BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477331 Length=1926 Score E Sequences producing significant alignments: (Bits) Value AT3G01840.1 | Symbols: | Protein kinase superfamily protein | ... 2833 0.0 AT3G01830.1 | Symbols: | Calcium-binding EF-hand family protei... 654 0.0 > AT3G01840.1 | Symbols: | Protein kinase superfamily protein | chr3:296582-298648 REVERSE LENGTH=1979 Length=1979 Score = 2833 bits (1534), Expect = 0.0 Identities = 1758/1867 (94%), Gaps = 11/1867 (1%) Strand=Plus/Plus Query 1 GACATGGCTATTTCAGTTAGTAAGCAGTTCaaaaaaaGTCTTGTAGTGATCTTGCTCTTC 60 ||||||||| |||||||||||||||||| || | ||||||||||||||||||||||||| Sbjct 12 GACATGGCTGTTTCAGTTAGTAAGCAGTACATGACAAGTCTTGTAGTGATCTTGCTCTTC 71 Query 61 ATCTCCTTATCATCGCTCTCTCCAACTTCAACTTCACACAGCTGTGACCCTGTACaagaa 120 |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||| Sbjct 72 ATCTCCTTATCATCTCTCTCTCCAACTTCAACTTCACACAGCTGTGACCCTGT-C--GAA 128 Query 121 gaagaagaagaagCCTCCTCCTTCGGTTACGTTTGCCACTCAAACCTTCAAAAGTGCCAC 180 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 129 GAAGAAGAAGAAGCCTCCTCCTTCGGTTACGTTTGCCACTCAAACCTCCAAAAGTGCCAC 188 Query 181 ACTTTCGCCATTCTCAGAGCCAAATCTCCTTTCAACTCCATCTCCAACCTGAGTTACCAT 240 |||||||||||||||||||||||| |||| ||| | ||| |||| |||||||| |||| Sbjct 189 ACTTTCGCCATTCTCAGAGCCAAACCTCCCTTCTATTCCCTCTCGGACCTGAGTCGCCAT 248 Query 241 CTAGGTCTAGACACAGAGGCAGACGAGTTTGTTCTGCAAGGTCAGTTACTGTTGATCCCA 300 || ||||| ||| |||| | ||||||| ||||| | ||||||||||||| ||||||||| Sbjct 249 CTTGGTCTCGACGCAGA--C-GACGAGTATGTTCCGAAAGGTCAGTTACTCTTGATCCCA 305 Query 301 GTTGAGTGCAGGTGTAATGGAAGCATCTACGAGGCCAATCTCATTAAAACTTGCGTTAAA 360 | |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 306 ATAGAGTGCAGGTGTAATGGAAGCATCTACGAGGCCAGTCTCATTAAAAATTGCGTTAAA 365 Query 361 GGAGACACCTTTCGCTCTGTCTCTCAGTCTCTGCAAGGCTTGACCTCGTGCCTATCTATC 420 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 366 GGAGACACCTTTCGCTCTGTCTCTCAGTCTCTGCAAGGCTTGACCACCTGCCTATCTATC 425 Query 421 AGAGAGAAAAACCCAGATATTTCCGAGGACAAGATTGGCGACAACGTTAAGCTGCGTTTG 480 |||||||| || ||| |||||||||| |||||| ||||||||||| |||| ||||||||| Sbjct 426 AGAGAGAAGAATCCACATATTTCCGAAGACAAGCTTGGCGACAACATTAAACTGCGTTTG 485 Query 481 GCGATCAGGTGCTCCTGTCCACAAGAAGGCGTTTCAAACACTAGTTTTCTTGTGACGTAT 540 |||||||||||||| |||||||||||||||||||||||| |||||||||| || |||||| Sbjct 486 GCGATCAGGTGCTCTTGTCCACAAGAAGGCGTTTCAAACGCTAGTTTTCTCGTTACGTAT 545 Query 541 CCGGTGGGAGTCCGCGACAGCGTTACAAGCCTGGCGGTTAGGTTCAACACAACAGAGGAT 600 |||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct 546 CCGGTGGGCGTCCGCGACAGCGTTTCAAGCCTGGCGGTTAGGTTTAACACAACAGAGGAT 605 Query 601 GCCATTGTCTCTGCAAACAACAAATCTGGTGTCGTTCCACTCAAGCCTGCTCTCATCCCT 660 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 606 GCCATTGTCTCTGCAAACAACAAATCTGGTGTGGTTCCACTCAAGCCTGCTCTCATCCCT 665 Query 661 CTTGATCACAAACCAGAGAAACCCGAGAATCGCCAGAAAAGAAAACCATCCAAGAAGAAA 720 ||||||||||||||||||||| | || ||| || ||||||||| ||||||||||||||| Sbjct 666 CTTGATCACAAACCAGAGAAA--CAAGGATC-CCGGAAAAGAAATCCATCCAAGAAGAAA 722 Query 721 CGGTCAAAGATGAAGCTCATGATCGCTGTGAGCAGCGCCATTGCTGGAGTTTTCGGTCTT 780 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 723 