BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477504 Length=1635 Score E Sequences producing significant alignments: (Bits) Value AT3G02630.1 | Symbols: | Plant stearoyl-acyl-carrier-protein d... 2377 0.0 AT5G16240.1 | Symbols: | Plant stearoyl-acyl-carrier-protein d... 1158 0.0 > AT3G02630.1 | Symbols: | Plant stearoyl-acyl-carrier-protein desaturase family protein | chr3:562030-564870 FORWARD LENGTH=1671 Length=1671 Score = 2377 bits (1287), Expect = 0.0 Identities = 1461/1542 (95%), Gaps = 23/1542 (1%) Strand=Plus/Plus Query 1 CCCAAAGCTTCTGCTTCACATTGTCTCTTTTCACAGTCT--CAGAGCATAGAAATAATCG 58 ||||||| |||| |||||| ||||||||||||||||||| || |||||||||||||||| Sbjct 1 CCCAAAGTTTCTTCTTCACCTTGTCTCTTTTCACAGTCTCACACAGCATAGAAATAATCG 60 Query 59 AAAGTTTGTCTTTTTAAAATCTGGGATTTGCttttttttttGTTCATTGATCATCTTCGA 118 |||| || |||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 61 AAAGATT-TCTTTTTAAAATCTGGGATTTG---TTTTTTTTGTTCATTGATCATTTTCGA 116 Query 119 TTGTTGGAGAAGaaaaaaaTGGCGATGGCTATGGATCGGATCGTCTTCTCCCCTTCATCT 178 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 117 TTGTTAGAGAAGAATCAAATGGCGATGGCTATGGATCGGATCGTCTTCTCCCCTTCATCT 176 Query 179 TACGTCTATCGTCCTTGTCAAGTTAGGGGATCCAGATCTTCTAGAGTTTCCATGGCTTCT 238 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct 177 TACGTCTATCGTCCTTGTCAAGCTAGGGGATCCAGATCTTCCAGAGTTTCCATGGCTTCT 236 Query 239 ACGATTCGCTCTGCTACTACAGAGGTTACGAATGGAAGGAAACTGTATATCCCTCCTAGA 298 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 237 ACGATTCGCTCTGCGACTACAGAGGTTACGAATGGAAGGAAACTGTATATCCCTCCCAGA 296 Query 299 GAGGTGCATGTTCAAGTGAAACATTCAATGCCGCCACAAAAGTTGGAGATCTTCAAGTCT 358 ||||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct 297 GAGGTGCATGTCCAAGTCAAACATTCAATGCCGCCACAAAAGTTAGAGATCTTTAAGTCT 356 Query 359 TTAGAAGGATGGGCTGATGAAACCCTGTTGACTTATTTAAAGCCTGTTGAGAAATCGTGG 418 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 357 TTAGAAGGATGGGCTGATGAAACCCTGTTGACTTATTTAAAACCTGTTGAGAAATCGTGG 416 Query 419 CAGCCTACCGATTTTCTTCCCGAACCTGAGTCAGAAGGATTTTATGACCAAGTCAAGGAG 478 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 417 CAGCCTACCGATTTTCTTCCCGAACCTGAGTCGGAAGGATTCTATGACCAAGTCAAGGAG 476 Query 479 TTAAGGGAAAGGTGTAAGGAACTTCCTGATGACTATTTTGTGGTGCTTGTTGGGGATATG 538 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 477 CTAAGGGAAAGGTGCAAGGAACTTCCTGATGACTATTTTGTGGTGCTTGTTGGGGATATG 536 Query 539 ATCACTGAAGAAGCACTTCCTACGTACCAGACGATGTTGAACACATTGGATGGTGTTAGG 598 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 537 