BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477535
Length=2910
Score E
Sequences producing significant alignments: (Bits) Value
AT3G02890.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily... 2207 0.0
AT5G16680.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily... 492 9e-138
> AT3G02890.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:640276-645692 FORWARD LENGTH=3515
Length=3515
Score = 2207 bits (1195), Expect = 0.0
Identities = 1392/1484 (94%), Gaps = 26/1484 (2%)
Strand=Plus/Plus
Query 1411 GTGGGGGATTCATCTAAAAATGAAAAGTGTAGTTCAAGCGAGCAAATATCAAGTGAAGCG 1470
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1651 GTGGGGGATTCATCTAAGAATGAAAAGTGTAGTTCAAGTGAGCAAATATCAAGTGAAGCG 1710
Query 1471 AAATGTAAAGATGAACTGGCACATGTAGATGGTTTACCTCGGTCGAGGGAATTCAGAGAG 1530
||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||
Sbjct 1711 AAATGTAAAGATGAACTGGCACAAGTAGATGGTGTACCCCGGTCGAGGGAATTCAGAGAG 1770
Query 1531 GCGGGGGAGAAAAGCAAAGATGCTGTTGGTAATCACCAAAAGCAAAATATTAGCGAGGAT 1590
||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 1771 GCGGGGGAGAAAACCAAAGATGCTGTTGGTAATCACCAAAAGCGAAATATTGGCGAGGAT 1830
Query 1591 ATTAATAAGGGCAATAGGTTGCGAGCAGCGGTTGATGCTGCACTGCGTAAAAAACCCAGC 1650
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1831 AATAATAAGGGCAATAGGTTGCGAGCAGCGGTTGATGCTGCACTGCGAAAAAAACCCAGC 1890
Query 1651 TTTAGCAAAAACAGAGGGTTGGAGCAATCTGATTTGCCTTCAGTGTCTAATGTGGATTCC 1710
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1891 TTTAGCAAAAACAGAGGGTTGGAGCAATCTGATTTGCCTCCAGTGTCTAATGTGGATTCT 1950
Query 1711 GGTTGTAATAAGGCTTTAAAAAGTTTACCCTCAAAGGTGCCGGTCATAAGAGATTGGCCT 1770
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 1951 GGTTGTAATAAGGCTTTAAAATGTTTGTCCTCAAAGGTGCCGGTCATAAGAGATTGGCCT 2010
Query 1771 GTGGGATTCCAAGGATTGCCAGGAGGGCATCCAAATTTACGGACAGACAAGCAGACAAAT 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2011 GTGGGATTCCAAGGATTGCCAGGAGGGCATCCAAATTTACGGACAGACAAGCAGACAAAT 2070
Query 1831 GCAGTAAATGAAAACCAGTCTACACTCGCTGGTACTGATGCAATGGCTGCTTCCCAATCT 1890
||||||||||||| |||| ||||||||||||||||||||||| | ||||||||||||||
Sbjct 2071 ACAGTAAATGAAAAGCAGTTTACACTCGCTGGTACTGATGCAACGACTGCTTCCCAATCT 2130
Query 1891 GTTGAGCTTGAAGTTAATTTTCCTTCTGTAAAACCAGTCATGAGAGATTTGCCTGTGGCT 1950
||||||| |||||||| |||||||||| || | ||||||||||||||||||||||||
Sbjct 2131 GTTGAGCCCGAAGTTAACGATCCTTCTGTACAATCGGTCATGAGAGATTTGCCTGTGGCT 2190