CGGTCAAAGATGAAGCTCATGATCGCTGTGAGCAGCGCGATTGCTGGAGTTTGCGGTCTT 782 Query 781 GTCACTCTCATGGTGTTTGGTTACTTACACTGGAAGAAAGAGACGCAGATGCAAACGCAA 840 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 783 GTCACTCTCATGGTGTTTGGTTACTTACACTGGAAGAAAGAGACGCAGATTCAAACGCAA 842 Query 841 ACGCAAAAGTGGATTAGCAACAAAGACCCCGAGACGCGGCAGCTGAGTCTAAGCATCCGA 900 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 843 ACGCAAAAGTGGATTAGCAACAAAGACCCCGAGACGCGGCAGCTGAGTCTGAGCATCCGA 902 Query 901 ACCACGAGTGACAAGAAAATCTCGTTTGAAGGGTCACAGGACGGTTCCATCTTGGATTCT 960 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 903 ACCACGAGTGACAAGAAAATCTCGTTTGAAGGGTCGCAGGACGGTTCCATCTTGGATTCT 962 Query 961 CACAACACTGTCGGCACCACAACGCCGCGAAAACCTGTTCTGGAGATGTACGCGTTTGAA 1020 |||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct 963 CACAACACCGTCGGCACCACAACGCCCCGAAAACCCGTTCTGGAGATTTACGCGTTTGAA 1022 Query 1021 GAGTTAGAGAAGGCCACTGAGAATTTCAGTTCAAGCAATCACATCAAAGGTTCGGTTTAT 1080 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1023 GAGTTAGAGAAGGCCACGGAGAATTTCAGTTCAAGCAATCACATCAAAGGTTCGGTTTAT 1082 Query 1081 TTCGGTTCGCTCAAAGGCAAAGACTTGGCTATAAAGCAAGTCAGTGCAGATGCAGTGAAA 1140 ||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||| Sbjct 1083 TTCGGTTCGCTCAAAGGCAAAGACTTGGCTATAAAGCAAGTCAATGCAGATGAAATGAAA 1142 Query 1141 AGGTTCGATTTCGGGCTTCTGAACGATCAGTCACACTACTATAACCACAATCTGATTAGG 1200 || ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct 1143 AGATTCGATTTCGGGCTTCTCAATGATCAGTCACACTACTATAACCACAATGTGATTAGG 1202 Query 1201 GTTCTTGGGACATGTTTTCCAGAAATCGATCAGGATTCTTATCTGGTTTTCGAGTATGCA 1260 |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 1203 GTTCTTGGAACATGTTTTAGAGAAATCGATCAAGATTCTTATCTGGTTTTCGAGTATGCA 1262 Query 1261 AGGAATGGGTCCCTGTGGGATTGGATTCAGAACAAATTGGCCATCAAGAATCAATTCATC 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1263 AGGAATGGGTCCCTGTGGGATTGGATTCAGAACAAATTGGCCATCAAGAATCAATTCATC 1322 Query 1321 GAGTCTTGTTACTGTTTCTTGGCATGGAAACAGAGGATCAAGATATGTCACGACGTCGCC 1380 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1323 GAGTCTTGTTACTGTTTCTTGGCATGGAAACAGAGGATCAAGATATGTCACGATGTCGCC 1382 Query 1381 ATCGCGTTAAAGTATATGCATCGGATCAACTATGTCCACGGCAACATCAAGAGCAGGAAC 1440 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 1383 ATCGCGTTAAAGTATATGCATCGGATCAACTACGTCCACGGCAACATCAAGAGCAGAAAC 1442 Query 1441 ATCTTCTTGAACGAAGATCTCAGAGGTAAAGTCGGAAACTTTGGGATGTCAAAGTGCTTA 1500 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1443 ATCTTCTTGAACGAAGATCTCAGAGGTAAAGTCGGAAACTTTGGGATGTCAAAGTGCGTA 1502 Query 1501 ACCAACGAATTAGCGACGGAAGAGAACCTTATAGA-AGGTTCCCTGTCTCCAGCTTCTGA 1559 ||||| |||||||| || ||||||||||||||||| || ||| ||||||||||||||||| Sbjct 1503 ACCAATGAATTAGCCACAGAAGAGAACCTTATAGAGAG-TTCACTGTCTCCAGCTTCTGA 1561 Query 1560 CGTATTCGCTTATGGGATTATCGTAATGGAGGTTTTGTCTGGACAAACCCCAGAGATGTT 1619 | |||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 1562 CATATTTGCTTACGGGATAATCGTAATGGAGGTTTTGTCTGGACAAACCCCAGATATGTT 1621 Query 1620 GCTTGGATTGCAAGAACAAGAGACAACATCCCTTGGGATAGAAGAAACTTGTGTTTCCGA 1679 |||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||| Sbjct 1622 GCTTGGATTGCAAGAAGTAGAGACAACATCCCTTGGGACACAAGAAACTTTTGTTTCCGA 1681 Query 1680 