BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477431
Length=2453
Score E
Sequences producing significant alignments: (Bits) Value
AT3G01040.1 | Symbols: GAUT13 | galacturonosyltransferase 13 | ... 3738 0.0
AT5G15470.1 | Symbols: GAUT14 | galacturonosyltransferase 14 | ... 1916 0.0
> AT3G01040.1 | Symbols: GAUT13 | galacturonosyltransferase 13
| chr3:8957-12444 FORWARD LENGTH=2502
Length=2502
Score = 3738 bits (2024), Expect = 0.0
Identities = 2335/2474 (94%), Gaps = 66/2474 (3%)
Strand=Plus/Plus
Query 25 ttcttcttctcctctcatctttttt-tttGTCTGCTTCTTCTTTGACAAGCTCATTGCTT 83
||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||||
Sbjct 23 TTCTTCTTCTCCTCTCATCTTTTTTGTCT-TCTTCTTCTTCTTTGACAAGCTCATTGCTT 81
Query 84 TGTCTTTGATCCTGCCTGTAACACGAATTCGGAGGA-ATACCCGTTTCGATTCTCGTATC 142
||||||||||||||| |||| ||||||||||||||| | |||| ||||||||||||||||
Sbjct 82 TGTCTTTGATCCTGCTTGTATCACGAATTCGGAGGACA-ACCCATTTCGATTCTCGTATC 140
Query 143 GAATTGCTTAAATCAATCTACAAAGAGACGGCGGGAATCTCAAATTCGGAATTTTGCTGG 202
||||| | | | || | ||||||||||||||||||||||||||| ||||||||||||
Sbjct 141 GAATTTC-T---TGAA--T-CAAAGAGACGGCGGGAATCTCAAATTCAGAATTTTGCTGG 193
Query 203 -TTGTTGTAAATCCAAATGCGGTCTGAGAGAGGAAGATTACAAAGAATAAGAAGATCGAA 261
|||| ||||||||||||||||||||||||| | || |||||| ||||||||| ||||
Sbjct 194 GTTGTCGTAAATCCAAATGCGGTCTGAGAGA--A-GACTACAAATTATAAGAAGAGCGAA 250
Query 262 TCAGAGTCTAACATCATCGGATTTGGGAGCTAC-A-T----CGAGA-TCG----G-A--- 306
|| |||||||||||||||||||||||||||||| | | ||||| ||| | |
Sbjct 251 TCGGAGTCTAACATCATCGGATTTGGGAGCTACGACTAGATCGAGAATCGAAAAGCAATC 310
Query 307 ---GA-A--G-A-A-GA-G-G-AATCGCGTAGGGAGGTGATGTTGTTTGGTTGGGGATTG 354
|| | | | | || | | ||||||||||||||||||||||||||||||||||||||
Sbjct 311 ATCGAGATCGGAGAAGAAGAGGAATCGCGTAGGGAGGTGATGTTGTTTGGTTGGGGATTG 370
Query 355 GGTGGAATTAGGGTTTTATTCGATTCGATTGATCTGAATACAACAGTGGGGCTGCACGAA 414
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct 371 GGTGGAATTAGGGTTTTATTGGATTCGATTGATCTGAATACAACAGCGGGGCTGCACGAA 430
Query 415 CAAGGATGCAGCTTCACATATCGCCGAGCATGAGAAGCATTACGATATCGAGCAGCAATG 474
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 431 CAAGGATGCAGCTTCACATATCGCCTAGCATGAGAAGCATTACGATATCGAGCAGCAATG 490
Query 475 AGTTTATCGATTTGATGAAGATCAAAGTCGCAGCTCGTCACATTTCTTACCGAACTCTCT 534
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 491 AGTTTATTGATTTGATGAAGATCAAAGTCGCAGCTCGTCACATCTCTTACCGAACTCTCT 550
Query 535 TCCACACTATCTTAATCCTCGCTTTCTTGTTGCCTTTTGTCTTCATCCTAACCGCTGTTG 594
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 551 TCCACACTATCTTAATCCTCGCTTTCTTGTTACCTTTTGTTTTCATCCTAACCGCTGTTG 610
