BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477494 Length=1491 Score E Sequences producing significant alignments: (Bits) Value AT3G02570.1 | Symbols: MEE31, PMI1 | Mannose-6-phosphate isomer... 2283 0.0 > AT3G02570.1 | Symbols: MEE31, PMI1 | Mannose-6-phosphate isomerase, type I | chr3:543346-545595 REVERSE LENGTH=1533 Length=1533 Score = 2283 bits (1236), Expect = 0.0 Identities = 1399/1475 (95%), Gaps = 22/1475 (1%) Strand=Plus/Plus Query 1 GTAAAGAGAAAAGCTTTGAGTCTTCCAATTGACATGGGCGCTTAGCTTATTCTACTTGAG 60 |||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| Sbjct 1 GTAAAGAGAAAAGCTTTGAGTCTTCC-ATTGACATGGGCGCTTAGCTTA---TGCTTGAG 56 Query 61 ATA--TT-TATTTCCCTCCGAGACACGGATTTAGATTCGTAATCGTGAG--TTTTGGTGT 115 ||| || | ||| ||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 57 ATATTTTGTTTTTACCTCCGAGAAACGGATTTAGATTCGTAATCGTGAGTTTTTTGGTGT 116 Query 116 AATGGAGATCGCTACTGTCGTTAAGGCTAATGGCGGTTGTGAAGCGGATCGACGACGGCT 175 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 117 AATGGAGATCGCTACTGTCGTAAAGGCTAATGGCGGTTGTGAAGCGGATCGACGACGGCT 176 Query 176 TCGCCGATTGAGATGCTCCGTTAAGGATTACGATTGGGGCAAAATTGGATCGGATTCACT 235 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 177 TCGCCGATTGAGATGCTCTGTTAAGGATTACGATTGGGGCAAAATTGGATCGGATTCACT 236 Query 236 CGTTTACAGGGTTTATGCGGCTAACTCTGATGACCAGATCGATCCTACACGACCTTACGC 295 ||||||||||||||||||||| || || ||| || ||||||||||||||||||||||||| Sbjct 237 CGTTTACAGGGTTTATGCGGCGAATTCAGATTACGAGATCGATCCTACACGACCTTACGC 296 Query 296 CGAGCTTTGGATGGGGACTCACGAGTCCGGTCCGAGTTACTTGGAGGATGCTGATGGATC 355 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 297 CGAGCTATGGATGGGGACTCACGAGTCTGGTCCGAGTTACTTGGAGGATGCTGATGGATC 356 Query 356 CAACGGCGTTACCCTTAGATCGTGGATCACCGAAAACCCTAAATCTCTTGGAGATAGGGT 415 ||| ||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 357 CAATGGCGTGACCCTTAGATCCTGGATCACCGAAAACCCTAAATCTCTTGGAAATAGGGT 416 Query 416 TTTGGAGAAATGGGGTTGCGATCTCCCATTTCTGTTCAAGGTGTTGTCGGTGGCAAGGCC 475 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 417 TTTGGAGAAATGGGGTTGCGATCTCCCCTTTCTGTTCAAGGTGTTGTCGGTGGCAAGGCC 476 Query 476 CTTGTCGATTCAAGCACATCCGGACAAGAAATTAGCAAAGAAAATGCACAAAGCTCATCC 535 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 477 GTTGTCGATTCAAGCACATCCAGATAAGAAATTAGCAAAGAAAATGCACAAAGCTCATCC 536 Query 536 TAATCTTTATAAAGATGACAATCACAAACCAGAGATGGCTTTGGCCTATACTCAATTCGA 595 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 TAATCTTTATAAAGACGACAATCACAAACCAGAGATGGCTTTGGCCTATACTCAATTCGA 596 Query 596 GGCTCTGTGTGGCTTTATACCTCTTCAGGAGCTTAAGAGTGTCATTCAAGCTATTCCGGA 655 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 597 GGCTCTCTGTGGCTTTATACCTCTTCAGGAGCTTAAGAGTGTCATTCGAGCTATTCCGGA 656 Query 656 GATTGAGGAACTTGTTGGGAGTGAAGAAGTAAACCAAGTTTTCTGCATCAGTGAACATGA 715 |||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||||| Sbjct 