BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477265
Length=2209
Score E
Sequences producing significant alignments: (Bits) Value
AT1G79940.1 | Symbols: ATERDJ2A | DnaJ / Sec63 Brl domains-cont... 3496 0.0
AT4G21180.1 | Symbols: ATERDJ2B | DnaJ / Sec63 Brl domains-cont... 1443 0.0
> AT1G79940.1 | Symbols: ATERDJ2A | DnaJ / Sec63 Brl domains-containing
protein | chr1:30069550-30073332 FORWARD LENGTH=2313
Length=2313
Score = 3496 bits (1893), Expect = 0.0
Identities = 2118/2222 (95%), Gaps = 33/2222 (1%)
Strand=Plus/Plus
Query 1 AAGGaaaaaaaaCTGCAACGCCGTTTGTTGCCGATCTGCAGCAGCGCGATCTCTCTGTTT 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 41 AAGAAAAAAAAACTGCAACGCCGTTTGTTGCCGATCTGCAGCAGCGCGATCTCTCTGATT 100
Query 61 CTCTCCA-CTTTTCCTTTCT-GCAGAATCGAATCTCTCA---T-----CT-AAAAGATGG 109
| | | | | | | || ||||||| |||||||||| | || ||||||||
Sbjct 101 ATAGAGAGC-TAT-CATCCTAGCAGAATAGAATCTCTCAGTTTAAAGGCTCCAAAGATGG 158
Query 110 CGGCTTCAGAAGAGAATAGCGCATTGTTTCCCATTTTTATCTTGACGATTATGGCAATTC 169
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 159 CGGCGTCAGAAGAGAATAGCGCATTGTTTCCCATTTTTATCTTGACGATTATGGCAATTC 218
Query 170 CTTTGGTGCCTTATACCATGGTCAAGTTAACCGGTGCTCTCTCCAAGAAACAAAGGACCA 229
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 219 CTTTGGTGCCTTACACCATGGTCAAGTTAAGCGGTGCTCTCTCCAAGAAACAAAGGACCA 278
Query 230 TTCACTGTCAGTGTCTCGAGTGTGACCGTTCTGGCAAATATAAGAGATCCTTGTTTAAAA 289
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 279 TTCATTGTCAGTGTCTCGAGTGTGACCGTTCTGGAAAATATAAGAGATCCTTGTTTAAAA 338
Query 290 AGATCTCTAACTTCTCTACATGGAGCAACTTGACGCTTGTGCTACTCTGGGTCGTGATGG 349
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 339 AGATCTCTAACTTCTCTACGTGGAGCAACTTGACACTTGTGCTACTCTGGGTCGTGATGA 398
Query 350 TTTTCTTGATTTATTACACTAAGAACATGAGCCGTGAGGCTCAAGTTTTTGACCCATTCA 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 399 TTTTCTTGATTTATTACACTAAGAACATGAGCCGTGAGGCTCAAGTTTTTGACCCATTCA 458
Query 410 GTATACTTGGACTGGAACCTGGAGTTACAGATTCAGAAATTAAGAAAGCATATAGAAGGC 469
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 459 GTATACTTGGACTGGAACCTGGAGTTACAGATTCAGAAATAAAGAAAGCATATAGAAGGC 518
Query 470 TGTCCATTCAATACCATCCTGATAAAAATCCAGATCCAGAGGCCAATCAATATTTCGTGG 529
|||| ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||
Sbjct 519 TGTCGATTCAATACCATCCTGATAAAAATCCAGATCCAGAAGCCAATAAATATTTTGTGG 578
Query 530 AGTTCATTTCTAAAGCCTACCAGGCTTTGACTGATCCTGTATCCCGTGAAAACTTTGAGA 589
||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||||
Sbjct 579 AGTTCATATCTAAAGCATACCAGGCTTTGACTGATTCAGTATCCCGTGAAAACTTTGAGA 638
