BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477543 Length=1110 Score E Sequences producing significant alignments: (Bits) Value AT3G02970.1 | Symbols: EXL6 | EXORDIUM like 6 | chr3:669103-670... 1655 0.0 > AT3G02970.1 | Symbols: EXL6 | EXORDIUM like 6 | chr3:669103-670541 REVERSE LENGTH=1159 Length=1159 Score = 1655 bits (896), Expect = 0.0 Identities = 1056/1130 (93%), Gaps = 24/1130 (2%) Strand=Plus/Plus Query 1 ATCAAAGGCCAAAAGAACAGAAAAAAG-TTTCTTCACGC---GG---TGGCAATGGCG-- 51 ||||||||||||||||||||||||||| ||| ||||||| || ||||||||||| Sbjct 1 ATCAAAGGCCAAAAGAACAGAAAAAAGTTTTTTTCACGCGGTGGCAATGGCAATGGCGTC 60 Query 52 T-CTTCTTCCTCCTCCTCCT---TATCCGTCACCATTTTCCTCCTCTTGGCGCCTCTCTG 107 | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 61 TGCTTCTTCCTCCTCCTCCTCCATATCCGTCATCATTTTCCTCCTCTTGGCGCCTCTCTG 120 Query 108 CCTTTCACGTGAGTCACCTTCGCAAATCCCAAACGGAACCCTAGATCTCTCTTTACTATG 167 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 121 CCTTTCACGTGAGCCACCTTCACAAATCCCAAACGGAACCCTAGATCTCTCTTTACTATG 180 Query 168 GTACGGCCAATTCACGCCTATTCAAAAGGAGAGGGTTCAAGATTTCATAGAATCGCTTAA 227 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 181 GTACGGCCAATTCACGCCTACTCAAAAGGAGAGGGTTCACGATTTCATAGAATCGCTTAA 240 Query 228 CTTCGACGCCAAGGAAGGTCTTGACCCAAAGGTATCGGCCTGGTGGAAAGTGGTGGAGAG 287 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 241 CTTCGACGCCAAGGAAGGTCTTGACCCGAAGGTATCGGCGTGGTGGAAAGTGGTGGAGAG 300 Query 288 TTACCAAGAGAGGTTCGAGGTGAAGGATATTTACCGACAGAAGAAGAGTAACAGAACCGT 347 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TTACCAAGAGAGGTTTGAGGTGAAGGATATTTACCGACAGAAGAAGAGTAACAGAACCGT 360 Query 348 AGCTCCGAGGATTAAGGTCAAGGTTGTCCGGAGTTATGTGGATGAGAAGATGAAGTATGG 407 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 361 AGCTCCGAGGATTAAGGTGAAGGTTGTCCGGAGTTATGTGGATGAGAAGATGAAGTATGG 420 Query 408 AAAGGAATTGACAATCGGAAATGCTGAGAAACTTGTTGAGACGGCCATCGGAAATATGTC 467 ||||||||||||||| || || | ||||||||||||||||||||| |||||||||||||| Sbjct 421 AAAGGAATTGACAATGGGGAACGGTGAGAAACTTGTTGAGACGGCTATCGGAAATATGTC 480 Query 468 GAAAGTGGTGCCCGTTGTATTACTTTCGGCGCAAGTTAGGGCT-ATTGGCGTAGGGTTTT 526 ||||||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||| Sbjct 481 GAAAGTGGTTCCCGTGGTATTACTTTCGGCGCAAGTTAGGGCTCA-TGGCGTAGGGTTTT 539 Query 527 GTAACGGAACTTGCCAACATAACGCCCTTGCCAAAATTAAAGGTCAAAATGAACCGCGAC 586 || ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct 540 GTGACGGAACTTGCCAACATAACGCCCTAGCCAAAATTAAAGGTCAAAAAGAACCACGAC 599 Query 587 CGTACATAATGGTAAGCAACCCGGAGGAT-GAATGTCCCGGAGAGTGCGCTTGGCCTTTC 645 |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 600 GGTACATAATGGTAAGCAACCCGGAGG-TGGAATGTCCCGGAGAGTGCGCTTGGCCTTTC 658 Query 646 CACACGGCCGACAAGGGTCCACGTGGCATGACCTATCAACCGCCAAGTGGCGAAGTTGGA 705 ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| ||| Sbjct 659 CACACGGCCGATAAGGGTCCACGTGGCATGACCTATCAACCGGCAAGTGGAGAAGTCGGA 718 Query 706 GCCGACGCATTGGTTATTCAGCTAGCCACCGGTTTAGCCGATCTCGCCACCAATCCA-AC 764 || |||||| |||||||||||||||||||||||||||||||| | |||||||||||| | Sbjct 719 GCTGACGCACTGGTTATTCAGCTAGCCACCGGTTTAGCCGATTTGGCCACCAATCCAGA- 777 Query 765 TCTAACCGAGTTCTTATTCAAATCTGAGACGACACCGTACAACGATGACGGAAAGAGAAA 824 ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 778 TCTAACCAAGTCCTTATTCAAATCTGAGACGACACCGTACAACGATGACGTAAAGAAAAA 837 Query 825 CCATG--T-TTCTTCCATCTATATCGCGGACCCTGCAACCAAATGCACTCGGGTTTTTGG 881 ||||| | ||| || || ||||| | ||||||||||||||| ||||||||||||||||| Sbjct 838 CCATGAATCTTCGTCAATGTATATTGTGGACCCTGCAACCAAGTGCACTCGGGTTTTTGG 897 Query 882 ATCCGGAGCTTTCCCAGGTTTCACCGGTAGAATTCGGGTTGACCCGGTAACTGGTGGAGC 941 |||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct 898 ATCCGGAGCTTTTCCAGGTTTCACTGGTAGAATTCGGGTTGACCCGATTACTGGTGGAGC 957 Query 942 CTTTAATTCACACGGAATCAACCACTTGAAATTCTTGATTCCTTCTATTTGGGACCCTAA 1001 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 CTTTAATTCACACGGAATCAACCACTTGAAATTCTTGATTCCTTCTATTTGGGACCCTAA 1017 Query 1002 GACCAAATCTTGCTGGACTCCTATGTAAACCGTTACTATTAC-ATATTGTTACACAGTTT 1060 ||||||||||||||||||||||||||||||||||| |||||| | || |||||||||||| Sbjct 1018 GACCAAATCTTGCTGGACTCCTATGTAAACCGTTATTATTACGACAT-GTTACACAGTTT 1076 Query 1061 TTACCCTTTATGAACTTTTAAGGTTATCTTGTTATTGGAAGTATTCAATA 1110 |||||||| |||||||||||||||| | |||||||||||| ||||||||| Sbjct 1077 TTACCCTTCATGAACTTTTAAGGTTGTTTTGTTATTGGAAATATTCAATA 1126 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54417390780 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5