BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477481
Length=1691
Score E
Sequences producing significant alignments: (Bits) Value
AT3G02468.1 | Symbols: CPuORF9 | conserved peptide upstream ope... 2817 0.0
AT3G02470.1 | Symbols: SAMDC | S-adenosylmethionine decarboxyla... 2748 0.0
AT5G15948.1 | Symbols: CPuORF10 | conserved peptide upstream op... 835 0.0
AT5G15950.1 | Symbols: | Adenosylmethionine decarboxylase fami... 835 0.0
> AT3G02468.1 | Symbols: CPuORF9 | conserved peptide upstream open
reading frame 9 | chr3:509087-511557 FORWARD LENGTH=1876
Length=1876
Score = 2817 bits (1525), Expect = 0.0
Identities = 1652/1710 (97%), Gaps = 22/1710 (1%)
Strand=Plus/Plus
Query 1 ACGAACGCATCTCATTGCTTCATCATTACCAAATCATCATTTATAATCGTTTCTCTCAAA 60
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1 ACGAACGCATCTCATTGCTTCATCATTACCAAATCATCAACT-TAATCGTTTCTCTCAAA 59
Query 61 TTTAGGG----------T-T------TCTTGCGTTTTTCTGAATTCATCTTTATCTGGTT 103
||||||| | | ||||||| ||||||||| |||||| |||||||||
Sbjct 60 TTTAGGGTTTTCTCTTTTCTCGAAAGTCTTGCGGTTTTCTGAA-TCATCTCTATCTGGTT 118
Query 104 TGAGGGTTTCGTTTGATATCTGGAAAAAGGGGTTTCTGGAAACAAGGAGTTCATAGTTCG 163
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 119 TGAGGGTTTCGTTTGATATCTGGAGAAAGGGGTTTCTGGAAACAAGGAGTTCATAATTCG 178
Query 164 CGATCTAGATCTATCGATCTTCATTTATATGTAAAAGCGTGAATGAGATTATGATGGAGT 223
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 179 CGATCTTGATCTATCGATCTTCATTTATATATAAAAGCGTGAATGAGATTATGATGGAGT 238
Query 224 CGAAAGGTGGTAAAAAGAAGTCCAGCAGTAGTAGTTCCTTATTTTACGAAGCTCCCCTCG 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 CGAAAGGTGGTAAAAAGAAGTCCAGCAGTAGTAGTTCCTTATTTTACGAAGCTCCCCTCG 298
Query 284 GTTACAGCATTGAAGACGTTCGTCCAAACGGTGGAATCAAGAAATTCAAATCTTCTGTCT 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 GTTACAGCATTGAAGACGTTCGTCCAAACGGTGGAATCAAGAAATTCAAATCTTCTGTCT 358
Query 344 ACTCTAACTGCTCCAAGAGGCCATCCTGAGTACCAGCGTGCACCGATCTTCTTAATATAG 403
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 359 ACTCAAACTGCTCCAAGAGGCCATCCTGAGTACCAGCGTGCACCGATCTTCATAATATAG 418
Query 404 TTATAGCTTTCTTTACTTTCCAGTTTATAATTTTCTTCTTTCAAAGCTCCCTTTCTGCTG 463
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 419 TTATAGCTTTCTTTACTTTCCAGTTTATAATTTTCTTCTTTCAAAGCTCCTTTTCTGCTG 478
Query 464 GTTCCCGGATCCAATCGTTCTCTCCTCCTACTACAAGTCCTGTCGCTCACACAACAAGGC 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 GTTCCCGGATCCAATCGTTCTCTCCTCCTACTACAAGTCCTGTCGCTCACACAACAAGGC 538
Query 524 GAGATGGCCTTATCTGCAATCGGTTTCGAAGGTTACGAGAAACGGCTCGAGGTTACTTTC 583
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 539 GAGATGGCCTTATCTGCAATCGGTTTCGAAGGTTACGAGAAACGGCTCGAGGTGACTTTC 598
Query 584 TTTGAGCCAAGCATCTTTCAAGACTCCAAGGGACTGGGACTCCGTGCTCTTACCAAGTCC 643
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 599 TTTGAGCCAAGCATCTTTCAAGACTCCAAGGGACTGGGACTCCGTGCTCTGACCAAGTCC 658