Query 595 TTACCCTTGAAGGTGTCAACAAGTGCTCCTCCTTTGATTGTTTTGGGAGGCGGTTAGGAC 654
||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct 611 TTACCCTTGAAGGTGTCAACAAGTGCTCCTCTTTTGATTGTTTCGGGAGGCGGCTAGGAC 670
Query 655 CACGTCTTCTTGGTAGGATAGATGATTCAGAGCAGAGACTAGTTAGAGATTTTTACAAAA 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 CACGTCTTCTTGGTAGGATAGATGATTCAGAGCAGAGACTAGTTAGAGATTTTTACAAAA 730
Query 715 TTCTAAATGAAGTAAGCACTCAAGAAATTCCAGATGGTTTAAAGCTTCCAGATTCTTTTA 774
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 731 TTCTAAATGAAGTAAGCACTCAAGAAATTCCAGATGGTTTAAAGCTTCCAGAGTCTTTTA 790
Query 775 GTCAACTTGTTTCGGATATGAAGAACAACCACTATGATGCGAAAACATTTGCCCTCGTAC 834
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 791 GTCAACTGGTTTCGGATATGAAGAACAACCACTATGATGCTAAAACATTTGCCCTCGTAT 850
Query 835 TTCGAGCTATGGTAGAGAAGTTTGAAAGGGAATTAAGGGAATCCAAATTTGCAGAACTCA 894
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 851 TTCGAGCTATGGTAGAGAAGTTTGAAAGGGATTTAAGGGAATCCAAATTTGCAGAACTCA 910
Query 895 TGAACAAACACTTTGCTGCAAGTTCAATTCCAAAAGGAATTCACTGTCTCTCTTTAAGAC 954
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 911 TGAACAAGCACTTTGCTGCAAGTTCAATTCCAAAAGGAATTCACTGTCTCTCTTTAAGAC 970
Query 955 TAACTGATGAATATTCCTCCAATGCTCATGCCCGGAGACAGCTTCCTTCCCCGGAGCTTC 1014
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 971 TAACCGATGAATATTCCTCCAATGCTCATGCCCGGAGACAGCTTCCTTCCCCGGAGCTTC 1030
Query 1015 TCCCTGTTCTCTCAGACAATGCTTACCATCATTTTGTTCTAGCTACAGACAATATCTTGG 1074
|||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct 1031 TCCCTGTTCTCTCAGACAATGCTTACCACCATTTTGTTCTAGCTACAGATAATATCTTAG 1090
Query 1075 CTGCATCGGTTGTGGTCTCATCTGCTGTTCAATCATCTTCAAAACCCGAGAAAATTGTCT 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1091 CTGCATCGGTTGTGGTCTCATCTGCTGTTCAATCATCTTCAAAACCCGAGAAAATTGTCT 1150
Query 1135 TTCATGTTATCACAGACAAGAAAACCTATGCGGGTATGCATTCTTGGTTTGCGCTCAATT 1194
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1151 TCCATGTTATCACAGACAAGAAAACCTATGCGGGTATGCATTCTTGGTTTGCACTCAATT 1210
Query 1195 CTGTCGCTCCTGCGATTGTTGAAGTCAAAAGTGTTCATCAGTTTGACTGGTTAACAAGAG 1254
|||| |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 1211 CTGTTGCTCCTGCGATTGTTGAAGTGAAAAGCGTTCATCAGTTTGATTGGTTAACAAGAG 1270
Query 1255 AGAATGTTCCGGTTCTCGAAGCTGTGGAAAGCCATAACAGTATCAGAAATTATTACCATG 1314
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 AGAATGTTCCAGTTCTTGAAGCTGTGGAAAGCCATAACAGTATCAGAAATTATTACCATG 1330
Query 1315 GGAATCATATCGCTGGTGCAAACCTCAGTGAAACAACTCCTCGAACATTTGCTTCGAAAC 1374