Query 1951 GCCCCAAATGTTCTGTCGACAACCTCAGCCATCCCAGAGCATGAGTATATTTGGCAAGGG 2010
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 2191 GCCCCAAATGTTCTGTCGACAACCTCAGCCATCCCAAAGCCTGAGTATATTTGGCAAGGG 2250
Query 2011 GACTTGGAGGTGCAGAAAAGCAGAAATTTATCAGCAATGCATAGTGGAATACAAGCGTAT 2070
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2251 GACTTGGAGGTGCAGAAAAGCAGAAATTTGTCAGCAATGCATAGTGGAATACAAGCGTAT 2310
Query 2071 CTTTCAACCTCAGCATCACCTAAGGTGGTTGAAGTGGTGAAACAATTTCCTGAAAAAGTC 2130
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2311 CTTTCAACCTTAGCTTCACCTAAGGTGGTTGAAGTGGTGAAACAATTTCCTGAAAAAGTC 2370
Query 2131 ACCTTGAATGAAGTACCCAGGCTTAGTTCATGGCCTGCACAGTTTCAAGATACAGGTGCT 2190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2371 ACCTTGAATGAAGTACCCAGGCTTAGTTCATGGCCTGCACAGTTTCAAGATACAGGTGCT 2430
Query 2191 AAGGAACAACATGTGGCTCTTTTCTTCTTTGCCAAGGACATCGAGAGTTATGAGAAAAAT 2250
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2431 AAGGAACAGCATGTGGCTCTTTTCTTCTTTGCCAAGGACATCGAGAGTTATGAGAAAAAT 2490
Query 2251 TATAAGCCTCTGGTAGATAACATGATTCAGAAAGATTTAGCCCTAAAGGGAAGCCTCGAG 2310
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2491 TATAAGCCTCTGGTAGATAACATGATTCAGAAAGATTTAGCCCTAAAGGGAAACCTCGAG 2550
Query 2311 GGTGTTGAGCTTTTGATTTTTGCGTCCAACCAGCTTCCTCAGGATTGCCAGCGCTGGAAC 2370
|| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2551 GGCGTTGAGCTTTTGATATTTGCGTCCAACCAGCTTCCTCAAGATTGCCAGCGCTGGAAC 2610
Query 2371 ATGTTATTTTTCCTTTGGGGTGTATTCCGAGGaaaaaaaGAGAGTTGCTCTAATCCACCC 2430
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2611 ATGTTATTTTTCCTTTGGGGTGTATTCCGAGGAAAAAAAGAGAGTTGCTCTAATCCACCA 2670
Query 2431 AAGAACACACGTCTTCCGGCGTCTTGTGTTTTGCCAAATATGAAGAAAGCTTTTTCTACT 2490
|||||||||| || ||||| |||||||||| ||||||| |
Sbjct 2671 AAGAACACACCCCTCCCGGCATCTTGTGTTTCGCCAAAT----------C---------- 2710
Query 2491 CGTGAGACCTTTCACCATGAGAATCCAAGCAACAGAGAGTCTTTGACTGATCGCACGTCG 2550
|||| ||||||| |||||||||||||||||||| | ||||||||||||||||||| | |
Sbjct 2711 -GTGATACCTTTCGCCATGAGAATCCAAGCAACAAAAAGTCTTTGACTGATCGCACATTG 2769
Query 2551 AACAGAATGCAATCGTGCATGAAGGAGGAGAAAGCTAAAGAGGGTAAAGCGTGCGGTGCC 2610
| ||||||||||||||| |||||||||||| | ||||||||||||||||||||| ||| |
Sbjct 2770 AGCAGAATGCAATCGTGTATGAAGGAGGAGGATGCTAAAGAGGGTAAAGCGTGCAGTGGC 2829
Query 2611 ATTGAGAAGGAGAATGCATTCTCTGTTTCATATGGAGAACGTGGAGTGGCTGAAGAAA-T 2669
| ||||||||||||||||||||||||||||||||||||| ||| ||||| || ||||| |
Sbjct 2830 ACTGAGAAGGAGAATGCATTCTCTGTTTCATATGGAGAAGGTGAAGTGGATGTAGAAACT 2889