ATGGAGCAGATTGAGAAGGGTTCTCGGGGACAAGGAAAAGCTGAGGGAAGTGATGGACAG 1739 |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1682 ATGGAGTAGATTAAGAAGGCTTCTCGGGGACAAGGAAAAGCTGAGGGAAGTGATGGACAG 1741 Query 1740 CACATTGGGGGAGAGCTATTCGCTTGATTCCGCATTTGAGCTCGCAAGTATTGCAAGAGA 1799 ||||||||| |||||||||||| ||||||| || ||||| ||||||||||||||||||| Sbjct 1742 CACATTGGGAGAGAGCTATTCGGTTGATTCTGCGTTTGAAATCGCAAGTATTGCAAGAGA 1801 Query 1800 TTGTACTGCAGAAGAAGCCGAGTCAAGGCCGAGCGCGGCTGAGATAGCAGAGAGGGTTTC 1859 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct 1802 TTGTACTGCAGAAGAAGCCGAGTCAAGGCCGAGCGCGGTTGAGATTGCAGAGAGGGTTTC 1861 Query 1860 AAGATTg 1866 ||||||| Sbjct 1862 AAGATTG 1868 Score = 106 bits (57), Expect = 9e-22 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 1867 agagagagagagTACCTTAATTTCAGAGAGTTCATACAAGCCTTTGGTAAAGAAGAGTAG 1926 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1907 AGATAGAGAGAGTACCTTAATTTCAGAGAGTTCATACAAGCCTTTGGTAAAGAAGAGTAG 1966 > AT3G01830.1 | Symbols: | Calcium-binding EF-hand family protein | chr3:296054-297133 FORWARD LENGTH=1080 Length=1080 Score = 654 bits (354), Expect = 0.0 Identities = 413/442 (93%), Gaps = 2/442 (0%) Strand=Plus/Minus Query 1426 ATCAAGAGCAGGAACATCTTCTTGAACGAAGATCTCAGAGGTAAAGTCGGAAACTTTGGG 1485 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1080 ATCAAGAGCAGAAACATCTTCTTGAACGAAGATCTCAGAGGTAAAGTCGGAAACTTTGGG 1021 Query 1486 ATGTCAAAGTGCTTAACCAACGAATTAGCGACGGAAGAGAACCTTATAGA-AGGTTCCCT 1544 |||||||||||| ||||||| |||||||| || ||||||||||||||||| || ||| || Sbjct 1020 ATGTCAAAGTGCGTAACCAATGAATTAGCCACAGAAGAGAACCTTATAGAGAG-TTCACT 962 Query 1545 GTCTCCAGCTTCTGACGTATTCGCTTATGGGATTATCGTAATGGAGGTTTTGTCTGGACA 1604 |||||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 961 GTCTCCAGCTTCTGACATATTTGCTTACGGGATAATCGTAATGGAGGTTTTGTCTGGACA 902 Query 1605 AACCCCAGAGATGTTGCTTGGATTGCAAGAACAAGAGACAACATCCCTTGGGATAGAAGA 1664 ||||||||| ||||||||||||||||||||| |||||||||||||||||||| | |||| Sbjct 901 AACCCCAGATATGTTGCTTGGATTGCAAGAAGTAGAGACAACATCCCTTGGGACACAAGA 842 Query 1665 AACTTGTGTTTCCGAATGGAGCAGATTGAGAAGGGTTCTCGGGGACAAGGAAAAGCTGAG 1724 ||||| ||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| Sbjct 841 AACTTTTGTTTCCGAATGGAGTAGATTAAGAAGGCTTCTCGGGGACAAGGAAAAGCTGAG 782 Query 1725 GGAAGTGATGGACAGCACATTGGGGGAGAGCTATTCGCTTGATTCCGCATTTGAGCTCGC 1784 |||||||||||||||||||||||| |||||||||||| ||||||| || ||||| |||| Sbjct 781 GGAAGTGATGGACAGCACATTGGGAGAGAGCTATTCGGTTGATTCTGCGTTTGAAATCGC 722 Query 1785 AAGTATTGCAAGAGATTGTACTGCAGAAGAAGCCGAGTCAAGGCCGAGCGCGGCTGAGAT 1844 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 721 AAGTATTGCAAGAGATTGTACTGCAGAAGAAGCCGAGTCAAGGCCGAGCGCGGTTGAGAT 662 Query 1845 AGCAGAGAGGGTTTCAAGATTg 1866 ||||||||||||||||||||| Sbjct 661 TGCAGAGAGGGTTTCAAGATTG 640 Score = 106 bits (57), Expect = 9e-22 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 1867 agagagagagagTACCTTAATTTCAGAGAGTTCATACAAGCCTTTGGTAAAGAAGAGTAG 1926 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AGATAGAGAGAGTACCTTAATTTCAGAGAGTTCATACAAGCCTTTGGTAAAGAAGAGTAG 542 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 95381035500 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5