ATCACTGAAGAAGCACTTCCTACTTACCAGACCATGTTGAACACATTGGATGGTGTTAGG 596 Query 599 GATGAGACAGGTGCAAGTCCTACTCCATGGGCTATTTGGACCAGGGCTTGGACTGCTGAG 658 ||||||||||| || ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 597 GATGAGACAGGAGCTAGTCCTACTCCTTGGGCTATATGGACCAGGGCTTGGACTGCTGAG 656 Query 659 GAGAATAGACATGGGGATCTTCTTAACAAGTATCTTTATTTGTCTGGTCGAGTAGACATG 718 |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| Sbjct 657 GAGAATAGACATGGGGATCTCCTTAACAAGTATCTTTATCTGTCTGGTCGGGTAGACATG 716 Query 719 AGGCAGATTGAAAAGACAATTCAGTACCTGATTGGGTCTGGAATGGATCCAAAAACTGAA 778 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 717 AGGCAGATTGAAAAGACTATTCAGTACCTGATTGGTTCTGGAATGGATCCAAAAACTGAA 776 Query 779 AATAATCCTTACTTGGGTTTCATCTACACATCCTTTCAAGAAAGAGCGACCTTCATCTCC 838 || || |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 777 AACAACCCTTACTTGGGTTTCATCTACACATCATTTCAAGAAAGAGCGACCTTCATCTCC 836 Query 839 CATGGAAACACTGCCAGACTGGCGAAAGATCGTGGAGATTTGAAACTTGCGCAGATATGC 898 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 837 CATGGAAACACTGCCAGACTGGCGAAAGATCGTGGAGATTTGAAACTTGCGCAGATATGC 896 Query 899 GGGACCATTGCTGCTGATGAGAGGCGTCATGAGACTGCTTACACCAAGATTGTGGAGAAG 958 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 897 GGGACCATTGCTGCTGATGAGAGGCGTCATGAGACTGCTTACACCAAGATTGTAGAGAAG 956 Query 959 CTCTTTGAAATTGACCCTGATGGCACGATCTTGGGCTTGGCTGATATGATGAAGAAAAAG 1018 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 957 CTCTTTGAAATTGACCCTGATGGCACGATCTTGGGCCTGGCTGATATGATGAAGAAAAAG 1016 Query 1019 ATCTCAATGCCTGCACATTTAATGTATGATGGCCAAGATGATAACCTGTTTGAGCACTTC 1078 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1017 ATATCAATGCCTGCACATTTAATGTATGATGGCCAAGATGATAACCTGTTTGAGCACTTC 1076 Query 1079 TCAACTGTTGCCCAGAGGCTTGGTGTCTACACCGCCAAGGACTATGCTGATATTCTGGAG 1138 ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 1077 TCAACCGTTGCCCAGAGGCTCGGTGTCTACACTGCCAAGGACTATGCTGATATTCTGGAG 1136 Query 1139 TTTCTTGTTGAACGGTGGAATGTGGAGACTTTGTCAGGCCTTTCTAGTGAAGGACACAGG 1198 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct 1137 TTTCTTGTTGAACGGTGGAATGTGGAGACTTTGACAGACCTTTCTAGTGAAGGACACAGG 1196 Query 1199 GCTCAGGACTTTGTCTGCGGACTTCCTGCAAGAATCCGCAAAATTGAAGAGAGAGCTCAA 1258 || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1197 GCCCAGGACTTTGTCTGCGGACTACCTGCAAGAATCCGTAAAATTGAAGAGAGAGCTCAA 1256 Query 1259 GGAAGAGCCAAAGAAGCAGCCAAAAACATACCATTCAGCTGGATTTTTGGTAGAAATATT 1318 ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||| Sbjct 1257 GGAAGAGCCAAAGAAGCTGCCAAAAACATACCATTCAGCTGGATATTTGGTCGAAATATC 