGGACCT 959
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 953 TCAATGATCACAGGAAGCATAGGAATGCTGCCATCTGCTAGTCTCAGTGATTCGGGACCT 1012
Query 960 GGACTCTTTGAACCTATACATGGTTCTGCACCTGATATTGCTGGACAGGATAAGGCAAAC 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1013 GGACTCTTTGAACCTATACATGGTTCTGCACCTGATATTGCTGGACAGGATAAGGCAAAC 1072
Query 1020 CCATTGGCAACCATTCTCAGCGCTGCAATGCTTCTGAAATACGGACTTGGAGAAGAAAAG 1079
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 CCATTGGCAACCATTCTAAGCGCTGCAATGCTTCTGAAATACGGACTTGGAGAAGAAAAG 1132
Query 1080 GCAGCCAAGAGAATTGAAGACGCAGTGTTGGTTGCTCTGAACAACGGATTCAGAACTGGA 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1133 GCAGCCAAGAGAATTGAAGACGCAGTGTTGGTTGCTCTGAACAACGGATTCAGAACTGGA 1192
Query 1140 GATATTTACTCCGCAGGAACAAAACTGGTGGGCTGCAAGGAGATGGGAGAAGAGGTTCTG 1199
|| || |||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1193 GACATATACTCCGCGGGAACAAAACTGGTGGGCTGCAAGGAGATGGGAGAGGAGGTTCTG 1252
Query 1200 AAGTCAGTGGACTCCCAAGTTCCTGCTTCTGTTTAATATTTGTAGAAACTTTGAAGAGTT 1259
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1253 AAGTCAGTGGACTCCCAAGTTCCAGCTTCTGTTTAATATTTGTAGAAACTTTGAAGAGTT 1312
Query 1260 CATTTCCAACAATAAATGTTGTACGCAAAG-AC-CAAAGAGTATCGGTTTCATCAGCGAA 1317
|||||||||||| ||||||||||| | | || |||||||| ||||||| || |||||
Sbjct 1313 CATTTCCAACAACAAATGTTGTAC-CTT-GTACTCAAAGAGTCTCGGTTTTATTAGCGAT 1370
Query 1318 TTTTAAAATGTGAAATTATTAGAGGGACTTATTTGATCGAACTGAAACGTTGGTGTTTTT 1377
||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1371 TTTTATAATGTGAGATTATTAGAGGGACTTATTTGATCGAACTGAAACGTTGATGTTTTT 1430
Query 1378 T-CTGAAAAACAAATATCCTTGTGGAG 1403
| |||| ||| ||||||||||||||||
Sbjct 1431 TTCTGAGAAATAAATATCCTTGTGGAG 1457
> AT5G14200.1 | Symbols: ATIMD1, IMD1 | isopropylmalate dehydrogenase
1 | chr5:4576202-4578402 FORWARD LENGTH=1539
Length=1539
Score = 1109 bits (600), Expect = 0.0
Identities = 949/1118 (85%), Gaps = 22/1118 (2%)
Strand=Plus/Plus
Query 129 CCTGGaaaaaaaCGATACAACATCACTCTCCTTCCCGGTGACGGCATCGGTCCGGAGGTT 188
||||| |||||||| || |||||| |||| |||||||| ||||| |||||||| || |||
Sbjct 142 CCTGGGAAAAAACGGTATAACATCGCTCTGCTTCCCGGAGACGGTATCGGTCCAGAAGTT 201
Query 189 GTCTCTATTGCCAAAAATGTGCTTCAGCAAGCTGGATCCT-TGGAAGGAGTGGAATTTAG 247
||||| |||| || |||||||||||| ||||||||| || | |||||| |||| ||| |
Sbjct 202 ATCTCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGAT-CTCTCGAAGGACTGGAGTTT-G 259
Query 248 -CTTC-CGCGAGATGCCAATAGGTGGAGCTGCTTTGGATTTGGTCGGAGTTCCCTTGCCG 305
||| | |||||||| | || ||||| || ||||||||||| |||||||| ||||||
Sbjct 260 ATTTCAAG-GAGATGCCTGTCGGAGGAGCAGCCTTGGATTTGGTTGGAGTTCCATTGCCG 318