|||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 1331 GGAATCATATTGCTGGTGCAAACCTCAGCGAAACAACCCCTCGAACATTTGCTTCGAAAC 1390
Query 1375 TGCAATCAAGAAGTCCCAAATACATATCTTTGCTCAACCATCTAAGAATATATCTACCAG 1434
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1391 TGCAGTCAAGAAGTCCCAAATACATATCTTTGCTCAACCATCTTAGAATATATCTACCAG 1450
Query 1435 AGCTTTTTCCGAACTTAGACAAGGTAGTGTTCTTAGATGATGATATAGTGATACAGAGAG 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1451 AGCTTTTTCCGAACTTAGACAAGGTAGTGTTCTTAGATGATGATATAGTGATACAGAAAG 1510
Query 1495 ATTTATCTCCGCTTTGGGATATTGACCTTAACGGGAAGGTTAATGGAGCTGTGGAGACTT 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1511 ATTTATCTCCGCTTTGGGATATTGACCTTAACGGGAAGGTTAATGGAGCTGTGGAGACTT 1570
Query 1555 GTCGAGGAGAAGATGTATGGGTTATGTCAAAGCGTCTTAGGAACTACTTCAATTTCTCTC 1614
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1571 GTCGAGGAGAAGACGTATGGGTTATGTCAAAGCGTCTTAGGAACTACTTCAATTTTTCTC 1630
Query 1615 ACCCCCTCATCGCAAAGCATTTGGATCCCGAAGAATGTGCTTGGGCTTATGGAATGAATA 1674
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1631 ACCCGCTCATCGCAAAGCATTTAGATCCCGAAGAATGTGCTTGGGCTTATGGAATGAATA 1690
Query 1675 TCTTCGATCTACGGACTTGGAGGAAGACAAATATCAGAGAAACTTATCATTCTTGGCTTA 1734
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1691 TCTTTGATCTACGGACTTGGAGGAAGACAAATATCAGAGAAACGTATCATTCTTGGCTTA 1750
Query 1735 AAGAGAATCTGAAGTCGAATCTAACAATGTGGAAACTTGGAACATTGCCTCCTGCTCTAA 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1751 AAGAGAATCTGAAGTCGAATCTAACAATGTGGAAACTTGGAACATTGCCTCCTGCTCTAA 1810
Query 1795 TAGCATTTAAAGGTCATGTTCAGCCAATAGATTCGTCTTGGCATATGCTTGGATTAGGTT 1854
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1811 TAGCATTTAAAGGTCATGTTCAGCCAATAGATTCCTCTTGGCATATGCTTGGATTAGGTT 1870
Query 1855 ATCAGAGCAACACCAACTTAGAAAATGCGAAGAAAGCTGCAGTGATTCATTACAATGGCC 1914
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1871 ATCAGAGCAAGACCAACTTAGAAAATGCGAAGAAAGCTGCAGTGATTCATTACAATGGCC 1930
Query 1915 AATCAAAGCCGTGGCTCGAGATAGGTTTCGAGCATCTCAGACCATTCTGGACAAAATATG 1974
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1931 AATCAAAGCCGTGGCTTGAGATAGGTTTCGAGCATCTCAGACCATTCTGGACAAAATATG 1990
Query 1975 TTAACTACTCCAATGATTTCATAAAGAATTGTCATATCTTGGAATAGCAAACAGAAAGCT 2034
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1991 TTAACTACTCCAATGATTTCATTAAGAATTGTCATATCTTGGAATAGCAAACAGAAAGCT 2050
Query 2035 TCCAGATAATCTAGAAGCAGACTGGAGATTTCGCGGGTTCTGCAGATTTACTCGGAGTTT 2094
| || ||||||| |||||||||||| ||||| |||||||||||||||||||||||| |||
Sbjct 2051 TGCATATAATCTCGAAGCAGACTGGGGATTTTGCGGGTTCTGCAGATTTACTCGGAATTT 2110