1316 Query 1319 AGGGCTTAAAAAGTTTACTACACAATTCTCCTCTTTCGCACT-ATCCCAAGTAAGCCATA 1377 ||||||||| |||||||||||||||||||| | || | || | |||||||||||| |||| Sbjct 1317 AGGGCTTAAGAAGTTTACTACACAATTCTC-T-TT-C-CAATTATCCCAAGTAAGTCATA 1372 Query 1378 AAGGTCTTCACCAACCATCTCACCAATGAAGTACCAGTTTT-AAGACCACGAAAGTTCAT 1436 |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 1373 AAGGTCTTCACCAACCATTTCACCAATGAAGGACCAGTTTTTAAGACCACGAAAGTTCAT 1432 Query 1437 T-GAATATGTTTTGTACTTTTGTTTTTTACATGGAACATTGTAGATAAAGTTATGTGGTT 1495 | |||| || || ||| ||||| ||| |||||||||||||||||||||||||||| Sbjct 1433 TTGAAT--GT---GT--TTT-GTTTTATAC--GGAACATTGTAGATAAAGTTATGTGGTT 1482 Query 1496 AGGTTATGTTTCTTGGTTGAATCAGTCAAGACCAAAGAAAAT 1537 ||||||||||||||| |||||||||||||||||||||||||| Sbjct 1483 AGGTTATGTTTCTTGTTTGAATCAGTCAAGACCAAAGAAAAT 1524 > AT5G16240.1 | Symbols: | Plant stearoyl-acyl-carrier-protein desaturase family protein | chr5:5306807-5309932 FORWARD LENGTH=1652 Length=1652 Score = 1158 bits (627), Expect = 0.0 Identities = 925/1069 (87%), Gaps = 20/1069 (2%) Strand=Plus/Plus Query 271 TGGAAGGAAACTGTATATCCCTCCTAGAGAGGTGCATGTTCAAGTGAAACATTCAATGCC 330 |||||||||||||||||| |||||| ||||||| ||| |||||||||| |||||||||| Sbjct 303 TGGAAGGAAACTGTATATTCCTCCTCGAGAGGTTCATCTTCAAGTGAAGTATTCAATGCC 362 Query 331 GCCACAAAAGTTGGAGATCTTCAAGTCTTTAGAAGGATGGGCTGATGA-AACCCTGTTGA 389 ||||||||| ||||||| |||||||| ||||||||||||||| |||| || | ||||| Sbjct 363 ACCACAAAAGCTGGAGATTTTCAAGTCCTTAGAAGGATGGGCTAATGACAA-CTTGTTGG 421 Query 390 CTTATTTAAAGCCTGTTGAGAAATCGTGGCAGCCTACCGATTTTCTTCCC-GAACCTGAG 448 |||| ||||| |||||||||||||| ||||| || || ||||||| |||| ||||||||| Sbjct 422 CTTACTTAAAACCTGTTGAGAAATCATGGCAACCAACTGATTTTC-TCCCTGAACCTGAG 480 Query 449 TCAGAAGGATTTTATGACCAAGTCAAGGAGTTAAGGGAAAGGTGTAAGGAACTTC-CTGA 507 ||||||||||| ||||||||||| ||||||||||| |||||||||||||| | || |||| Sbjct 481 TCAGAAGGATTCTATGACCAAGTTAAGGAGTTAAGAGAAAGGTGTAAGGAGC-TCTCTGA 539 Query 508 TGACTATTTTGTGGTGCTTGTTGGGGATATGATCACTGAAGAAGCACTTCCTACGTACCA 567 |||||| || | ||||||||||| ||||||||||| || ||||||||||| || || || Sbjct 540 TGACTACCTTATAGTGCTTGTTGGTGATATGATCACAGAGGAAGCACTTCCGACTTATCA 599 Query 568 GACGATG-TTGAACACATTGGATGGTGTTAGGGATGAGACAGGTGCAAGTCCTACTCCAT 626 ||| ||| || || |||||||| || ||||| |||||||| || |||||||| ||||| | Sbjct 600 GACCATGATT-AATACATTGGACGGGGTTAGAGATGAGACGGGAGCAAGTCCAACTCCTT 658 Query 627 GGGCTA-TTTGGACCAGGGCTTGGACTGCTGAGGAGAATAGACATGGGGATCTTCTTAAC 685 |||| | | ||||| ||||| |||||||| || |||||||||||||| |||||||||||| Sbjct 659 