Query 590 AGTATGGTCATCCAGATGGCAGACAGGGATTCCAAATGGGCATTGCTCTTCCTCAATTTC 649
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 639 AGTATGGTCATCCAGATGGCAGACAGGGATTTCAAATGGGCATTGCTCTTCCTCAATTTC 698
Query 650 TTTTAGACATTGATGGAGCATCTGGTGGCATATTATTGCTTTGGATAGTTGGTGTCTGTA 709
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 699 TTCTAGACATTGATGGAGCATCTGGTGGCATATTATTGCTTTGGATAGTTGGTGTCTGTA 758
Query 710 TTCTCTTGCCCCTTGTGATTGCTGTTATATATCTCTCGAGGTCATCAAAGTATACCGGCA 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 759 TTCTCTTGCCCCTTGTGATTGCTGTTATATATCTCTCGAGGTCATCAAAGTATACTGGGA 818
Query 770 ACTACGTTATGCATCAAACACTCTCCGCATATTATTATCTAATGAAACCCTCTTTGGCCC 829
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 819 ACTACGTTATGCATCAAACACTCTCCGCATATTATTATCTAATGAAACCCTCTCTGGCCC 878
Query 830 CAAGCAAAGTTATGGAAGTTTTCACCAAGGCAGCTGAGTACATGGAGATTCCAGTTCGTA 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 879 CAAGCAAAGTTATGGAAGTTTTCACCAAGGCAGCTGAGTACATGGAGATTCCAGTTCGTA 938
Query 890 GAACTGATGATGAACCTCTGCAGAAGCTCTTTATGTCTGTTAGGAGTGAGCTAAACTTGG 949
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 939 GAACTGATGATGAACCTCTGCAGAAGCTCTTTATGTCTGTTAGGAGTGAACTAAATTTGG 998
Query 950 ACCTGAAGAACATGAAGCAAGAGCAAGCTAAGTTTTGGAAACAGCATCCTGCCATAGTGA 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 999 ACCTGAAGAACATGAAGCAAGAGCAAGCTAAGTTTTGGAAACAGCATCCTGCCATAGTGA 1058
Query 1010 AGACGGAGCTGTTGATACAGGCCCAGTTAACTCGTGAATCAGGAGTCCTGTCTCCCGCCC 1069
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1059 AGACCGAGCTGTTGATACAAGCCCAGTTAACTCGTGAATCAGGAGTCCTGTCTCCAGCCC 1118
Query 1070 TTCAGGGTGATTTCAGGCGTGTGCTAGAGCTTGCACCTCGCCTCCTTGAGGAGTTATTGA 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1119 TTCAGGGTGATTTCAGGCGTGTGCTAGAGCTTGCACCTCGCCTCCTTGAGGAGTTATTGA 1178
Query 1130 AGATGGCGGTTATACCGCGCACTGCCCAAGGGCATGGATGGCTGAGACCTGCAGTTGGAG 1189
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1179 AGATGGCGGTTATACCACGCACTGCCCAAGGGCATGGATGGCTGAGGCCTGCAGTTGGAG 1238
Query 1190 TAGTTGAGCTATCTCAGTGCATTGTTCAGGCTGTTCCTCTTAGTGCAAGGAAGTCTTCTG 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1239 TAGTTGAGCTATCTCAGTGCATTGTTCAGGCTGTTCCTCTTAGTGCAAGGAAGTCTTCTG 1298
Query 1250 GAGTATCTTCAGAAGGCATTTCCCCTTTCTTACAGCTCCCTCATTTCAGTGATGCCGTTG 1309
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 GAGTATCATCAGAAGGCATTTCCCCTTTCTTACAGCTCCCTCATTTCAGTGATGCCGTTG 1358
Query 1310 TCAAAAAGATAGCACGGAAGAAGGTTAAATCATTCCAAGATCTTCAAGAAATGAGGTTGG 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1359 TCAAAAAGATAGCACGGAAGAAGGTTAAATCATTCCAAGATCTTCAAGAAATGAGGTTGG 1418