Query 2095 AGCTGGACAATGAAA--CCAGTTGCAGAGCAGCAGAAAAAagagagagagagagagaAAT 2152
|||||||| |||||| ||||||||||||||||||| ||| |||| | ||| ||| || |
Sbjct 2111 AGCTGGACCATGAAAGACCAGTTGCAGAGCAGCAGAGAAA-GAGA-A-AGATAGA-AA-T 2165
Query 2153 AAAGATTCATTCTTCTGTAAAAATAGAAGGTACCCTTTTTGAGATTCTTTTTGGTTTTGA 2212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2166 AAAGATTCATTCTTCTGTAAAAATAGAAGGTACCCTTTTTGAGATTCTTTTTGGTTTTGA 2225
Query 2213 AGTAAAGATTCCAATTTTGGATCTGTTATAAGATCAGGGAAGGTTTAAGGACACCCCCCA 2272
||||||||||||||||||||||||||||||||| || |||||||||||||||| | || |
Sbjct 2226 AGTAAAGATTCCAATTTTGGATCTGTTATAAGAACAAGGAAGGTTTAAGGACATCACC-A 2284
Query 2273 AGAAGAAATTGGATTTTGGTCATGATCACAACAGTCCCAAGGACCAACAACACACTGTTG 2332
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2285 -GAAGAAATTGGATTTTGGTCATGATCACAACAGTCC-AAGGACCAACAACACACTGTTG 2342
Query 2333 CATTTGCTCCACTTGTACTCttttatatttttttggttcgatttttgacagttaaaattc 2392
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2343 CATTTGCTCCACTTGTACTCTTTT-TATTTTTTTGGTTCGATTTTTGACAGTTAAAATTC 2401
Query 2393 cacat-tttttt--t----g-ttt--t---agggattttATATGGACATTATTGCTTTGT 2439
||||| |||||| | | ||| | |||||||||||||||||||||||| |||||
Sbjct 2402 CACATATTTTTTACTAAATGATTTAGTTTTAGGGATTTTATATGGACATTATTGTTTTGT 2461
Query 2440 TAAGGTCCCTAATT 2453
||||||| ||||||
Sbjct 2462 TAAGGTCTCTAATT 2475
> AT5G15470.1 | Symbols: GAUT14 | galacturonosyltransferase 14
| chr5:5021010-5024742 REVERSE LENGTH=2596
Length=2596
Score = 1916 bits (1037), Expect = 0.0
Identities = 1455/1658 (88%), Gaps = 24/1658 (1%)
Strand=Plus/Plus
Query 400 GTGGGGCTGCACGAAC-A--AGGATGCAGCTTCACATATCGCCGAGCATGAGAAGCATTA 456
|||||||||||| | | | |||||||||||||||||||||||||| |||||||||||||
Sbjct 552 GTGGGGCTGCACTACCAAGGAGGATGCAGCTTCACATATCGCCGAGTATGAGAAGCATTA 611
Query 457 CGATATCGAGCAGCAATGAGTTTATCGATTTGATGAAGATCAAAGTCGCAGCTCGTCACA 516
|||| |||||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct 612 CGATTTCGAGCAGCAATGAGTTTATTGACTTGATGAAGATCAAGGTCGCAGCTCGTCACA 671
Query 517 TTTCTTACCGAACTCTCTTCCACACTATCTTAATCCTCGCTTTCTTGTTGCCTTTTGTCT 576
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 672 TCTCTTACCGAACTCTCTTCCACACCATCTTAATCCTCGCTTTCTTGTTGCCTTTTGTTT 731
Query 577 TCATCCTAACCGCTGTTGTTACCCTTGAAGGTGTCAACAAGTGCTCCTCCTTTGATTGTT 636
|||| || |||||||||||||||||||| ||||||||||| ||||||||| |||||||||
Sbjct 732 TCATTCTCACCGCTGTTGTTACCCTTGAGGGTGTCAACAAATGCTCCTCCATTGATTGTT 791
Query 637 TTGGGAGGCGGTTAGGACCACGTCTTCTTGGTAGGATAGATGATTCAGAGCAGAGACTAG 696
| ||||||||| |||| |||||||||||||||||| |||||||||| || |||||||||