GGGC-AGTATGGACTAGGGCATGGACTGCGGAAGAGAATAGACATGGTGATCTTCTTAAC 717 Query 686 AAGTATCTTTATTTGTCTGGTCGAGTAGACATGAGGCAGATTGAAAAGACAATTCAGTAC 745 ||||| |||||| ||||||| |||||||||||||| ||||||||||| || ||||| ||| Sbjct 718 AAGTACCTTTATCTGTCTGGACGAGTAGACATGAGACAGATTGAAAAAACTATTCAATAC 777 Query 746 CTGATTGGGTCTGGAATGGATCCAAAAACTGAAAATAATCCTTACTTGGGTTTCATCTAC 805 || ||||| |||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct 778 CTCATTGGTTCTGGAATGGATCCAAAAACTGAAAACAATCCTTACTTGGGATTCATATAT 837 Query 806 ACATCCTTTCAAGAAAGAGCGACCTTCATCTCCCATGGAAACACTGCCAGACTGGCGAAA 865 || || |||||||||||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct 838 ACTTCTTTTCAAGAAAGAGCTACATTCATCTCCCATGGAAACACTGCTAGACTGGC-AAA 896 Query 866 -GATCGTGGAGATTTGAAACTTGCGCAGATATGCGGGACCATTGCTGCTGATGAGAGGCG 924 |||| |||||| |||| ||||| | |||| || || ||||||||||||||||||||||| Sbjct 897 GGATCTTGGAGACTTGACACTTGGGAAGATTTGTGGCACCATTGCTGCTGATGAGAGGCG 956 Query 925 TCATG-AGACTGCTTACACCAAGATTGTGGAGAAGCTCTTTGAAATTGACCCTGATGGCA 983 |||| | || || |||||||||||||| |||||||||||||||||||| |||||| || Sbjct 957 CCATGAACAC-GCCTACACCAAGATTGTAGAGAAGCTCTTTGAAATTGATCCTGATACCA 1015 Query 984 CGA-TCTTGGGCTTGGCTGATATGATGAAGAAAAAGATCTCAATGCCTGCACATTTAATG 1042 | | || ||||||| ||||| ||||||| |||||||||||| |||||||| ||||| ||| Sbjct 1016 C-AGTCGTGGGCTTTGCTGACATGATGAGGAAAAAGATCTCGATGCCTGCTCATTTGATG 1074 Query 1043 TATGATGGCCAAGATGATAACCTGTTTGAGCACTTCTCAACTGTTGCCCAGAGGCTTGGT 1102 |||||||| | |||||||| || ||||| |||||||| | || ||||||||||||||| Sbjct 1075 TATGATGGTCGTGATGATAATCTATTTGATCACTTCTCGTCCGTGGCCCAGAGGCTTGGT 1134 Query 1103 GTCTACACCGCCAAGGACTATGCTGATATTCTGGAGTTTCTTGTTGAACGGTGGAATGTG 1162 |||||||| |||||||||||||||||||| ||| | |||||| ||| ||||||||||| Sbjct 1135 GTCTACACTGCCAAGGACTATGCTGATATACTGCAACATCTTGTGGAAAGGTGGAATGTG 1194 Query 1163 GAGACTTTGTCAGGCCTTTCTAGTGAAGGACACAGGGCTCAGGACTTTGTCTGCGGACTT 1222 |||| ||||||| |||||||||||||||| ||||||| ||||||| |||| ||| || Sbjct 1195 GAGAAGTTGTCAGACCTTTCTAGTGAAGGAAACAGGGCCCAGGACTACCTCTGTGGA-TT 1253 Query 1223 -CCTGCAAGAATCCGCAAAATTGAAGAGAGAGCTCAAGGAAGAGCCAAAGAAGCAGCCAA 1281 ||||| |||||||||||| |||||||||| |||||||| ||| ||||||||||||| || Sbjct 1254 ACCTGCTAGAATCCGCAAACTTGAAGAGAGGGCTCAAGGGAGAACCAAAGAAGCAGCAAA 1313 Query 1282 AAACATACCATTCAGCTGGATTTTTGGTAGAAATATT-AGGGCTTAAAA 1329 |||||||||||||||||||||||||||| || | | | ||||||||||| Sbjct 1314 AAACATACCATTCAGCTGGATTTTTGGTCGAGA-AGTCAGGGCTTAAAA 1361 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80772676905 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5