Query 306 GAGGAGACCATCGCAGCTGCTACAGAATCAGATG-CACTGCTTCTTGGAGCCATTGGAGG 364
||||| || || | ||||| | | ||| |||| || | ||||||||||| ||||||||
Sbjct 319 GAGGAAACTTTCACGGCTGCAAAACTATCTGATGCCA-TTCTTCTTGGAGCTATTGGAGG 377
Query 365 GTACAAGTGGGATAACAATGAAAAACATCTGAGGCCTGAGACGGGGT-TACTTCAGATTC 423
|||||| ||||| || ||||| ||||||||||| ||||||| || | | || | ||
Sbjct 378 GTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAGA-TGGCTCTGTTTTACCTTA 436
Query 424 G-TGCCGCTCTCAAAGTCTTTGCAAATCTGAGACCTGCTACAGTTCTCCCACAGTTAGTG 482
| | | ||||||||||||||| ||| ||||||||||||||||| | |||||| ||||
Sbjct 437 GAAG-AGATCTCAAAGTCTTTGCTAATTTGAGACCTGCTACAGTTTTGCCACAGCTAGTT 495
Query 483 GATGCTTCCAC-CTTGAAGAGAGAAGTAGCAGAAGGTGTTGATCTAATGGTTGTAAGGGA 541
||||||||||| | |||||| |||||||||||||||||||||| | ||| |||| |||||
Sbjct 496 GATGCTTCCACAC-TGAAGAAAGAAGTAGCAGAAGGTGTTGATATGATGATTGTTAGGGA 554
Query 542 GCTTACAGGAGGTATTTACTTTGGAGAGCCAAGGGGCATAAAGACCAATGAAAATGGCGA 601
||| ||||||||||||||||||||||||||||| ||||| | || |||||||||||||||
Sbjct 555 GCTCACAGGAGGTATTTACTTTGGAGAGCCAAGAGGCATTACGATCAATGAAAATGGCGA 614
Query 602 GGAAGTTGG-GTTTAATACTGAGGTTTATGCTGCTCACGAGATTGATAGAATTGCTCGTG 660
||||| || | ||| ||| ||| | || ||||||||||||||||| |||||||||||||
Sbjct 615 AGAAGTCGGCG-TTAGTACAGAGATCTACGCTGCTCACGAGATTGACAGAATTGCTCGTG 673
Query 661 TTGCCTTTGAGACTGCTCGGAAACGGCGCGGCAAGCTGTGTTCTGTCGACAAAGCTAATG 720
| || || ||||||||| ||||| |||| ||||| || |||||||| |||||||| ||||
Sbjct 674 TAGCATTCGAGACTGCTAGGAAAAGGCGTGGCAAACTTTGTTCTGTTGACAAAGCCAATG 733
Query 721 TCTTGGACGCCTCAATCTTATGGA-GAAAACGAGTGACAGCATTAGCCTCTGAATATCCT 779
| ||||| || ||||| || |||| ||||| |||| ||||| |||||||||||||||||
Sbjct 734 TGTTGGATGCATCAATATTGTGGAGGAAAA-GAGTAACAGCTTTAGCCTCTGAATATCCA 792
Query 780 GATGTTGAGCTGTCACATATGTATGTTGACAATGCCGCGATGCAGCTTGTCCGTGACCCA 839
|||||||| || |||||||||||||| || ||||| || ||||||||| | ||||||||
Sbjct 793 GATGTTGAACTATCACATATGTATGTCGATAATGCTGCAATGCAGCTTATTCGTGACCCG 852
Query 840 AAACAGTTTGACACCATCGTTACCAACAACATCTTTGGTGATATATTATCCGATGAAGCT 899
|||||||||||||| ||||||||||| ||||| |||||||||||||| || |||||||||
Sbjct 853 AAACAGTTTGACACAATCGTTACCAATAACATTTTTGGTGATATATTGTCTGATGAAGCT 912
Query 900 TCAATGATCACAGGAAGCATTGGAATGCTGCCATCTGCTAGTCTCAGTGATTCGGGACCT 959
||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||
Sbjct 913 TCAATGATCACTGGAAGCATTGGAATGCTTCCATCTGCTAGTCTCGGTGAATCGGGACCT 972
Query 960 GGACTCTTTGAACCTATACATGGTTCTGCACCTGATATTGCTGGACAGGATAAGGCAAAC 1019
|||||||||||||||||||||||||| ||||| ||||| |||||||| || |||||||||
Sbjct 973 GGACTCTTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACAAGACAAGGCAAAC 1032
Query 1020 CCATTGGCAACCATTCTCAGCGCTGCAATGCTTCTGAAATACGGACTTGGAGAAGAAAAG 1079
|||||||| |||||||||||||| || ||||||||||| || ||||||||||||||||||
Sbjct 1033 CCATTGGCCACCATTCTCAGCGCGGCGATGCTTCTGAAGTATGGACTTGGAGAAGAAAAG 1092
Query 1080 GCAGCCAAGAGAATTGAAGACGCAGT-GTTGGTTGCTCTGAACAACGGATTCAGAACTGG 1138
|| || ||||| ||||||||||| || || || |||||||||||| || |||||||| ||
Sbjct 1093 GCTGCAAAGAGGATTGAAGACGCTGTCGT-GGATGCTCTGAACAAAGGGTTCAGAACCGG 1151
Query 1139 AGATATTTACTCCGCAGGAACA-AAACTGGTGGGCTGCAAGGAGATGGGAGAAGAGGTTC 1197
||| || |||||| | |||| | ||||||||||| |||||||| ||||| || |||||||
Sbjct 1152 AGACATCTACTCCCCTGGAA-ATAAACTGGTGGGATGCAAGGAAATGGGTGAGGAGGTTC 1210
Query 1198 TGAAGTCAGTGGACTCCCAAGTTCCTGCTTCTGTTTAA 1235
| || |||||||| ||| ||||||| ||| ||||||||
Sbjct 1211 TCAAATCAGTGGAATCCAAAGTTCCAGCTACTGTTTAA 1248
> AT1G31180.1 | Symbols: ATIMD3, IMD3, IPMDH1 | isopropylmalate
dehydrogenase 3 | chr1:11142714-11144633 REVERSE LENGTH=1360
Length=1360
Score = 1099 bits (595), Expect = 0.0
Identities = 937/1102 (85%), Gaps = 24/1102 (2%)
Strand=Plus/Plus
Query 135 aaaaaaCGATACAACATCACTCTCCTTCCCGGTGACGGCATCGGTCCGGAGGTTGTCTCT 194
|||||||| || ||||||||||| |||||||| || || |||||||| || ||| | |||
Sbjct 137 AAAAAACGGTATAACATCACTCTGCTTCCCGGCGATGGTATCGGTCCAGAAGTTATATCT 196
Query 195 ATTGCCAAAAATGTGCTTCAGCAAGCTGGA-TCCTTGGAAGGAGTGGAATTTAG-CTTCC 252
|||| || |||||||||||| |||||||| | | | ||||| | || ||| | ||||
Sbjct 197 GTTGCTAAGAATGTGCTTCAGAAAGCTGGATTTC-TCCAAGGACTAGAGTTT-GATTTCC 254
Query 253 -GCGAGATGCCAATAGGTGGAGCTGCTTTGGATTTGGTCGGAGTTCCCTTGCCGGAGGAG 311
| |||||||| | || ||||| ||||||||||||||||||||||| |||||||||||
Sbjct 255 AG-GAGATGCCTTTCGGCGGAGCAGCTTTGGATTTGGTCGGAGTTCCATTGCCGGAGGA- 312
Query 312 ACCAT-CGCAGCTGCTACAGAATCAGATG-CACTGCTTCTTGGAGCCATTGGAGGGTACA 369
| | | | | ||||||| | | || |||| || | ||||||||||| || ||||||||||
Sbjct 313 AACTTCCACTGCTGCTAAACAGTCTGATGCCA-TTCTTCTTGGAGCTATCGGAGGGTACA 371
Query 370 AGTGGGATAACAATGAAAAACATCTGAGGCCTGAGACGGGGT-TACTTCAGATTCG-TGC 427
| ||||| || ||||| ||||||||||| ||||||| |||| | ||| | ||||| |
Sbjct 372 AATGGGACAAGAATGAGAAACATCTGAGACCTGAGA-TGGGTCTGCTTAACATTCGAAG- 429
Query 428 CGCTCTCAAAGTCTTTGCAAATCTGAGACCTGCTACAGTTCTCCCACAGTTAGTGGATGC 487
| |||||| |||||||| ||| ||||||||||||||||| | |||||| |||| |||||
Sbjct 430 AGATCTCAATGTCTTTGCTAATTTGAGACCTGCTACAGTTTTACCACAGCTAGTTGATGC 489
Query 488 TTCCAC-CTTGAAGAGAGAAGTAGCAGAAGGTGTTGATCTAATGGTTGTAAGGGAGCTTA 546
|||||| | |||||| |||||||||| ||||||||||| | ||| ||||||||||||| |
Sbjct 490 TTCCACAC-TGAAGAAAGAAGTAGCACAAGGTGTTGATATGATGATTGTAAGGGAGCTCA 548