Query 1370 AAGACCGTTCTGAACTGCTCACCCAGGTAGCGGGTTTATCAGCAACTGATGTTGAGGACA 1429
|||||||||||||||| || || |||||||||||||||||||||||||||||||||||||
Sbjct 1419 AAGACCGTTCTGAACTACTTACTCAGGTAGCGGGTTTATCAGCAACTGATGTTGAGGACA 1478
Query 1430 TTGAGAAGGTGCTAGAAATGATGCCGTCTCTTACAGTCGACATCACATGTGAAACAGAAG 1489
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1479 TTGAGAAGGTGCTAGAAATGATGCCGTCTATTACAGTCGACATCACATGTGAAACAGAAG 1538
Query 1490 GGGAAGAGGGGATCCAAGAGGGTGACATCGTGACCCTTCAAGCTTGGGTCACTCTGAAAC 1549
|||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct 1539 GGGAAGAGGGGATCCAAGAGGGAGACATTGTGACCCTTCAAGCTTGGGTCACCCTGAAAC 1598
Query 1550 GACCCAATGGGCTCATAGGCGCCCTTCCTCATGCACCCTACTTCCCTTTCCACAAGGAGG 1609
||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1599 GACCCAATGGGCTTGTAGGCGCTCTTCCTCATGCACCCTACTTCCCCTTCCACAAGGAGG 1658
Query 1610 AAAACTACTGGGTTCTTCTTGCTGATTCGGTGTCGAACAACGTGTGGTTCTCTCAGAAGG 1669
||||||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||
Sbjct 1659 AAAACTATTGGGTTCTTCTGGCTGATTCAGTGTCGAACAACGTTTGGTTCTCTCAGAAGG 1718
Query 1670 TAAGCTTCATGGATGAAGGTGGAGCGATAACGGCTGCATCGAAAGCCATCAGTGAGTCAA 1729
| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1719 TTAGCTTCCTGGATGAAGGTGGAGCGATAACGGCTGCATCAAAAGCCATCAGTGAGTCAA 1778
Query 1730 TGGAAGGTTCAGGAGCAGGGGTGAAGGAAACAAACGATGCAGTGAGAGAAGCGATTGAGA 1789
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1779 TGGAAGGTTCGGGTGCAGGGGTGAAGGAAACAAACGATGCAGTGAGAGAAGCGATTGAGA 1838
Query 1790 AGGTTAAAGGCGGGTCAAGGCTGGTAATGGGTAAACTCCAAGCACCGGCAGAGGGAACAT 1849
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1839 AGGTTAAAGGAGGGTCAAGGCTGGTCATGGGTAAACTCCAAGCACCGGCAGAGGGAACAT 1898
Query 1850 ACAACTTGACTTGCTTGTGCCTGTGCGACACATGGATCGGGTGTGATAAAAAGCAAGCAC 1909
|||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1899 ACAACTTGACTTGCTTCTGCCTGTGTGACACATGGATCGGGTGTGACAAAAAGCAAGCAC 1958
Query 1910 TGAAAGTGAAAGTCCTGAAAAGAACCCGGGCAGGGACACGTGG-TATGGTTTCAGATGAG 1968
|||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||
Sbjct 1959 TGAAAGTGAAAGTCCTGAAAAGAACCAGGGCAGGGACACGTGGGT-TGGTTTCAGATGAG 2017
Query 1969 GGTGCGATTGCAGAAGAAGGTATGGAGGAGGAAGATGAGATTGAGGAGGAGGATTACGAT 2028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2018 GGTGCGATTGCAGAAGAAGGTATGGAGGAGGAAGATGAGATTGAGGAGGAGGATTACGAT 2077
Query 2029 GATGATTACGAAAGTGAGTACAGTGAAGATGAGGATGAGAAGA--GA---GG--G----- 2076
||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct 2078 GATGATTACGAAAGTGAGTACAGTGAAGATGAGGATGAGAAGAAAGATATGGATGAGAAG 2137