Query 644 CAGCTTGATGAAATTCTTACACCTGCTGCATGCACGATCGTTTCTTCTCTCTCCAACGAT 703
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 659 CAGCTTGATGAAATTCTTACACCTGCTGCATGCACGATCGTTTCATCTCTCTCCAACGAT 718
Query 704 CAATTGGACTCTTACGTACTCTCTGAGTCCAGCTTCTTTGTCTACCCCTACAAAGTCATC 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 CAATTGGACTCTTACGTACTCTCTGAGTCCAGCTTCTTTGTCTACCCCTACAAAGTCATC 778
Query 764 ATCAAGACTTGCGGTACCACGAAGCTCCTCCTCTCTATCCCACCACTTCTAAAGCTGGCT 823
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 779 ATCAAGACTTGCGGTACCACTAAGCTCCTCCTCTCTATCCCACCACTTCTAAAGCTGGCT 838
Query 824 GGTGAGCTCTCTTTGAGTGTCAAGTCTGTGAAGTACACTCGTGGCTCCTTCCTCTGCCCC 883
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 839 GGTGAGCTCTCTCTGAGTGTCAAGTCTGTGAAGTACACTCGCGGCTCCTTCCTCTGCCCC 898
Query 884 GGAGGCCAGCCTTTCCCTCACCGCAGCTTCTCTGAAGAAGTCTCTGTTCTTGATGGGCAC 943
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GGAGGCCAGCCTTTTCCTCACCGCAGCTTCTCTGAAGAAGTCTCTGTTCTTGATGGGCAC 958
Query 944 TTTACTCAGCTGGGCTTGAACAGCGTAGCCTACTTGATGGGCAATGATGATGAGACTAAG 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 TTTACTCAGCTGGGCTTGAACAGCGTAGCCTACTTGATGGGCAATGATGATGAGACTAAG 1018
Query 1004 AAATGGCATGTCTATGCTGCCTCTGCCCAGGACTCCAGCAACTGCAACAACAATGTCTAC 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 AAATGGCATGTCTATGCTGCCTCTGCCCAGGACTCCAGCAACTGCAACAACAATGTCTAC 1078
Query 1064 ACTCTCGAGATGTGCATGACTGGTCTGGACAGAGAGAAAGCTTCTGTCTTCTACAAGAAC 1123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1079 ACTCTCGAGATGTGCATGACTGGTCTGGACAGAGAGAAAGCTGCTGTCTTCTACAAGGAT 1138
Query 1124 GAAGCTGACAAAACTGGGTCAATGACTGACAACTCTGGAATCCGAAAGATCCTTCCCCAG 1183
||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||| ||
Sbjct 1139 GAAGCTGACAAGACTGGGTCAATGACTGATAACTCTGGAATCAGAAAGATCCTTCCCAAG 1198
Query 1184 TCCCAGATCTGCGACTTTGAATTCGAGCCCTGTGGCTACTCTATGAACTCAATTGAAGGG 1243
|| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1199 TCTGAGATCTGCGACTTTGAATTCGAGCCCTGCGGCTACTCTATGAACTCAATTGAAGGG 1258
Query 1244 GATGCAATCTCCACGATCCATGTGACCCCTGAAGATGGGTTTAGCTACGCTAGCTTTGAA 1303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1259 GATGCAATCTCCACGATCCATGTGACCCCTGAAGATGGGTTTAGCTACGCTAGCTTCGAA 1318
Query 1304 GCTGTGGGTTACGACTTCAACACTATTGACCTGAGCCAGCTGGTGACAAGGGTACTCTCT 1363
||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct 1319 GCTGTGGGTTACGACTTCAACACCCTTGACCTTAGCCAGCTGGTGACAAGGGTTCTCTCT 1378
Query 1364 TGCTTCGAGCCCAAGCAATTCTCTGTAGCTGTGCACTCGAGCGTTGGAGCGAACGCGTAC 1423
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1379 TGCTTCGAGCCCAAGCAATTCTCTGTAGCTGTGCACTCGAGCGTTGGAGCGAACTCATAC 1438
Query 1424 AAGCCAGAGATCACTGTAGACTTGGAAGACTATGGGTGCAGAGAGAGGACATTTGAGTCT 1483