657 GATTGAAGAACTTGTTGGGAGTGAAGAAGCAAACCAAGTTTTCTGTATCACTGAACATGA 716 Query 716 TGAGGAAAAAGTGAAATCTGTTGTCCGAACAATCTTCACCCTGCTAATGTCTGCAGATC- 774 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 717 TGAGGAAAAAGTGAAATCTGTTGTCCGAACAATCTTCACCCTGCTAATGTCTGCTGA-CG 775 Query 775 CAGATACAACAAAGAAAATCGTATCCAAACTAAAACGCCGTCTGCATATGGAGAGTCAGG 834 | ||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct 776 CCGATACAACAAAGAAAATTGTATCCAAATTAAAACGCCGACTGCATATGGAGAGTCAGG 835 Query 835 AACGCCAACTGACAGACAAGGAACGGCTGGTTTTGAAGCTAGAGAAGCAATATCCAAATG 894 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 836 AACGCCAATTGACAGACAAGGAACGGCTGGTTTTGAAGCTAGAGAAGCAATATCCAAATG 895 Query 895 ATATTGGAGTCATATCTGCTTTCTTCTTCAACTATGTGAAGCTCAATCCTGGCGAAGCCT 954 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 896 ATATTGGAGTGATATCTGCATTCTTCTTCAACTATGTGAAGCTCAATCCTGGCGAAGCCT 955 Query 955 TGTACCTCGGTGCAAACGAGCCCCACGCATACTTATTCGGTGAGTGCCTTGAGGTCATGG 1014 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 956 TGTATCTTGGTGCAAACGAGCCCCACGCATACTTATTCGGTGAGTGCCTTGAGGTCATGG 1015 Query 1015 CGACTTCAGACAATGTAGTACGAGCCGGCCTCACTTCCAAGCCGT-TGGATATTCAAACA 1073 ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| Sbjct 1016 CGACTTCAGACAATGTAGTACGAGCTGGCCTCACTTCCAAGCC-TCTGGATATTCAAACA 1074 Query 1074 CTTTGTTCCATGCTCTCATATACACTGGGATATCCGGAAATCCTAAAGGGATCAAGGATT 1133 |||||||| |||||||| |||| ||||||||||||||||||||| |||||| |||||||| Sbjct 1075 CTTTGTTCAATGCTCTCTTATAAACTGGGATATCCGGAAATCCTGAAGGGAACAAGGATT 1134 Query 1134 CGACCATACATCACAAGATACCTCCCGCCTTTCGAAGAGTTTGAAGTTGATCTGTGTGAT 1193 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1135 CGACCATACATAACAAGATACCTGCCGCCTTTCGAAGAGTTTGAAGTTGATCTGTGTGAT 1194 Query 1194 CTTCCCAGTGGTGCCTCGACAGTGTTTCCATCTGTTCCAGGCCCTTCTCTTCTGCTTGTA 1253 ||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1195 CTTCCCAGTGGAGCCTCGACGGTGTTTCCCTCTGTTCCAGGCCCTTCTCTTCTGCTTGTA 1254 Query 1254 CTCCAAGGTGAAGGAAGAATGTCTACAGAAGCATCAGCAGATGGGATTTCAATGGGAGAT 1313 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1255 CTCCAAGGTGAAGGAAGAATGTCTACAGAAGCATCAGCCGATGGGATTTCAATGGGAGAT 1314 Query 1314 GTTTTATTTGTGCCTGCAGATACCGAGATTCACTTGAGGTCATCATCTGACTTGAAGTTG 1373 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1315 GTTTTATTTGTTCCTGCAGATACCGAGATTCACTTGAGGTCTTCATCTGACTTGAAGTTG 1374 Query 1374 TACAGAGCAGGAATCAACAGTAGGTTTTTGTATCCTCTATAGTCAAA-CTACACACAGTA 1432 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct 1375 TACAGAGCAGGAATCAACAGTAGGTTTTTGTTTCCTCTATAGTCAAAACTACACA--GTA 1432 Query 1433 CACAACACATGTTTGTTTTTCTTTCAGTTATTGTA 1467 ||||| | |||||| |||| | ||||||||||| Sbjct 1433 CACAA-A--TGTTTGCTTTT-T--CAGTTATTGTA 1461 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73543798425 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5