Query 2077 ------TCGAAGAAGGCCAATGGGAGTGTGAAACAGAAGAAAGAGTCGAGTTCTGAAGAG 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2138 AGAGGGTCGAAGAAGGCCAATGGGAGTGTGAAACAGAAGAAAGAGTCGAGTTCTGAAGAG 2197
Query 2131 TCGGGATCGGAGGAAGAGTGAAACAGAAAGGAGATTTTACACTGATAAACaaaaaaaaaa 2190
||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||
Sbjct 2198 TCGGGATCGGAGGAAGAGTGAAACAGAAATGAGATTTTACATTGATAAACAAAACAAAAA 2257
Query 2191 aT 2192
||
Sbjct 2258 AT 2259
> AT4G21180.1 | Symbols: ATERDJ2B | DnaJ / Sec63 Brl domains-containing
protein | chr4:11288913-11292389 FORWARD LENGTH=2335
Length=2335
Score = 1443 bits (781), Expect = 0.0
Identities = 1526/1876 (81%), Gaps = 90/1876 (5%)
Strand=Plus/Plus
Query 98 TCTAAAAGATGGCGGCTTCAGAAGAGAATAGCGCATTGTTTCCCATTTTTATCTTGACGA 157
||||||||||||| | |||||||||||||||| |||||||||||||| || ||||| |
Sbjct 132 TCTAAAAGATGGCAGAATCAGAAGAGAATAGCGTTTTGTTTCCCATTTTCATTTTGACAA 191
Query 158 TTATGGCAATTCCTTTGGTGCCTTATACCA-TGGTCAAGTTAA-CCGGTGCTCTCTCCAA 215
| ||||||||||| ||||| ||||||| || | || ||| ||| || | ||| | || ||
Sbjct 192 TGATGGCAATTCCATTGGTTCCTTATA-CATTTGTGAAGCTAAGCC-GCGCTTTTTCTAA 249
Query 216 GAAACAAAGGACCATTCACTGTCAGTGTCTCGAGTGTGACCGTTCTGGCAAATATAAGAG 275
||||||| ||| || || ||||| ||||| |||||||| ||||| || || || |||||
Sbjct 250 GAAACAACGGAGTATACATTGTCAATGTCTTGAGTGTGATCGTTCAGGGAAGTACAAGAG 309
Query 276 ATCC-TTGTTTAAAAAG-ATCTCTAACTTCTCTACATGGAGCAACTTGAC-GCTTGTGCT 332
|||| || | | |||| ||||||| |||| || | || ||||||||||| | |||| ||
Sbjct 310 ATCCATT-TCT-CAAAGTATCTCTAGCTTCACTTCTTGTAGCAACTTGACAG-TTGTCCT 366
Query 333 ACTCTGGGTCGTGATGGTTTTCTTGATTTATTACACTAAGAACATGAGCCGTGAG-GCTC 391
||| ||| | || ||| | |||||||||||| | ||||||||||||||||||||| | ||
Sbjct 367 ACTTTGGATTGTAATGATCTTCTTGATTTATCATACTAAGAACATGAGCCGTGAGAG-TC 425
Query 392 AAGTTTTTGACCCATTCAGTATACTTGGACTGGAACCTGGAG-TTACAGATTCAGAAATT 450
|| | ||||| |||||| ||||||| || |||||||||| | || |||||||||||||
Sbjct 426 AACTCTTTGAGCCATTCGGTATACTCGGTTTGGAACCTGGTGCTT-CAGATTCAGAAATC 484
Query 451 AAGAAAGCATATAGAAGGCTGTCCATTCAATACCATCCTGATAAAAATCCAGATCCAGAG 510
||||||||||||||||| || || |||||||||||||||||||||||||| |||||||||
Sbjct 485 AAGAAAGCATATAGAAGACTCTCTATTCAATACCATCCTGATAAAAATCCTGATCCAGAG 544
Query 511 GCCAATCAATATTTCGTGGAGTTCATTTCTAAAGCCTACCAGGCTTTGACTGATCCTG-T 569
|||||| ||||||| ||||||| ||| ||||||| ||||| |||||||||||||| | |
Sbjct 545 GCCAATAAATATTTTGTGGAGTCCATAGCTAAAGCTTACCAAGCTTTGACTGATCC-GTT 603
Query 570 ATCCCGTGAAAACTTTGAGAAGTATGGTCATCCAGATGGCAGACAGGGATTCCA-AATGG 628
