BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477542 Length=741 Score E Sequences producing significant alignments: (Bits) Value AT3G02960.1 | Symbols: | Heavy metal transport/detoxification ... 1164 0.0 AT5G63530.1 | Symbols: ATFP3, FP3 | farnesylated protein 3 | ch... 63.9 2e-09 > AT3G02960.1 | Symbols: | Heavy metal transport/detoxification superfamily protein | chr3:667245-668626 REVERSE LENGTH=741 Length=741 Score = 1164 bits (630), Expect = 0.0 Identities = 707/744 (95%), Gaps = 6/744 (1%) Strand=Plus/Plus Query 1 ATGGGAAAGAACAAGCAAAATGGAGAATCAGATAACAAGTCAGAAAAGAAGAACCAGAAA 60 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 1 ATGGGAAAGAACAAGCAAAATGGAGAATCAGACAACAAGTCTGAAAAGAAGAACCAGAAA 60 Query 61 AATGGAGATTCATCAGTCGATAAGTCTGATAAGAAAAATCAATGTAAACAAATTGTTCTG 120 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 61 AATGGAGATTCATCAGTCGATAAGTCTGATAAGAAAAATCAATGTAAAGAAATTGTTCTG 120 Query 121 AAGGTTTACATGCACTGTGAAGGATGTGCATCACAAGTTTCTCATTGCTTGAGGGGCTAC 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AAGGTTTACATGCACTGTGAAGGATGTGCATCACAAGTTTCTCATTGCTTGAGGGGCTAT 180 Query 181 GATGGGGTTGAGCAAATTAAGACAGAGATCGGAGACAATAAAGTGGTTGTGTCTGGAAAA 240 |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 181 GATGGGGTTGAGCATATTAAGACAGAGATAGGAGACAATAAAGTTGTTGTGTCTGGAAAA 240 Query 241 TTTGATGATCCGTTGAAGATATTACGAAGAGTGCAAAAGAAATTTAGTAAAAATGCTGAG 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 241 TTTGATGATCCGTTGAAGATATTACGAAGAGTGCAAAAGAAATTTAGTAGAAATGCTGAG 300 Query 301 TTGATTTCCCCAAAACCTAACCCCAAACAAGATCATCAGAAGGAGCCACAACAAAAGAAA 360 ||||||||||||||| |||||| ||||||||||| |||||||||||| ||||||||| Sbjct 301 ATGATTTCCCCAAAACATAACCCTAAACAAGATCA---GAAGGAGCCACAGCAAAAGAAA 357 Query 361 GAAAGTGCTCCCCAGATCAAAACTGCAATTTTAAAAATGAACATGCACTGTGAAGGATGT 420 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 358 GAAAGTGCTCCCGAGATCAAAACTGCAATTTTAAGAATGAACATGCACTGTGAAGGATGT 417 Query 421 GTTCATGAAATCAAAAGAGGCATTGAGAAAATAAAAGGTATTCAATCGGTGGAACCAGAC 480 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 418 GTTCATGAAATCAAAAGAGGCATTGAAAAAATAAAAGGCATTCAATCGGTGGAACCAGAC 477 Query 481 CGGTCAAAGTCAACAGTAGTGGTACGAGGAGTCATGGATCCTCCAAAACTTGTGGAGAAA 540 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 478 CGGTCAAAGTCAACGGTAGTGGTACGAGGAGTCATGGATCCTCCAAAACTTGTGGAGAAA 537 Query 541 ATCAAGAAAAAGCTTGGGAAACACGCAGAGCTTCTAAGTCAAACCAGAGAGAAAGGCAAA 600 ||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||||||| Sbjct 538 ATCAAGAAAAAACTTGGGAAACATGCAGAGCTTCTAAGTCAAATTACAGAGAAAGGCAAA 597 Query 601 GACAATAATAATAATAA---TCATAAGAATGAAGACAGTGATGGAAACAAAATCTTTAGT 657 ||||||||||| || || | ||||||| ||||| |||||||||||||||||||||||| Sbjct 598 GACAATAATAAGAAGAACAATAATAAGAAGGAAGAAAGTGATGGAAACAAAATCTTTAGT 657 Query 658 TACCCTCCTCAGTATTCATCCCAACATGCTTATCCCTCTCAGATCTTTAGCGACGAAAAT 717 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 658 TACCCTCCTCAGTATTCATCTCAACATGCTTATCCCTCTCAGATTTTTAGCGACGAAAAT 717 Query 718 GTACATTCCTGTTCGATCATGTGA 741 |||||||| ||||| ||||||||| Sbjct 718 GTACATTCTTGTTCAATCATGTGA 741 > AT5G63530.1 | Symbols: ATFP3, FP3 | farnesylated protein 3 | chr5:25433154-25435834 FORWARD LENGTH=1413 Length=1413 Score = 63.9 bits (34), Expect = 2e-09 Identities = 36/37 (97%), Gaps = 0/37 (0%) Strand=Plus/Plus Query 113 TTGTTCTGAAGGTTTACATGCACTGTGAAGGATGTGC 149 ||||||| ||||||||||||||||||||||||||||| Sbjct 349 TTGTTCTTAAGGTTTACATGCACTGTGAAGGATGTGC 385 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35967649252 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5