Query 2670 CGAGGAAGGAGAGATAGGTGTTAGCCCACACTTGAAGGATGAGAAGACGG--GG-CCTGG 2726
||||||||||||||||||||||||||||| |||||| |||||||||||| || |||||
Sbjct 2890 -GAGGAAGGAGAGATAGGTGTTAGCCCACAGTTGAAGTATGAGAAGACGGCAGGGCCTGG 2948
Query 2727 GACAGTGAAATCCTCCGACATGAACCAGAAAGTGAACGTGGATGATCTGAATAAAGAAGG 2786
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2949 GACAGTGAAATCCGCCGACATGAACCAGAGAGTGAACGTGGATGATCTGAATAAAGAAGG 3008
Query 2787 GTTGTGTGAAGGTCCAGCGAATAAAAAGCTGAAGACAGTTACAGGAGTAGAAACTGGATG 2846
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3009 GCTGTGTGAAGGTCCAGCGAATAAAAAGCTGAAGACAGTTACAGGAGTAGAAACTGGATG 3068
Query 2847 TAGCATTGTCAGGAGGGATACATCTGTTCATAAATTTGCTTCAA 2890
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3069 TAGCATTGTCAGGAGGGATACATCTGTTCATAAATTTGCTTCAA 3112
Score = 2135 bits (1156), Expect = 0.0
Identities = 1332/1418 (94%), Gaps = 8/1418 (1%)
Strand=Plus/Plus
Query 1 ATGGGTCGCAAAAGTCGTCCTAAAATGCAGTCTGGAACTTGTAATGTCTGCTCTGCTCCT 60
|||||||||| | |||||| | |||| |||||||||||||||||||||||||||||||||
Sbjct 172 ATGGGTCGCAGAGGTCGTCTTGAAATACAGTCTGGAACTTGTAATGTCTGCTCTGCTCCT 231
Query 61 TGTTCATCTTGCATGCATCGTAATGCGGAATTTACCAGTTCAAAGTCAGACGAGTCATCA 120
||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||
Sbjct 232 TGTTCATCTTGCATGCATCATAATGCGGAATTTTCCGGTTCAAAGTCAGATGAGTCATCA 291
Query 121 GATGAGAACTCCCATGGTGTAGTGGCGAGCCAGTGTTCTTTCAACGGGGACAATCTTTTG 180
||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 292 GATGAAAACTCCCATGGTGTACTGGCAAGCCAGTGTTCTTTCAACGGGGACAATCTTTTG 351
Query 181 CGTTCTTCTGGGGTTAATGCTCCCGGCAGTTCACATAACACTGCTAGTGAAGCGAGCCAT 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 352 CGTTCTTCTGGGGTTAATGCTCCCGGCAGTTCACATAACACTTCTAGTGAAGCGAGCCAT 411
Query 241 CTGGTTAATTCCAATCGTGATACTTCATCTGAGAATGCTGAGAGTATGGAAATTATAAGA 300
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 412 CTGGTTAATTCCAATCATGATACTTCATCTGAGAATGCTGAGAGTAAGGAAATTATAAGA 471
Query 301 TCTTCTGATATTTCCCATGGCCCAATATTAGATAGGTCTCGCAAAGAGCAAGATTCCATC 360
|||||||||||||||||||||||| ||||||||||| ||| |||||| |||||||||||
Sbjct 472 TCTTCTGATATTTCCCATGGCCCATTATTAGATAGGCCTCACAAAGATCAAGATTCCATG 531
Query 361 ATGGTAGATTCATGTAGTGACCATCAGGCCAGAAGCACTCTAGGGCAGGGAAAAGTCAAG 420
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 532 AAGGTAGATTCATGTAATGACCATCAGGCCAGAAGCACTCTAGGGCAGGGAAAAGTCAAG 591
Query 421 GAAAAGTCAGGAGCAAATAATAACGAAGACAAGAAAAATACTTTAACTGGAAGTTCTAAG 480