Query 547 CAGGAGGTATTTACTTTGGAGAGCCAAGGGGCATAAAGACCAATGAAAATGGCGAGGAAG 606
| |||||||||||||||||||||||||| ||||| | || ||| ||||||||||| ||||
Sbjct 549 CTGGAGGTATTTACTTTGGAGAGCCAAGAGGCATTACGATCAACGAAAATGGCGAAGAAG 608
Query 607 TTGGGTTTAATACTGAGGTTTATGCTGCTCACGAGATTGATAGAATTGCTCGTGTTGCCT 666
| || |||||||| ||| | || ||||||||||||||||| ||||||||||||||||| |
Sbjct 609 TCGGTTTTAATACAGAGATCTACGCTGCTCACGAGATTGACAGAATTGCTCGTGTTGCAT 668
Query 667 TTGAGACTGCTCGGAAACGGCGCGGCAAGCTGTGTTCTGTCGACAAAGCTAATGTCTTGG 726
| ||||||||| ||||| |||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 669 TCGAGACTGCTAGGAAAAGGCGTGGCAAGCTGTGTTCTGTTGACAAAGCCAATGTCTTGG 728
Query 727 ACGCCTCAATCTTATGGA-GAAAACGAGTGACAGCATTAGCCTCTGAATATCCTGATGTT 785
| || ||||| || |||| ||||| |||| ||||| ||||||||||||||||| ||||||
Sbjct 729 ATGCATCAATATTGTGGAGGAAAA-GAGTAACAGCTTTAGCCTCTGAATATCCAGATGTT 787
Query 786 GAGCTGTCACATATGTATGTTGACAATGCCGCGATGCAGCTTGTCCGTGACCCAAAACAG 845
|| || |||||||||||||| || ||||| ||||||||||||||||||||||| ||||||
Sbjct 788 GAACTATCACATATGTATGTCGATAATGCTGCGATGCAGCTTGTCCGTGACCCGAAACAG 847
Query 846 TTTGACACCATCGTTACCAACAACATCTTTGGTGATATATTATCCGATGAAGCTTCAATG 905
|||||||| ||||| ||||| ||||| |||||||||||||| || |||||||||||||||
Sbjct 848 TTTGACACAATCGTCACCAATAACATTTTTGGTGATATATTGTCTGATGAAGCTTCAATG 907
Query 906 ATCACAGGAAGCATTGGAATGCTGCCATCTGCTAGTCTCAGTGATTCGGGACCTGGACTC 965
||||| || |||||||| ||||| |||||||| ||||| |||| |||||||||||||||
Sbjct 908 ATCACTGGTAGCATTGGGATGCTTCCATCTGCAAGTCTTGGTGAATCGGGACCTGGACTC 967
Query 966 TTTGAACCTATACATGGTTCTGCACCTGATATTGCTGGACAGGATAAGGCAAACCCATTG 1025
|||||||||||||||||||| ||||| ||||| |||||||| || |||||||||||||||
Sbjct 968 TTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACAAGACAAGGCAAACCCATTG 1027
Query 1026 GCAACCATTCTCAGCGCTGCAATGCTTCTGAAATACGGACTTGGAGAAGAAAAGGCAGCC 1085
|| ||||||||||| || || |||||||| || || |||||||||||||||||||| ||
Sbjct 1028 GCCACCATTCTCAGTGCGGCGATGCTTCTCAAGTATGGACTTGGAGAAGAAAAGGCTGCA 1087
Query 1086 AAGA-GAATTGAAGACGCAGT-GTTGGTTGCTCTGAACAACGGATTCAGAACTGGAGATA 1143
|||| || |||||||||| || || || |||||||||||| || |||||||| ||||| |
Sbjct 1088 AAGATGA-TTGAAGACGCGGTCGT-GGATGCTCTGAACAAAGGTTTCAGAACCGGAGACA 1145
Query 1144 TTTACTCCGCAGGAACA-AAACTGGTGGGCTGCAAGGAGATGGGAGAAGAGGTTCTGAAG 1202
| |||||| | |||| | ||||||||||| |||||||| ||||| || |||||||| ||
Sbjct 1146 TCTACTCCCCCGGAA-ATAAACTGGTGGGATGCAAGGAAATGGGTGAGGAGGTTCTCAAA 1204
Query 1203 TCAGTGGACTCCCAAGTTCCTG 1224
|||||||||||| |||||||||
Sbjct 1205 TCAGTGGACTCCAAAGTTCCTG 1226
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69126150465
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5