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1439 AAGCCAGAGATTACTGTAGACTTGGAAGACTATGGGTGCAGAGAGAGGACATTTGAGTCT 1498
Query 1484 CTAGGAGAAGAGAGTGGAACAGTGATGTATCAGACGTTTGAGAAGCTTGGTAAGTACTGT 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1499 CTAGGAGAAGAGAGTGGAACAGTGATGTATCAGACGTTTGAGAAGCTTGGTAAGTACTGT 1558
Query 1544 GGATCGCCTAGATCTACCTTGAAGTGTGAATGGAGCAGCAACAATAGCTGCAGCAGCGAG 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 GGATCGCCTAGATCTACCTTGAAGTGTGAATGGAGCAGCAACAATAGCTGCAGCAGCGAG 1618
Query 1604 GACGAGAAGGACGAGGGAATCTAGCAGAATTTT-CTTCCTAATAACTAttttcgagcttt 1662
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1619 GACGAGAAGGACGAGGGAATCTAGCAGAATTTTTCTTCCTAATAACTATTTTCGAGCTTT 1678
Query 1663 ctgtttttgctt-tttctttttAAAAAACT 1691
||||||||| || |||||||||||||||||
Sbjct 1679 CTGTTTTTG-TTCTTTCTTTTTAAAAAACT 1707
> AT3G02470.1 | Symbols: SAMDC | S-adenosylmethionine decarboxylase
| chr3:509117-511561 FORWARD LENGTH=1953
Length=1953
Score = 2748 bits (1488), Expect = 0.0
Identities = 1564/1601 (98%), Gaps = 3/1601 (0%)
Strand=Plus/Plus
Query 93 TTTATCTGGTTTGAGGGTTTCGTTTGATATCTGGAAAAAGGGGTTTCTGGAAACAAGGAG 152
||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 181 TTTTTCAGGTTTGAGGGTTTCGTTTGATATCTGGAGAAAGGGGTTTCTGGAAACAAGGAG 240
Query 153 TTCATAGTTCGCGATCTAGATCTATCGATCTTCATTTATATGTAAAAGCGTGAATGAGAT 212
|||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 241 TTCATAATTCGCGATCTTGATCTATCGATCTTCATTTATATATAAAAGCGTGAATGAGAT 300
Query 213 TATGATGGAGTCGAAAGGTGGTAAAAAGAAGTCCAGCAGTAGTAGTTCCTTATTTTACGA 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TATGATGGAGTCGAAAGGTGGTAAAAAGAAGTCCAGCAGTAGTAGTTCCTTATTTTACGA 360
Query 273 AGCTCCCCTCGGTTACAGCATTGAAGACGTTCGTCCAAACGGTGGAATCAAGAAATTCAA 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 AGCTCCCCTCGGTTACAGCATTGAAGACGTTCGTCCAAACGGTGGAATCAAGAAATTCAA 420
Query 333 ATCTTCTGTCTACTCTAACTGCTCCAAGAGGCCATCCTGAGTACCAGCGTGCACCGATCT 392
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 ATCTTCTGTCTACTCAAACTGCTCCAAGAGGCCATCCTGAGTACCAGCGTGCACCGATCT 480
Query 393 TCTTAATATAGTTATAGCTTTCTTTACTTTCCAGTTTATAATTTTCTTCTTTCAAAGCTC 452
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TCATAATATAGTTATAGCTTTCTTTACTTTCCAGTTTATAATTTTCTTCTTTCAAAGCTC 540
Query 453 CCTTTCTGCTGGTTCCCGGATCCAATCGTTCTCTCCTCCTACTACAAGTCCTGTCGCTCA 512
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 CTTTTCTGCTGGTTCCCGGATCCAATCGTTCTCTCCTCCTACTACAAGTCCTGTCGCTCA 600
Query 513 CACAACAAGGCGAGATGGCCTTATCTGCAATCGGTTTCGAAGGTTACGAGAAACGGCTCG 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 CACAACAAGGCGAGATGGCCTTATCTGCAATCGGTTTCGAAGGTTACGAGAAACGGCTCG 660
Query 573 AGGTTACTTTCTTTGAGCCAAGCATCTTTCAAGACTCCAAGGGACTGGGACTCCGTGCTC 632
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AGGTGACTTTCTTTGAGCCAAGCATCTTTCAAGACTCCAAGGGACTGGGACTCCGTGCTC 720