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 592 GAAAAGTCAGGAGCAAAGAATAACGAAGAGAAGAAAAATACTTTAACTGGAAGTTCTAAG 651
Query 481 CATTCAGGACCAAGGGTTGGGAAGTCAGGAGAAAATGTTCTCTTAAATAACGCAGATGAA 540
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 652 CATTCAGGACCAAGGGTCGGGAAGTCAGGAGAAAATGTTCTCTTAAATAAGGCAGATGAA 711
Query 541 TCAAACACATCAGCCATGTCTGAGAGTGAGAGTGAAACTGATCCTGAAATGCT-----T- 594
||||||||||| ||||||||||| ||||||||||||| ||||||||||||||| |
Sbjct 712 TCAAACACATCTGCCATGTCTGACAGTGAGAGTGAAAATGATCCTGAAATGCTAGAACTT 771
Query 595 GATGTAAAAGTATGTGATACTTGTGGAGATGCGGGTCGTGAGGATTTACTTGCTATCTGT 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 GATGTAAAAGTATGTGATACTTGTGGAGATGCGGGTCGTGAGGATTTACTTGCTATCTGT 831
Query 655 AGCAGATGCAGTGATGGGGCAGAACACACCTATTGCATGCGAGTAATGCTTAAAAAAGTT 714
|| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 832 AGTAGATGCAGTGATGGTGCAGAACACACCTATTGTATGCGAGTAATGCTTAAAAAAGTT 891
Query 715 CCTAAGGGTTATTGGCTTTGTGAAGAATGCAAGTTTGCTGAGGAAGCAGAAAAGCAGAAG 774
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||
Sbjct 892 CCTAAGGGTTATTGGCTTTGTGAAGAGTGCAAGTTTGCTGAGAAAGCAGAAAAGCATAAA 951
Query 775 CTAGAAACCAAGGGAAAAAGAGAAAGTGAGGTAAACAGG-AATACACAGAGCTCCAGCAA 833
|||||||||||| |||||||||| ||||| |||||| | |||||||||| |||||||||
Sbjct 952 CTAGAAACCAAGCGAAAAAGAGAGAGTGAAGTAAAC-GTTAATACACAGATCTCCAGCAA 1010
Query 834 AAGGCACATAGATAAATTTGAGACAGCTCCAGATTCTAAAAGATTGGCAGTTGAGGCTCC 893
|||||||||||||||||| ||| ||| ||| |||||||||||||||||||||| |||||
Sbjct 1011 AAGGCACATAGATAAATTCGAGGCAGTTCCTGATTCTAAAAGATTGGCAGTTGGGGCTCA 1070
Query 894 AACAGGGTCACCCAAGAGATCTGTTCTCCCCAGAGTGTCCGCTTTATCCCGAGAAACATC 953
|| ||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||||||
Sbjct 1071 AATAGGATCACCCAAGAGATCTGTTCTCCCAAGAATGTCCACTTTATCCCGAGAAACATC 1130
Query 954 ATTTAAGGGCTTAGAGAAGCCTGCGAGAAAGCTAGCTCATCACTCATCCTTCAATAGCTA 1013
||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| |
Sbjct 1131 ATTTAAGGGCTTAGAGAAGCCAACGAGAAAGCTAGCTCATTACTCATCTTTCAATAGCCA 1190
Query 1014 CTCCAGTGATGACACAGAAAGCACACGATCTACTGACTCGCAGCTCCGGTCCCCTAAAGG 1073
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1191 CTCCAGTGATGACACAGAAAGCACACGATCTACTGACTCACAGCTCCAGTCCCCTAAAGG 1250
Query 1074 TTCCTTTTACAAGTCCAATTCGTTTAATTCTTCGAGCTCTAGACCAAAAGTGAGACCAGT 1133
||| |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 1251 TTCGTTTTTGAAGTCCAATTCGTTTAATTCTTTGAGCTCTAGATCAAAAGTGAGACCAGT 1310
