BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477353 Length=1474 Score E Sequences producing significant alignments: (Bits) Value AT3G01620.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransfer... 2141 0.0 > AT3G01620.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransferase family protein | chr3:235197-236925 REVERSE LENGTH=1493 Length=1493 Score = 2141 bits (1159), Expect = 0.0 Identities = 1390/1498 (93%), Gaps = 29/1498 (2%) Strand=Plus/Plus Query 1 AAACGGCTATAATTGGCGTTATAGTTACGGTGAGAGGAGAAGGATCGATTTGAAGACAGA 60 ||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||| Sbjct 1 AAACGGCTATAATTGGCGTTACAGTTTTGGTGAAAGGAGAAGGATCGATTTCAAGACAGA 60 Query 61 AATTCTCGGATTTGATCCTCCTCCGAGACCTAGA-C-CTC-Ctc-t-ttcttgtttttct 115 |||||||||||||||||||||||||||| ||||| | ||| ||| | || || ||||||| Sbjct 61 AATTCTCGGATTTGATCCTCCTCCGAGAACTAGACCACTCTCTCTTGTTTTTCTTTTTCT 120 Query 116 ttagattttctgtttcttcataattttttttttttttCCGTTCAATATTTGACTTTCCTT 175 |||||||||||||| |||| || || ||||||| ||| ||| ||||||||||||| Sbjct 121 GTAGATTTTCTGTTTATTCA-AA-AACTTATTTTTTT-CGTCCAAAATTTGACTTTCCTG 177 Query 176 TG----AA-C--CA--ATCATGTCCGATGGTTATTGTAATTCTAAGAAGACTGATACTAT 226 | || | || |||||||||||||||||| ||| |||||||||||| |||||||| Sbjct 178 AGAACTAATCATCATCATCATGTCCGATGGTTATCGTAGTTCTAAGAAGACGGATACTAT 237 Query 227 CTGCGAACATGTTTGTGGACAGGAAGGTTCTCGAGCAGGCAAGGCCATGTCAAGGCTTAG 286 ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 238 CTGCGAAGATGTTTGTGGACAGGAAGGTTCTCGAGCAGGCAAGGCCATTTCAAGGCTTAG 297 Query 287 ATGTGTTCTAAGAGGACTCGATTTTGAAACTTTTCTGTTTCTCTTCACTCTCCTCCCAGT 346 |||||||||||||||||||||||| |||| || |||||||||||||||||||| ||| | Sbjct 298 ATGTGTTCTAAGAGGACTCGATTTCAAAACATTCCTGTTTCTCTTCACTCTCCTGCCACT 357 Query 347 CTTCATCTTCGGCATCTATCTACACGGCCAGAAGATTACATATTTCTTGAGACCTCTATG 406 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 358 CTTCATCTTCGGCATCTATCTACACGGCCAGAAGATCACATATTTCTTGAGACCTCTATG 417 Query 407 GGAATCACCTCCTAAACCTTTTAACATCCTTCCTCATTACTATCACGCCAACACTTCCAT 466 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 418 GGAATCACCTCCTAAACCTTTTAACATCCTTCCGCATTACTATCACGAGAACACTTCCAT 477 Query 467 GGAAATGCTCTGCAATCTTCATGGCTGGAAACTCCGTGAATCTCCAAGAAGAGTCTTTGA 526 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 478 GGAATTGCTCTGCAATCTTCATGGCTGGAAACTCCGCGAATCTCCAAGAAGAGTCTTTGA 537 Query 527 TGCTGTCTTGTTCAGTAACGAGATCGATATGCTCACTCTCCGTTGGAATGAGTTAAACCC 586 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 538 TGCTGCCTTGTTCAGTAACGAGATCGATATGCTCACTCTCCGTTGGAATGAGTTAAATCC 597 Query 587 CTACATTACTCAGTTTGTGCTTCTCGAATCTAACTCAACTTTCACCGGACTGTCAAAACC 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 TTACATTACTCAGTTTGTGCTTCTCGAATCTAACTCAACTTTCACCGGACTGTCAAAACA 657 Query 647 GTTGGCTTTCGCAGACAACCGGGAGAAGAATTTCCAATTTGCCGAGTCAAAACTGACTTA 706 ||||||||||||||||||| |||||||||||||| |||| | ||| ||| |||||||| Sbjct 