Query 633 TTACCAAGTCCCAGCTTGATGAAATTCTTACACCTGCTGCATGCACGATCGTTTCTTCTC 692
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 721 TGACCAAGTCCCAGCTTGATGAAATTCTTACACCTGCTGCATGCACGATCGTTTCATCTC 780
Query 693 TCTCCAACGATCAATTGGACTCTTACGTACTCTCTGAGTCCAGCTTCTTTGTCTACCCCT 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 TCTCCAACGATCAATTGGACTCTTACGTACTCTCTGAGTCCAGCTTCTTTGTCTACCCCT 840
Query 753 ACAAAGTCATCATCAAGACTTGCGGTACCACGAAGCTCCTCCTCTCTATCCCACCACTTC 812
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 841 ACAAAGTCATCATCAAGACTTGCGGTACCACTAAGCTCCTCCTCTCTATCCCACCACTTC 900
Query 813 TAAAGCTGGCTGGTGAGCTCTCTTTGAGTGTCAAGTCTGTGAAGTACACTCGTGGCTCCT 872
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 901 TAAAGCTGGCTGGTGAGCTCTCTCTGAGTGTCAAGTCTGTGAAGTACACTCGCGGCTCCT 960
Query 873 TCCTCTGCCCCGGAGGCCAGCCTTTCCCTCACCGCAGCTTCTCTGAAGAAGTCTCTGTTC 932
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 961 TCCTCTGCCCCGGAGGCCAGCCTTTTCCTCACCGCAGCTTCTCTGAAGAAGTCTCTGTTC 1020
Query 933 TTGATGGGCACTTTACTCAGCTGGGCTTGAACAGCGTAGCCTACTTGATGGGCAATGATG 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 TTGATGGGCACTTTACTCAGCTGGGCTTGAACAGCGTAGCCTACTTGATGGGCAATGATG 1080
Query 993 ATGAGACTAAGAAATGGCATGTCTATGCTGCCTCTGCCCAGGACTCCAGCAACTGCAACA 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 ATGAGACTAAGAAATGGCATGTCTATGCTGCCTCTGCCCAGGACTCCAGCAACTGCAACA 1140
Query 1053 ACAATGTCTACACTCTCGAGATGTGCATGACTGGTCTGGACAGAGAGAAAGCTTCTGTCT 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1141 ACAATGTCTACACTCTCGAGATGTGCATGACTGGTCTGGACAGAGAGAAAGCTGCTGTCT 1200
Query 1113 TCTACAAGAACGAAGCTGACAAAACTGGGTCAATGACTGACAACTCTGGAATCCGAAAGA 1172
|||||||| | ||||||||||| ||||||||||||||||| |||||||||||| ||||||
Sbjct 1201 TCTACAAGGATGAAGCTGACAAGACTGGGTCAATGACTGATAACTCTGGAATCAGAAAGA 1260
Query 1173 TCCTTCCCCAGTCCCAGATCTGCGACTTTGAATTCGAGCCCTGTGGCTACTCTATGAACT 1232
|||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1261 TCCTTCCCAAGTCTGAGATCTGCGACTTTGAATTCGAGCCCTGCGGCTACTCTATGAACT 1320
Query 1233 CAATTGAAGGGGATGCAATCTCCACGATCCATGTGACCCCTGAAGATGGGTTTAGCTACG 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 CAATTGAAGGGGATGCAATCTCCACGATCCATGTGACCCCTGAAGATGGGTTTAGCTACG 1380
Query 1293 CTAGCTTTGAAGCTGTGGGTTACGACTTCAACACTATTGACCTGAGCCAGCTGGTGACAA 1352
||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 1381 CTAGCTTCGAAGCTGTGGGTTACGACTTCAACACCCTTGACCTTAGCCAGCTGGTGACAA 1440
Query 1353 GGGTACTCTCTTGCTTCGAGCCCAAGCAATTCTCTGTAGCTGTGCACTCGAGCGTTGGAG 1412
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 GGGTTCTCTCTTGCTTCGAGCCCAAGCAATTCTCTGTAGCTGTGCACTCGAGCGTTGGAG 1500
Query 1413 CGAACGCGTACAAGCCAGAGATCACTGTAGACTTGGAAGACTATGGGTGCAGAGAGAGGA 1472
||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1501 CGAACTCATACAAGCCAGAGATTACTGTAGACTTGGAAGACTATGGGTGCAGAGAGAGGA 1560