Query 1134 GGATGATGTTATGCTTCCACGACAGAAGACTGGGAAAGGAAATTCTTCCCTTGATGTAAA 1193
|||||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||||
Sbjct 1311 GGATGATGATATGCTTCCACGACAGAAGACTGGGAATGAAAATTCTTCCCTTGAAGTAAA 1370
Query 1194 GGAAGGATTTTCTAAAAATGTAGGGAAATCAATGTCAAGTAGATGTATAGACGTAGGGAG 1253
|||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1371 GGAAGGATTTTCAAAAAATGTAGGCAAATCAATGTCAAGTAGATGTATTGACGTAGGGAG 1430
Query 1254 CTCTAGTTGTAATGACTCAGAAGTAAAAGGTTCAAAGCAACTGAAAGATCGGAGCACAGT 1313
||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1431 CTCTAATTGTAATGACTCAAAAGTAAAAGGTTCAAAGCAACTGAAAGATTGGAGCACAGA 1490
Query 1314 AGCTAACCCTTCGGTATCCATTTCACGTGGCAATTCATCCATTCCCTATGCAAAAAGTCC 1373
|||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1491 AGCTAACCCTTCAGCATCCATTTCACGTGGCAATTCATCCATTCCTTATGCAAAAAGTCC 1550
Query 1374 CCGTGATTTGAAGGATTTGCAGTCTGATGGTAAACAAG 1411
||||||||||||||||||||||||||||||||||||||
Sbjct 1551 CCGTGATTTGAAGGATTTGCAGTCTGATGGTAAACAAG 1588
> AT5G16680.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:5467373-5473506 REVERSE LENGTH=4395
Length=4395
Score = 492 bits (266), Expect = 9e-138
Identities = 675/863 (78%), Gaps = 65/863 (8%)
Strand=Plus/Plus
Query 1585 GAGGATATT-AATAAGGGCAATAGGTTGCGAGCAGCGGTTGATGCTGCACTGCGTAAAAA 1643
|||||| || |||||||| |||||||| |||||||| || |||||||| |||||||||||
Sbjct 2390 GAGGAT-TTAAATAAGGGTAATAGGTTACGAGCAGCAGTAGATGCTGCTCTGCGTAAAAA 2448
Query 1644 ACCCAGCTTTAGCAAAAACAGAGGGTTGGAGCAATCTGATTTGCCTTCAGT-GT--CTAA 1700
||||||||| |||| ||||||| |||||||||||||| || | ||| | || ||||
Sbjct 2449 GCCCAGCTTTGGCAAGAACAGAGTATTGGAGCAATCTGA--TG-CGTCATTGGTAGCTAA 2505
Query 1701 TGTGGATTCCGGTTGT-AATAAGGCTTTA--AAA--AGTTTACCCTCAAAGGTGCCGGTC 1755
||||||||| ||| | || ||| || || ||| | || || |||||| | | |
Sbjct 2506 TGTGGATTCTAGTTCTGAA-AAGACTCTACGAAATCA-ATTGCCTTCAAAGAT----G-C 2558
Query 1756 ATAAGAGATTGGCCTGTGGGATTCCAAGGATTGCCAGGAGGGCATCCAAATTTACGG--- 1812
|||||| | | | |||| | | ||||||||| |||||||||||| | |||| ||
Sbjct 2559 ATAAGA-A-T--CATGTGTCACACGAAGGATTGCAAGGAGGGCATCCGATTTTATGGCCT 2614
Query 1813 A---C--A---G-ACAAGCAGACAAATGCAGTAAATGAAAACCAGTC-TACACTCGCTGG 1862
| | | | |||||||||||| || | |||||| || ||| | || | || ||||
Sbjct 2615 ACTTCTGATCCGTACAAGCAGACAATTGTAACAAATGAGAAGCAG-CTTATATTCCCTGG 2673
Query 1863 TACTGATGCAATGGCTGCTTCCCAATCT-GTTGAGCTTGAAGTTAATTTTCCTTCTGTAA 1921
| ||||| | || | |||| | || | || || | |||||| | |||||| | ||||