Sbjct 792 TAGGGAGGCGGATAGGTCCACGTCTTCTTGGTAGGGTAGATGATTC--AG-AGAGACTAG 848
Query 697 TTAGAGATTTTTACAAAATTCTAAATGAAGTAAGCACTCAAGAAATTCCAGATGGTTTAA 756
|||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 849 CTAGAGACTTTTATAAAATTCTAAACGAAGTAAGCACTCAAGAAATTCCAGATGGTTTGA 908
Query 757 AGCTTCCAGATTCTTTTAGTCAACTTGTTTCGGATATGAAGAACAACCACTATGATGCGA 816
|||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct 909 AGCTTCCAAATTCTTTTAGTCAACTTGTTTCCGATATGAAGAATAACCACTATGATGCAA 968
Query 817 AAACATTTGCCCTCGTACTTCGAGCTATGGTAGAGAAGTTTGAAAGGGAAT-TAAGGGAA 875
|||||||||| || || || ||||| ||| | |||||||||||| | | || | ||||||
Sbjct 969 AAACATTTGCTCTTGTGCTGCGAGCCATGATGGAGAAGTTTGAACGTG-ATATGAGGGAA 1027
Query 876 TCCAAATTTGCAGAACTCATGAACAAACACTTTGCTGCAAGTTCAATTCCAAAAGGAATT 935
|| |||||||||||||| |||||||| |||||||| |||||||| ||||| ||||| |||
Sbjct 1028 TCGAAATTTGCAGAACTTATGAACAAGCACTTTGCAGCAAGTTCCATTCCCAAAGGCATT 1087
Query 936 CACTGTCTCTCTTTAAGACTAACTGATGAATATTCCTCCAATGCTCATGCCCGGAGACAG 995
|| ||||||||| ||||||| || |||||||||||||||||||||||||| || ||||||
Sbjct 1088 CATTGTCTCTCTCTAAGACTGACAGATGAATATTCCTCCAATGCTCATGCTCGAAGACAG 1147
Query 996 CTTCCTTCCCCGGAGCTTCTCCCTGTTCTCTCAGACAATGCTTACCATCATTTTGTTCTA 1055
|||||||| || ||| ||||||||||||| ||||| ||||||||||| || ||| || |
Sbjct 1148 CTTCCTTCACCAGAGTTTCTCCCTGTTCTTTCAGATAATGCTTACCACCACTTTATT-TT 1206
Query 1056 G-CTACAGACAATATCTTGGCTGCATCGGTTGTGGTCTCATCTGCTGTTCAATCATCTTC 1114
| | || |||||||| |||||||| || |||||||||||||| |||||||| ||||||||
Sbjct 1207 GTCCACGGACAATATTTTGGCTGCCTCAGTTGTGGTCTCATCCGCTGTTCAGTCATCTTC 1266
Query 1115 AAAACCCGAGAAAATTGTCTTTCATGTTATCACAGACAAGAAAACCTATGCGGGTATGCA 1174
|||||||||||||||||||||||| | || |||||||||||||||||||||||||||||
Sbjct 1267 AAAACCCGAGAAAATTGTCTTTCACATCATTACAGACAAGAAAACCTATGCGGGTATGCA 1326
Query 1175 TTCTTGGTTTGCGCTCAATTCTGTCGCTCCTGCGATTGTTGAAGTCAAAAGTGTTCATCA 1234
||| ||||||||||| |||||||| || || || |||||||| || ||| ||||||||||
Sbjct 1327 TTCATGGTTTGCGCTTAATTCTGTTGCACCAGCAATTGTTGAGGTTAAAGGTGTTCATCA 1386
Query 1235 GTTTGACTGGTTAACAAGAGAGAATGTTCCGGTTCTCGAAGCTGTGGAAAGCCATAACAG 1294
|||||||||||| || |||||||||||||||||| | |||||||||||||||||||| |
Sbjct 1387 GTTTGACTGGTTGACGAGAGAGAATGTTCCGGTTTTGGAAGCTGTGGAAAGCCATAATGG 1446
Query 1295 TATCAGAAATTATTACCATGGGAATCATATCGCTGGTGCAAACCTCAGTGAAACAACTCC 1354
| |||| | ||||| |||||||||||| ||||||| |||||||||| |||||||||||
Sbjct 1447 TGTCAGGGACTATTATCATGGGAATCATGTCGCTGGGGCAAACCTCACCGAAACAACTCC 1506
Query 1355 TCGAACATTTGCTTCGAAACTGCAATCAAGAAGTCCCAAATACATATCTTTGCTCAACCA 1414
||||||||||||||| ||| |||| || |||||||| |||||||||||||||||||||||