Query 1473 CATTTGAGTCTCTAGGAGAAGAGAGTGGAACAGTGATGTATCAGACGTTTGAGAAGCTTG 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 CATTTGAGTCTCTAGGAGAAGAGAGTGGAACAGTGATGTATCAGACGTTTGAGAAGCTTG 1620
Query 1533 GTAAGTACTGTGGATCGCCTAGATCTACCTTGAAGTGTGAATGGAGCAGCAACAATAGCT 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 GTAAGTACTGTGGATCGCCTAGATCTACCTTGAAGTGTGAATGGAGCAGCAACAATAGCT 1680
Query 1593 GCAGCAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAATTTT-CTTCCTAATAACTAt 1651
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1681 GCAGCAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAATTTTTCTTCCTAATAACTAT 1740
Query 1652 tttcgagctttctgtttttgctt-tttctttttAAAAAACT 1691
|||||||||||||||||||| || |||||||||||||||||
Sbjct 1741 TTTCGAGCTTTCTGTTTTTG-TTCTTTCTTTTTAAAAAACT 1780
> AT5G15948.1 | Symbols: CPuORF10 | conserved peptide upstream
open reading frame 10 | chr5:5205871-5208036 FORWARD LENGTH=1802
Length=1802
Score = 835 bits (452), Expect = 0.0
Identities = 924/1144 (81%), Gaps = 64/1144 (6%)
Strand=Plus/Plus
Query 514 ACAACAAGGC-GAGATGGCCTTATCTGCAATCGGTTTCGAAGGTTACGAGAAACGGCTCG 572
||||||| || ||||||||| | ||||| || || ||||||||||||||||| ||||| |
Sbjct 458 ACAACAACGCAGAGATGGCCATGTCTGCTATTGGCTTCGAAGGTTACGAGAAGCGGCTTG 517
Query 573 AGGTTACTTTCTTTGAGCCAAG-CATCTTTCAAGACTC-CAAGGGACTGGGACTCCGTGC 630
| ||||||||||||||||| | | |||||| ||| | ||||| | ||| || |||||
Sbjct 518 AAGTTACTTTCTTTGAGCCTGGTC-TCTTTCTTGACACTCAAGGAAAAGGG-CTACGTGC 575
Query 631 TCTTACC-AAGTCCCAGCTTGATGAAATTCTTACA-CCTGCTGCA-TGCACGATCGTTTC 687
| ||| | ||||| ||| | ||||| |||||| || || |||| | ||||| ||||| ||
Sbjct 576 T-TTAGCTAAGTCTCAGATCGATGAGATTCTT-CAGCCAGCTG-AGTGCACTATCGTCTC 632
Query 688 TTCTCTCTCCAACGATCAA-TTGGACTCTTACGTACTCTCTGAGTCCAG-CTTCTTTGTC 745
|||||||| |||||||| ||| ||||||| || |||||||||||||| || |||| ||
Sbjct 633 ATCTCTCTCGAACGATCAGCTTG-ACTCTTATGTTCTCTCTGAGTCCAGTCT-CTTTATC 690
Query 746 TACCCCTACAA-AGTCATCATCAAGACTTGCGGTACCACGAAGCTCCTCCTCTCTATCCC 804
| ||| ||||| | || ||||||||||||||||||| || |||||||||||||||||
Sbjct 691 TTCCCGTACAAGA-TCGTCATCAAGACTTGCGGTACTACTAAGCTCCTCCTCTCTATTG- 748
Query 805 A-CCACTTCTAAAGCTG-GCTGGTGAGCTCTCT-TTGA-GTGTCAAGTCTGTGAAGTACA 860
| || || || || | || |||||||| ||| |||| || | ||| |||||| |||||
Sbjct 749 AGCCTCT-CTTGAGGTTAGCCGGTGAGCTTTCTCTTGACGT-T-AAGGCTGTGAGGTACA 805
Query 861 CTCGTGGCTCCTTCCTCTGCCCCGGAGGCCAGCCTTTCCCTCACCGCAGCTTCTCTGAAG 920
||||||| |||||||| || ||||| || || ||||||||||||| |||||||||||
Sbjct 806 CTCGTGGAAGTTTCCTCTGTCCTGGAGGACAACCATTCCCTCACCGCAACTTCTCTGAAG 865
Query 921 AAGTCTCTGTTCTTGATGGGCACTTTACTCAGCTGGGCTTGAA-CAGCGTAGCCTACTTG 979
||||||||||||||||||| |||||| || |||| || || || ||| || |||||||||
Sbjct 866 AAGTCTCTGTTCTTGATGGTCACTTTGCTAAGCTTGGTTT-AAGCAGTGTTGCCTACTTG 924
Query 980 ATGGGCAATGATGATGAGACTAAGAAATGGCATGTCTA-TGCTGC--CT-CTGCCCAGGA 1035