Sbjct 2674 TGCTGATACTAT-AC--CTTCACGAT-TGGTGGAACCTGAAGTCAGTTTTCCCGCCGTAA 2729
Query 1922 AACCAGTCATGAGAGATTTGCCTGTGGCTGCCC-CAAATGTTCTGTCGACAACCTCAGCC 1980
| || |||||||||||||||||| | | | ||| || |||| ||| || || |||||||
Sbjct 2730 AGCCTGTCATGAGAGATTTGCCTTTAG-TTCCCTCACCTGTTATGTTGAGAAGCTCAGCC 2788
Query 1981 ATCCCAGAGCATGAGTATATTTGGCAAGGGGACTTGGAGGTGCAGAAAAGCAGAAATTTA 2040
|| || || ||||||| ||| ||||| |||||||| ||||||| ||||| || ||| |
Sbjct 2789 ATTCCGGACCATGAGTTTATATGGCAGGGGGACTTAGAGGTGCGGAAAATCATAAA-CCA 2847
Query 2041 -TCAGCAATGCATAGTGGAATACAAGCGTATCTT-TCAACCTCAGCATCACCTAAGGTGG 2098
||||| |||||||| ||||| ||||| || || ||||||| ||||||||| | ||| |
Sbjct 2848 GTCAGCTATGCATAGCGGAATTCAAGCACAT-TTATCAACCTTAGCATCACCCAGGGTTG 2906
Query 2099 TTGAAGTGGTGAA-ACAATTTCCTGAAAAAGTCACCTTGAATGAAGTACC-CAGGCTTAG 2156
|||||||||||| | ||||||| |||| ||| |||||||||||||| | || ||
Sbjct 2907 CTGAAGTGGTGAATA-AATTTCCAGAAACTTTCAGTTTGAATGAAGTACCTC-GGAAGAG 2964
Query 2157 TTCATGGCCTGCACAGTTT-CAAGATACAGGTGCTAAGGAA-CAACATGTGGCTCTTTTC 2214
| |||||||| |||| ||| || || |||| |||||||| | ||| | ||||| |||
Sbjct 2965 TACATGGCCTACACAATTTGAAAAAT-TAGGTACTAAGGAAGC-CCATATAGCTCTATTC 3022
Query 2215 TTCTTTGCCAAGGACATC-GAGAGTTATGAGAAAAATTATAAGCCTCTGGTAGATAACAT 2273
|||||||| ||||||| | ||||||||||||| |||||||||||||||||||||||||||
Sbjct 3023 TTCTTTGCAAAGGACA-CTGAGAGTTATGAGAGAAATTATAAGCCTCTGGTAGATAACAT 3081
Query 2274 GATTCA-GAAAGATTTAGCCCT-AAAGGGAAGCCTCGAGGGTGTTGAGCTTTTGATTTTT 2331
||| || ||| ||||||||||| ||||| || | |||| ||||| ||||||||||||
Sbjct 3082 GAT-CAAGAACGATTTAGCCCTGAAAGGAAATC-TCGATAACGTTGACCTTTTGATTTTT 3139
Query 2332 GCGTCCAACCAGCTTCCT-CAGGATTGCCAGCGCTGGAACATGTTATTTTTCCTTTGGGG 2390
|| ||||||||||||||| | | |||||||||||||||||||||||| ||||||||||||
Sbjct 3140 GCATCCAACCAGCTTCCTTC-GAATTGCCAGCGCTGGAACATGTTATATTTCCTTTGGGG 3198
Query 2391 TGTATTCCGAGGaaaaaaaGAGA 2413
||| |||| ||||| ||||||||
Sbjct 3199 TGTCTTCCAAGGAAGAAAAGAGA 3221
Score = 435 bits (235), Expect = 2e-120
Identities = 590/755 (78%), Gaps = 49/755 (6%)
Strand=Plus/Plus
Query 544 AACACATCAGCCATGTCTGAGAGTGAGAGTGAAACTGATCCTGAAA---T-G--CTTGAT 597
||| ||||||| |||||||||| ||||||| | |||| |||||| | | | ||||
Sbjct 1088 AACTCATCAGCTGTGTCTGAGAGCGAGAGTG--A-TGATTCTGAAATGGTCGAACATGAT 1144
Query 598 GTAAAAGTATGTGATACT-TGTGGAGATGCGGGTCGTGAGGATTTACTTGCTATCTGTAG 656
||||| || ||||||| | ||||||||||| |||||||| |||||||| |||||||||||
Sbjct 1145 GTAAAGGTTTGTGATA-TCTGTGGAGATGCTGGTCGTGAAGATTTACTCGCTATCTGTAG 1203