|||||| ||||||||||||||||| |||||||| ||||| |||||||| || | |||||
Sbjct 604 ATCCCGCGAAAACTTTGAGAAGTACGGTCATCCGGATGGTAGACAGGG-TTATACAATGG 662
Query 629 GCATTGCTCTTCCTCAATTTCTTTTAGACATTG-ATGGAGCATCTGGTGGCATATTATTG 687
| |||||||||||||||||| ||||| ||| || |||||| ||||||||| |||||||||
Sbjct 663 GAATTGCTCTTCCTCAATTTATTTTAAACA-TGAATGGAGAATCTGGTGGGATATTATTG 721
Query 688 CTT-TGGATAGTTGGTGTCTGTATTCTCTTGCCCCTTGTGATTGCTGT-TATATATCTCT 745
|| || | ||||||| | |||||||| ||||| || ||||| ||| | || |||||||
Sbjct 722 -TTGTGTACAGTTGGTTTATGTATTCTTTTGCCACTAGTGATCGCT-TCAATCTATCTCT 779
Query 746 CGAGGTCATCAAAGTATACCGGCAACT-ACGTTATGCATCAAACACTC-TC-CGCATATT 802
||| |||||||||||||| || || | |||||| || || || |||| || |||||||
Sbjct 780 GGAGATCATCAAAGTATACTGGGAA-TCACGTTAAGCTTC-AA-ACTCGTCAAGCATATT 836
Query 803 AT-TA-TCTAATGAAACCCTCTTTGGCCCCAAGCAAAGTTATGGA-AGTTTTCACCAAG- 858
| | | || || |||||||||| | ||||||||||||||||| | |||||| | ||
Sbjct 837 -TCGAGT-TATTGCAACCCTCTTTAACTCCAAGCAAAGTTATGGATA-TTTTCATC-AGA 892
Query 859 GCAGCTGAGTACATGGAGATTCCAGTTCGTAGAA-CTGATGATGAACCTCTGCAGAAGCT 917
|||||||| ||| |||||| ||||||||| || | ||||||||| |||||||||| ||
Sbjct 893 GCAGCTGAATACGCAGAGATTTCAGTTCGTA-AATCCGATGATGAATCTCTGCAGAAACT 951
Query 918 CTTTATGTCTGTTAGGAGTGAGCTAAACTTGGA-CCTGAAGAACATGAAGCAAGAGCAAG 976
|||||||||||| | || |||||||| ||||| ||| ||||| ||||||||||| |||
Sbjct 952 CTTTATGTCTGTCAAAAGCGAGCTAAATTTGGATCCT-AAGAAGTTGAAGCAAGAGGAAG 1010
Query 977 CTAAGTTTTGGAAACAGCATCCTGCCA-TAGTGAAGACGGAGCTGTTGATACAGGCCCAG 1035
|||||||||||||| |||||||||| | || | ||||| ||||| ||||||||| |||
Sbjct 1011 CTAAGTTTTGGAAAAAGCATCCTGCAACTA-TCAAGACTGAGCTTTTGATACAGAAACAG 1069
Query 1036 TTAACTCGTGAATCAGGAGTCCTGTCTCCCG-CCCTTCAGGGTGATTTCAGGCGTGTGCT 1094
||||||||||||||| |||||||||| ||| | || || |||||||||||| ||||||
Sbjct 1070 TTAACTCGTGAATCATCAGTCCTGTCT-CCGACTCTGCAACGTGATTTCAGGCATGTGCT 1128
Query 1095 AGAGCTTGCACCTCGCCTCCTTGAGGAGTT-ATTGAAGATGGCGGTTATACCGCGCACTG 1153
|||| ||||||||||||| ||||| || || ||| |||||||| |||||||| |||| ||
Sbjct 1129 AGAGTTTGCACCTCGCCTGCTTGAAGATTTGATT-AAGATGGCCGTTATACCCCGCAATG 1187
Query 1154 CCCAAGGGCATGGATGGCTGA-GACCTGCAGTTGGAGTAGTTGAGCTATCTCAGTGCATT 1212
||||||| ||||||| | | | |||||| |||||||| | ||||||||||| ||||||
Sbjct 1188 AACAAGGGCGTGGATGG-TTACGTCCTGCACTTGGAGTAATGGAGCTATCTCAATGCATT 1246
Query 1213 GTTCAGGCTGTTCCTCTTAGTGCAAGGAAGTCTTCTGGAGTATCTTCAGAAGGCATTTCC 1272
|||||||||||||||||||||||||||||||| | | ||||||||| |||| |
Sbjct 1247 GTTCAGGCTGTTCCTCTTAGTGCAAGGAAGTC------A-T--CTTCAGAAGACATTGCT 1297