||||||||||| ||||| || |||||||||||||| || | |||| || ||||| | |
Sbjct 925 ATGGGCAATGACGATGAAACCAAGAAATGGCATGTTTACT-CTGCTTCTTCTGCC-A--A 980
Query 1036 CTCCAGCAACTGCAACAACAATGTCTACACTCTCGAGATGTGCATGACTGGTCTGGACAG 1095
| |||||| ||| |||||||||||||| || |||||||| ||||||||||| ||||
Sbjct 981 C---AGCAACAACAAGAACAATGTCTACACGCTTGAGATGTGTATGACTGGTCTAGACAA 1037
Query 1096 AGAGAAAGCTTCTGTCTTCTACAAGAACGAAGCTGACAAAA-CTG--GGT-CAATGACTG 1151
||| || || |||||||||||||||||||| | | ||| ||| ||| | |||||||
Sbjct 1038 AGACAAGGCATCTGTCTTCTACAAGAACGA-G-T--CAAGCTCTGCTGGTTCTATGACTG 1093
Query 1152 ACAACTCTGGAATCCGAAAGATCCTTCCCCAGTCCCAGATCTGCGACTTTGAATTCGAGC 1211
| |||||||| ||| ||||||| || || || ||||| ||||| |||||||| || ||||
Sbjct 1094 ATAACTCTGGCATCAGAAAGATACTGCCTCAATCCCAAATCTGTGACTTTGAGTTTGAGC 1153
Query 1212 CCTGTGGCTACTCTATGAACT-CAATTGAAGGGGATGCAATCTCCACGATCCATGTGACC 1270
||||||||||||| |||||| || | ||||| || |||||||| || |||||||| ||
Sbjct 1154 CCTGTGGCTACTCAATGAACAGCA-TCGAAGGCGACGCAATCTCTACCATCCATGTAACT 1212
Query 1271 CCTGAAGATGGGTTT-AGCTACGCTAGCTTTGAAGCTGTGGGTTACGACTTCAACA-CTA 1328
|| || ||||| ||| |||||||||||||||||||| ||||| || || |||| || | |
Sbjct 1213 CCAGAGGATGG-TTTCAGCTACGCTAGCTTTGAAGCAGTGGGATATGATTTCA-CAACCA 1270
Query 1329 TTGACCTGAGCCAGCTGGTGACAAGGGTACTCTCTTGCTTCGAGCCCAAGCAATTCTCTG 1388
| ||| ||||||| || || ||| |||||| |||||||| | || || ||||||||||
Sbjct 1271 TGGACTTGAGCCATCTTGTCTCAAAGGTACTAACTTGCTTCAAACCAAAACAATTCTCTG 1330
Query 1389 TAGCTGTGCACTCGAGCGTTGG-AGC-GAAC-GCGTACAAGC-CAGAGA-TCACTGTAGA 1443
||||||| ||||||| ||| || | | ||| || ||| | | | | | || |||| ||
Sbjct 1331 TAGCTGTCCACTCGACCGT-GGCA-CAGAAGAGC-TACGA-CTCTG-GTCTCTCTGTGGA 1385
Query 1444 CTTGGAAGACTATGGGTGCAGAGAGAGGACATTTGAGTCTCTAGGAGAAGAGAGTGGAAC 1503
| | || || || || |||| |||| ||| | |||||||||||||||||||| |||||
Sbjct 1386 CCTAGACGATTACGGATGCAAAGAGTCAACAATGGAGTCTCTAGGAGAAGAGAGAGGAAC 1445
Query 1504 AGTGATGTATCAGACGTTTGAGAAGCTTGGTAAG-TACTGTGGATCGCCTAGATCTACCT 1562
|||||||||||||| |||||||||||| || ||| || ||||| || || ||||||||||
Sbjct 1446 AGTGATGTATCAGAGGTTTGAGAAGCTAGG-AAGGTATTGTGGTTCTCCGAGATCTACCT 1504
Query 1563 TGAAGTGTGAATGGAGCAGCAACAATAGCTGCAGCAGCGAGGACGAGAAGGACGAGGGAA 1622
|||| ||||| ||||||||||||| |||||||| |||||||||||||||||| ||||||
Sbjct 1505 TGAAATGTGAGTGGAGCAGCAACAGTAGCTGCAACAGCGAGGACGAGAAGGAATAGGGAA 1564
Query 1623 TCTA 1626
||||
Sbjct 1565 TCTA 1568
Score = 248 bits (134), Expect = 1e-64
Identities = 168/185 (91%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 196 AAAAGCGTGAATGAGATTATGATGGAGTCGAAAGGTGGTAAAAAGAAGTCCAGCAGTAGT 255
|||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||| | |
Sbjct 177 AAAAGCGTGAATGAGATTATGATGGAATCGAAAGCTGGTAATAAGAAGTCAAGCAGCAAT 236
Query 256 AGTTCCTTATTTTACGAAGCTCCCCTCGGTTACAGCATTGAAGACGTTCGTCCAAACGGT 315