Query 657 CAGATGCAGTGATGGGGCAGAACACACCTATTGCATGCGAGTAATGCTTAAAAAAGTTCC 716
| ||||||||||||||||||||||||||||||||||||| | |||||| | |||||||
Sbjct 1204 CGGATGCAGTGATGGGGCAGAACACACCTATTGCATGCGGGAAATGCTGGATGAAGTTCC 1263
Query 717 TAAGGGTTATTGGCTTTGTGAAGAATGCAAGTTTGCTGAGGAAGCAGAAAAGCAGAAGCT 776
| ||||| ||||||| ||||||||||| | ||||||||||| |||||||||||||
Sbjct 1264 TGAGGGTGATTGGCTATGTGAAGAATG----T--GCTGAGGAAGCTGAAAAGCAGAAGCA 1317
Query 777 AGAAACCAAGGGAAAAAGAGAAAGTGAGGTAAACAGGAATACACAGAGCTCCAGCAAAAG 836
|||| | ||| |||||||||||| |||||||| | ||||| | ||||| |||||||
Sbjct 1318 AGAAGCTAAGAGAAAAAGAGAAACTGAGGTAACCTTCAATACTTATAGCTCTGGCAAAAG 1377
Query 837 GCACATAGATAAATTTGAGACAGCTCCAGATTCTAAAAGATTGGCAGTTGAGGCTCCAAC 896
|||| ||||||| ||||| | ||||||||| |||||||| || ||||||||| ||||
Sbjct 1378 GCACGCAGATAAAATTGAGGCCGCTCCAGATGCTAAAAGACAGGTGGTTGAGGCTTCAAC 1437
Query 897 AGGGTCACCCAAGAGATCTGTTCTCCCCAGAGT-G-TCCGCTTTATCCCGAGAAACATCA 954
|| |||||||||| ||| ||||||||||||| | | || || ||| || |||||||||
Sbjct 1438 TGGCTCACCCAAGAAATCCATTCTCCCCAGAGTAGGTGCG-TT-ATCTCGGGAAACATCA 1495
Query 955 TTTAAGGGCTTAGAGAAGCCTGCGAG-AAAGCTAGCTCATCACTCATCCTTCAATAGCTA 1013
|| ||||||||||| | | | | | ||||||| |||||| |||| | | |
Sbjct 1496 TTCAAGGGCTTAGACAGGT-TAAGGGGAAAGCTAAATCATCAAACATC----A-T---T- 1545
Query 1014 CTCCAGTGATGACACAGAAAGCACACGATCTACTGACTCGCAGCTCCGGTCC-CCTAAAG 1072
| ||||||||||||||||| |||||||| ||| || ||||||| || || ||||
Sbjct 1546 C---AGTGATGACACAGAAAGTGCACGATCTGCTGGTTCACAGCTCCAA-CCTCCAAAAG 1601
Query 1073 GTTCCTTTTACAAGTCCAATTCGTTTAATTCTTCGAGCTCTAGACCAAAAGTG-AGACC- 1130
|| | |||| || |||| ||| ||||||| ||||||||| | ||| |||||| | ||
Sbjct 1602 GTGCATTTTTGAAATCCAGTTCCTTTAATTGTTCGAGCTCGAAACCGAAAGTGCA-ACTT 1660
Query 1131 AGTGGATGATGTTATGCTTCCACGACAGAAGACTGGGAAAGGAA-ATTCTTCCCTTGATG 1189
| ||||||||| ||| | ||| ||||||||||||| |||| || || || | ||||||
Sbjct 1661 A-TGGATGATGCTATTCACCCAAGACAGAAGACTGGCAAAG-AAGATACTGCACTTGATT 1718
Query 1190 TAAA-G-GAAGGATTTTCTAAAAATGTAGGGAAATCAATGTCAAGTAGATGTATAGACGT 1247
|||| | | || |||| | ||||||||| || |||||| |||||||| || ||| |
Sbjct 1719 TAAAAGTGGGGGGTTTT--AGAAATGTAGGCAAGTCAATGCCAAGTAGAACTACAGATGC 1776
Query 1248 AGGGAGCTCTAGTTGTAAT-GACTCAGAAGTAAAA 1281
||||| ||| || | || |||||| ||| ||||
Sbjct 1777 AGGGAATTCTGGTGG-AAGCGACTCACAAGCAAAA 1810
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 144631296669
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5