Sbjct 1507 TCGAACATTTGCTTCAAAATTGCAGTCTAGAAGTCCAAAATACATATCTTTGCTCAACCA 1566
Query 1415 TCTAAGAATATATCTACCAGAGCTTTTTCCGAACTTAGACAAGGTAGTGTTCTTAGATGA 1474
||| ||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||
Sbjct 1567 TCTTAGAATATATATACCAGAGCTTTTCCCGAACTTGGACAAGGTGGTTTTCTTAGACGA 1626
Query 1475 TGATATAGT-GATACAGAGAGATTTATCTCCGCTTTGGGATATTGACCTTAACGGGAAGG 1533
||||||||| | | ||| |||| ||| |||| ||||||||| ||||||| || ||||
Sbjct 1627 TGATATAGTTG-TCCAGGGAGACTTAACTCCACTTTGGGATGTTGACCTCGGTGGTAAGG 1685
Query 1534 TTAATGGAGCTGTGGAGACTTGTC-GAGGAGAAGATGTATGGGTTATGTCAAAGCGTCTT 1592
| ||||| || || |||||||| | | || ||||||| |||||| |||||||||||| ||
Sbjct 1686 TCAATGGGGCAGTAGAGACTTG-CAGGGGTGAAGATGAATGGGTGATGTCAAAGCGT-TT 1743
Query 1593 A-GGAACTACTTCAATTTCTCTCACCCCCTCATCGCAAAGCATTTGGATCCCGAAGAATG 1651
| ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 1744 AAGGAACTACTTCAATTTCTCTCACCCGCTCATCGCAAAGCATTTAGATCCTGAAGAATG 1803
Query 1652 TGCTTGGGCTTATGGAATGAATATCTTCGATCTACG-GACTTGGAGGAAGACAAATATCA 1710
||||||||| ||||| ||||||||||||||||||| | |||||||||| ||||||||||
Sbjct 1804 TGCTTGGGCATATGGTATGAATATCTTCGATCTACAAG-CTTGGAGGAAAACAAATATCA 1862
Query 1711 GAGAAACTTATCATTCTTGGCTTAAAGAGAATCTGAAGTCGAATCTAACAATGTGGAAAC 1770
||||||| ||||| |||||||||| ||||||||| ||||| ||||| |||||||||||||
Sbjct 1863 GAGAAACGTATCACTCTTGGCTTAGAGAGAATCTAAAGTCAAATCTGACAATGTGGAAAC 1922
Query 1771 TTGGAACATTGCCTCCTGCTCTAATAGCATTTAAAGGTCATGTTCAGCC-AATAGATTCG 1829
||||||| |||||||||||||| || || || || ||||| || || | |||||| |||
Sbjct 1923 TTGGAACCTTGCCTCCTGCTCTTATCGCGTTCAAGGGTCACGTACA-CATAATAGACTCG 1981
Query 1830 TCTTGGCATATGCTTGGATTAGGTTATCAGAGCAACACCAACTTAGAAAATGCGAAGAAA 1889
|| ||||||||||| |||||||| || |||||||| |||||| ||||||||| |||||||
Sbjct 1982 TCATGGCATATGCTAGGATTAGGCTACCAGAGCAAGACCAACATAGAAAATGTGAAGAAA 2041
Query 1890 GCTGCAGTGATTCATTACAATGGCCAATCAAAGCCGTGGCTCGAGATAGGTTTCGAGCAT 1949
|| |||||||| || |||||||| || |||||||| ||||| ||||| ||||||||||||
Sbjct 2042 GCAGCAGTGATCCACTACAATGGGCAGTCAAAGCCATGGCTGGAGATTGGTTTCGAGCAT 2101
Query 1950 CT-CAGACCATTCTGGACAAAATATGTTAACTACTCCAATGATTTCATAAAGAATTGTCA 2008
|| | | ||||||||||| ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct 2102 CTGCGG-CCATTCTGGACCAAATACGTCAACTACTCAAATGATTTCATCAAGAACTGTCA 2160
Query 2009 TATCTTGGAATAGCAAA-CAGAAAGCTTCCAGATAATC 2045
|| ||||| ||| ||| | |||| ||| |||| |||
Sbjct 2161 CATATTGGAGTAGGAAAACCGAAA-CTTTGAGATGATC 2197
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121705003718
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5