|||||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct 237 AGTTCCTTATGTTACGAAGCACCCCTTGGTTACAGCATTGAAGACGTTCGTCCTTTCGGT 296
Query 316 GGAATCAAGAAATTCAAATCTTCTGTCTACTCTAACTGCTCCAAGAGGCCATCCTGAGTA 375
|||||||||||||||||||||||||||||||| |||||| | |||||||| |||||||||
Sbjct 297 GGAATCAAGAAATTCAAATCTTCTGTCTACTCCAACTGCGCTAAGAGGCCTTCCTGAGTA 356
Query 376 CCAGC 380
| |||
Sbjct 357 CTAGC 361
> AT5G15950.1 | Symbols: | Adenosylmethionine decarboxylase family
protein | chr5:5205869-5207987 FORWARD LENGTH=1750
Length=1750
Score = 835 bits (452), Expect = 0.0
Identities = 924/1144 (81%), Gaps = 64/1144 (6%)
Strand=Plus/Plus
Query 514 ACAACAAGGC-GAGATGGCCTTATCTGCAATCGGTTTCGAAGGTTACGAGAAACGGCTCG 572
||||||| || ||||||||| | ||||| || || ||||||||||||||||| ||||| |
Sbjct 455 ACAACAACGCAGAGATGGCCATGTCTGCTATTGGCTTCGAAGGTTACGAGAAGCGGCTTG 514
Query 573 AGGTTACTTTCTTTGAGCCAAG-CATCTTTCAAGACTC-CAAGGGACTGGGACTCCGTGC 630
| ||||||||||||||||| | | |||||| ||| | ||||| | ||| || |||||
Sbjct 515 AAGTTACTTTCTTTGAGCCTGGTC-TCTTTCTTGACACTCAAGGAAAAGGG-CTACGTGC 572
Query 631 TCTTACC-AAGTCCCAGCTTGATGAAATTCTTACA-CCTGCTGCA-TGCACGATCGTTTC 687
| ||| | ||||| ||| | ||||| |||||| || || |||| | ||||| ||||| ||
Sbjct 573 T-TTAGCTAAGTCTCAGATCGATGAGATTCTT-CAGCCAGCTG-AGTGCACTATCGTCTC 629
Query 688 TTCTCTCTCCAACGATCAA-TTGGACTCTTACGTACTCTCTGAGTCCAG-CTTCTTTGTC 745
|||||||| |||||||| ||| ||||||| || |||||||||||||| || |||| ||
Sbjct 630 ATCTCTCTCGAACGATCAGCTTG-ACTCTTATGTTCTCTCTGAGTCCAGTCT-CTTTATC 687
Query 746 TACCCCTACAA-AGTCATCATCAAGACTTGCGGTACCACGAAGCTCCTCCTCTCTATCCC 804
| ||| ||||| | || ||||||||||||||||||| || |||||||||||||||||
Sbjct 688 TTCCCGTACAAGA-TCGTCATCAAGACTTGCGGTACTACTAAGCTCCTCCTCTCTATTG- 745
Query 805 A-CCACTTCTAAAGCTG-GCTGGTGAGCTCTCT-TTGA-GTGTCAAGTCTGTGAAGTACA 860
| || || || || | || |||||||| ||| |||| || | ||| |||||| |||||
Sbjct 746 AGCCTCT-CTTGAGGTTAGCCGGTGAGCTTTCTCTTGACGT-T-AAGGCTGTGAGGTACA 802
Query 861 CTCGTGGCTCCTTCCTCTGCCCCGGAGGCCAGCCTTTCCCTCACCGCAGCTTCTCTGAAG 920
||||||| |||||||| || ||||| || || ||||||||||||| |||||||||||
Sbjct 803 CTCGTGGAAGTTTCCTCTGTCCTGGAGGACAACCATTCCCTCACCGCAACTTCTCTGAAG 862
Query 921 AAGTCTCTGTTCTTGATGGGCACTTTACTCAGCTGGGCTTGAA-CAGCGTAGCCTACTTG 979
||||||||||||||||||| |||||| || |||| || || || ||| || |||||||||
Sbjct 863 AAGTCTCTGTTCTTGATGGTCACTTTGCTAAGCTTGGTTT-AAGCAGTGTTGCCTACTTG 921
Query 980 ATGGGCAATGATGATGAGACTAAGAAATGGCATGTCTA-TGCTGC--CT-CTGCCCAGGA 1035
||||||||||| ||||| || |||||||||||||| || | |||| || ||||| | |
Sbjct 922 ATGGGCAATGACGATGAAACCAAGAAATGGCATGTTTACT-CTGCTTCTTCTGCC-A--A 977
Query 1036 CTCCAGCAACTGCAACAACAATGTCTACACTCTCGAGATGTGCATGACTGGTCTGGACAG 1095
| |||||| ||| |||||||||||||| || |||||||| ||||||||||| ||||
Sbjct 978 C---AGCAACAACAAGAACAATGTCTACACGCTTGAGATGTGTATGACTGGTCTAGACAA 1034
Query 1096 AGAGAAAGCTTCTGTCTTCTACAAGAACGAAGCTGACAAAA-CTG--GGT-CAATGACTG 1151
||| || || |||||||||||||||||||| | | ||| ||| ||| | |||||||