Query 1273 CCTTTCTTACAGCTCCCTCATTTCAGTGA-TGCCGTTGTCAAAAA-GATAGCACGGAAGA 1330
|||||||| || ||||||||||||| ||| | | | | | ||| |||||| | |
Sbjct 1298 CCTTTCTTGCAACTCCCTCATTTCAATGAAT-CTATCG-CTAAATCGATAGC--GTT-GC 1352
Query 1331 AGGTTAAATCATTCCAAGA-TCTTCAAGAAATGAGGTTGGAAGACCGTTCTGAACTGCTC 1389
||||||||||||||||| | | |||||||| |||| |||| ||| |||||| ||||||||
Sbjct 1353 AGGTTAAATCATTCCAAAAGT-TTCAAGAACTGAGCTTGGCAGAACGTTCTAAACTGCTC 1411
Query 1390 ACCCAGGTAGCGGGTTTATCAGCAACTGATGTTGAGGACATTGAGAAGGTGCTAGAAATG 1449
| |||| | | |||| |||| ||| |||||| | ||||| ||||| ||| ||||||||
Sbjct 1412 AGAGAGGTTGTGAGTTTGTCAGAAACCGATGTTCAAGACATCGAGAAAGTGTTAGAAATG 1471
Query 1450 ATGCCGTCTCTTACAGTCGACATCACATGTGAAACAGAAGGGGAAGAGGGGATCCAAGAG 1509
|| || ||||||| | || || |||| || |||||||||| ||||| || || |||||
Sbjct 1472 ATACCTTCTCTTAAAATCAACGTCACTTGCAAAACAGAAGGCGAAGAAGGCATTCAAGAA 1531
Query 1510 GGTGACATCGTGACCCTTCAAGCTTGGGTCACTCTGAAACGACCCAATGGGCTCATAGGC 1569
|| || || |||| ||||||||||| ||||||||||||| |||||||| |||||||||
Sbjct 1532 GGCGATATTATGACAGTTCAAGCTTGGATCACTCTGAAACGTCCCAATGGACTCATAGGC 1591
Query 1570 GCCCTTCCTCA-TGCACCCTACTTCCCTTTCCACAAGGAGGAAAACTACTGGGTTCTTCT 1628
|| ||||||| | |||| ||||| ||||||||||| |||||||||| |||||||||||
Sbjct 1592 GCTATTCCTCACT-CACCTTACTTTCCTTTCCACAAAGAGGAAAACTTTTGGGTTCTTCT 1650
Query 1629 TGCTGATTCGGTGTCGAACAACGTGTGGTTCTCTCAGAAGGT-AAGCTTCATGGATGAAG 1687
||| ||||| ||| | || ||||||| ||||||||| || |||||||||||||
Sbjct 1651 TGCGGATTCA------AACCATGTCTGGTTCTTTCAGAAGGTTAAA-TTCATGGATGAAG 1703
Query 1688 GTGGAGCGATAACGGCTGCATCGAAAGC-C-ATCAGTGAGTCAATGGAAGGTTCAGGAGC 1745
|||||| ||| | |||||||| ||| | | || | ||| |||||||| || ||||||
Sbjct 1704 CTGGAGCTATAGCCGCTGCATC-AAA-CACTATTACTGAAACAATGGAACCTTTAGGAGC 1761
Query 1746 AGGGGTGAAGGAAACAAACGATGCAGTGAGAGAAGC-GATTGAGAAGGTTAAAGGCGGGT 1804
| | || ||||||||||| |||||||| | |||||| | |||||||||||||| | ||||
Sbjct 1762 AAGCGTCAAGGAAACAAATGATGCAGTTAAAGAAGCTG-TTGAGAAGGTTAAAAGTGGGT 1820
Query 1805 CAAGGCTGGTAATGGGTAAACTCCAAGCACC-GGCAGAGGGAACATACAACTTGACTTGC 1863
|||| |||||||||| | |||| |||||| || ||| || || || ||||||||||||
Sbjct 1821 CAAGATTGGTAATGGGGAGACTCTTAGCACCTGG-AGAAGGTACTTATAACTTGACTTGC 1879
Query 1864 TTGTGCCTGTGCGACACATGGATCGGGTGTGATAAAAAG-CAAGCACTGAAAGT-GAAAG 1921
|| ||||| |||| || |||||||| ||||| ||||| || |||||||||| || |
Sbjct 1880 TTCTGCCTAAGCGATACTTGGATCGGTTGTGACCAAAAGACAT-CACTGAAAGTCGAG-G 1937
Query 1922 TCCTGAAAAGAACCCG 1937
| |||||||||||||
Sbjct 1938 TTTTGAAAAGAACCCG 1953
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109587789735
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5