658 GTTGGCTTTCGCAGACAACAGGGAGAAGAATTTCAAATTCGTTGAGCCAAGGCTGACTTA 717 Query 707 TGGGCACGTTGGAGGAAGGTTCAAGAAAGGCGAAAACCCCTTTGTGGAAGAATCATTCCA 766 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 718 TGGGAACGTTGGAGGAAGGTTCAAGAAAGGCGAAAACCCCTTTGTGGAGGAATCATTCCA 777 Query 767 AAGGCTTGCACTTGACCAACTGATCAAGCTCGCAGGTATAAAAGAAGATGATATTTTGAT 826 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 778 AAGGCTTGCACTTGACCAGTTGATCAAGCTCGCAGGTATAAAAGAAGATGATCTTTTGAT 837 Query 827 AATGTCGGATGTCGATGAGATCCCCAGCAGTCATACCATCAATCTGCTTAGATGGTGTGA 886 |||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| Sbjct 838 AATGTCGGATGTCGATGAGATCCCGAGCGGCCATACCATCAATCTGCTTAGATGGTGTGA 897 Query 887 CGGATTCCCACCCATCCTTCATCTTCAGTTGAGAAACTACCTCTACTCATATGAGTACTA 946 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 898 CGGGTTCCCACCGATCCTTCATCTTCAGTTGAGAAACTACCTCTACTCATATGAGTACTA 957 Query 947 TGTCGATAGCAAAAGCTGGAGAGCTTCGGTTCATCTCTACAAGCCTGGGAAAACTCGGTA 1006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 TGTCGATAGCAAAAGCTGGAGAGCTTCGGTTCATCTCTACAAGCCTGGGAAAACTCGGTG 1017 Query 1007 TGCTCATTTCCGGCAAAGCGACAATCTTTTGACAGATTCAGGTTGGCATTGCAGTTTTTG 1066 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct 1018 CGCTCATTTCCGGCAAAGCAACAATCTTTTGACAGATTCAGGTTGGCATTGCAGTTTCTG 1077 Query 1067 TTTCAGACACATCAATGATTTCGTATTCAAGATGAAAGCTTATAGCCATACCGACCGGGT 1126 |||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct 1078 TTTCAGACACATCAATGACTTCGTGTTCAAGATGAAAGCTTATAGCCATACTGACCGGGT 1137 Query 1127 CAGATTCTTACATTATCTGAACCCGAGACGAATCCAAGATGTTATCTGCAAAGGAACTGA 1186 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1138 TAGATTCTTACATTATCTGAACCCGAGACGAATCCAAGACATTATCTGCAAAGGAACTGA 1197 Query 1187 TCTTTTCGATATGCTTCCTGAAGAACACACATTCAGGGAGATTATCGGGAAACTTGGTCC 1246 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1198 TCTTTTCGATATGCTTCCTGAAGAACACACATTCAGGGAGATTATCGGCAAACTTGGTCC 1257 Query 1247 GATTCCACGGTCTTATTCAGCTGTTCATCTCCCTGGATACTTGATTCAGAATGCTAATAA 1306 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1258 GATTCCACGGTCTTATTCAGCTGTTCATCTCCCTGGATACTTGATTCAGAATGCTGATAG 1317 Query 1307 CTACAAGTACTTATTACCTGGGAACTGCAAACGAGAATTTGGCTGATAAATAAAGGACCT 1366 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1318 CTACAAGTACTTATTACCTGGGAACTGCAAACGAGAATCTGGCTGATAAATAAAGGACCT 1377 Query 1367 CTACTTATCACT---C---C--TCTA-TAGTCTTTAGCTTTT-GTTCTCTCTTTCTCTAT 1416 ||||||| |||| | | |||| | ||||||||||||| |||||| |||||||||| Sbjct 1378 CTACTTACCACTTATCAGTCCCTCTAGTTGTCTTTAGCTTTTTGTTCTCGCTTTCTCTAT 1437 Query 1417 ATCATCTCTGTGCATACAATTTTTACAGTCTCAGAATTTTTGTAGCATTACGGATCCG 1474 |||||||||| ||||||| || ||||| |||||||||||||||| ||||||||||| Sbjct 1438 CTCATCTCTGTACATACAACTT--ACAGTATCAGAATTTTTGTAGCGTTACGGATCCG 1493 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72690389160 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5