Sbjct 1035 AGACAAGGCATCTGTCTTCTACAAGAACGA-G-T--CAAGCTCTGCTGGTTCTATGACTG 1090
Query 1152 ACAACTCTGGAATCCGAAAGATCCTTCCCCAGTCCCAGATCTGCGACTTTGAATTCGAGC 1211
| |||||||| ||| ||||||| || || || ||||| ||||| |||||||| || ||||
Sbjct 1091 ATAACTCTGGCATCAGAAAGATACTGCCTCAATCCCAAATCTGTGACTTTGAGTTTGAGC 1150
Query 1212 CCTGTGGCTACTCTATGAACT-CAATTGAAGGGGATGCAATCTCCACGATCCATGTGACC 1270
||||||||||||| |||||| || | ||||| || |||||||| || |||||||| ||
Sbjct 1151 CCTGTGGCTACTCAATGAACAGCA-TCGAAGGCGACGCAATCTCTACCATCCATGTAACT 1209
Query 1271 CCTGAAGATGGGTTT-AGCTACGCTAGCTTTGAAGCTGTGGGTTACGACTTCAACA-CTA 1328
|| || ||||| ||| |||||||||||||||||||| ||||| || || |||| || | |
Sbjct 1210 CCAGAGGATGG-TTTCAGCTACGCTAGCTTTGAAGCAGTGGGATATGATTTCA-CAACCA 1267
Query 1329 TTGACCTGAGCCAGCTGGTGACAAGGGTACTCTCTTGCTTCGAGCCCAAGCAATTCTCTG 1388
| ||| ||||||| || || ||| |||||| |||||||| | || || ||||||||||
Sbjct 1268 TGGACTTGAGCCATCTTGTCTCAAAGGTACTAACTTGCTTCAAACCAAAACAATTCTCTG 1327
Query 1389 TAGCTGTGCACTCGAGCGTTGG-AGC-GAAC-GCGTACAAGC-CAGAGA-TCACTGTAGA 1443
||||||| ||||||| ||| || | | ||| || ||| | | | | | || |||| ||
Sbjct 1328 TAGCTGTCCACTCGACCGT-GGCA-CAGAAGAGC-TACGA-CTCTG-GTCTCTCTGTGGA 1382
Query 1444 CTTGGAAGACTATGGGTGCAGAGAGAGGACATTTGAGTCTCTAGGAGAAGAGAGTGGAAC 1503
| | || || || || |||| |||| ||| | |||||||||||||||||||| |||||
Sbjct 1383 CCTAGACGATTACGGATGCAAAGAGTCAACAATGGAGTCTCTAGGAGAAGAGAGAGGAAC 1442
Query 1504 AGTGATGTATCAGACGTTTGAGAAGCTTGGTAAG-TACTGTGGATCGCCTAGATCTACCT 1562
|||||||||||||| |||||||||||| || ||| || ||||| || || ||||||||||
Sbjct 1443 AGTGATGTATCAGAGGTTTGAGAAGCTAGG-AAGGTATTGTGGTTCTCCGAGATCTACCT 1501
Query 1563 TGAAGTGTGAATGGAGCAGCAACAATAGCTGCAGCAGCGAGGACGAGAAGGACGAGGGAA 1622
|||| ||||| ||||||||||||| |||||||| |||||||||||||||||| ||||||
Sbjct 1502 TGAAATGTGAGTGGAGCAGCAACAGTAGCTGCAACAGCGAGGACGAGAAGGAATAGGGAA 1561
Query 1623 TCTA 1626
||||
Sbjct 1562 TCTA 1565
Score = 248 bits (134), Expect = 1e-64
Identities = 168/185 (91%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 196 AAAAGCGTGAATGAGATTATGATGGAGTCGAAAGGTGGTAAAAAGAAGTCCAGCAGTAGT 255
|||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||| | |
Sbjct 174 AAAAGCGTGAATGAGATTATGATGGAATCGAAAGCTGGTAATAAGAAGTCAAGCAGCAAT 233
Query 256 AGTTCCTTATTTTACGAAGCTCCCCTCGGTTACAGCATTGAAGACGTTCGTCCAAACGGT 315
|||||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct 234 AGTTCCTTATGTTACGAAGCACCCCTTGGTTACAGCATTGAAGACGTTCGTCCTTTCGGT 293
Query 316 GGAATCAAGAAATTCAAATCTTCTGTCTACTCTAACTGCTCCAAGAGGCCATCCTGAGTA 375
|||||||||||||||||||||||||||||||| |||||| | |||||||| |||||||||
Sbjct 294 GGAATCAAGAAATTCAAATCTTCTGTCTACTCCAACTGCGCTAAGAGGCCTTCCTGAGTA 353
Query 376 CCAGC 380
| |||
Sbjct 354 CTAGC 358
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83583907425
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5