BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477555
Length=2031
Score E
Sequences producing significant alignments: (Bits) Value
AT3G03090.1 | Symbols: AtVGT1, VGT1 | vacuolar glucose transpor... 2532 0.0
AT5G17010.1 | Symbols: | Major facilitator superfamily protein... 1327 0.0
> AT3G03090.1 | Symbols: AtVGT1, VGT1 | vacuolar glucose transporter
1 | chr3:700456-704769 REVERSE LENGTH=1995
Length=1995
Score = 2532 bits (1371), Expect = 0.0
Identities = 1582/1684 (94%), Gaps = 14/1684 (1%)
Strand=Plus/Plus
Query 1 TTGTCGTCTCCCGTCCTCACGTTTCTCTCGTCTGCGAATTCGAAGCT-CGTAGAGCTCGA 59
|||||||||||| |||||||||||||||| ||||| ||||||||||| ||| ||||||||
Sbjct 22 TTGTCGTCTCCCTTCCTCACGTTTCTCTCCTCTGCAAATTCGAAGCTCCGTTGAGCTCGA 81
Query 60 ATCAGACAAGTTGCTAATTCGTACAAGCCCAGAA--AGAGATCTTTTTCTGGGCCTCCTT 117
|||||| |||| |||| ||||||||| ||||||| | | || |||||||||| |||||
Sbjct 82 ATCAGAGAAGTAGCTATTTCGTACAACCCCAGAACGATATATTTTTTTCTGGGTTTCCTT 141
Query 118 GAACAAACCACACTCACGTGTGTCGGGATCCATATCAAGCTTCCTTAGCCATGGGGTTTG 177
||||| |||||||||||| || ||||||||||| ||||||||| |||||||||||||||
Sbjct 142 GAACATACCACACTCACG-GTCACGGGATCCATACCAAGCTTCCGTAGCCATGGGGTTTG 200
Query 178 ATCCCGAGAACCAATCGATTTCTTCCGTTGGACA-G--GTTGGTGATTCTTCTTCAGGTG 234
||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||
Sbjct 201 ATCCCGAGAACCAATCGATCTCTTCCGTTGGACAGGTTGTTGGTGATTCTTCTTCAGGTG 260
Query 235 AGATCAATGCTCAAAAGGAACCTTTGATAAAAGAGAATCACAGCCCAGAAAACTACTCTG 294
||| | |||| |||||||||||||| |||| || || ||||||||||| ||||||||||
Sbjct 261 GGATTACTGCTGAAAAGGAACCTTTGTTAAAGGAAAACCACAGCCCAGAGAACTACTCTG 320
Query 295 TTCTTGCAGCCATTCCCCCGTTTCTTTTTCCAGCTCTTGGAGCGTTGCTTTTTGGTTATG 354
|||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 321 TTCTTGCAGCCATTCCTCCGTTTCTCTTTCCAGCTCTTGGAGCATTGCTTTTTGGTTATG 380
Query 355 AAATTGGTGCGACATCTTGTGCTATCATGTCTATTAAGTCGCCTACTCTAAGTGGAATTA 414
|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 381 AAATTGGTGCAACATCTTGTGCTATCATGTCTCTTAAGTCGCCTACTCTAAGTGGAATTT 440
Query 415 CATGGTACGACTTGTCTTCAGTCGATGTTGGTATACTTACCAGTGGCTCACTGTATGGTG 474
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 441 CATGGTACGACTTGTCTTCAGTGGATGTTGGTATAATTACCAGTGGCTCACTGTATGGTG 500
Query 475 CCTTAATTGGCTCCATTGTTGCATTTAGTGTTGCCGACATTATAGGAAGGAGAAAGGAGC 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 501 CCTTAATTGGCTCCATTGTTGCATTTAGTGTTGCCGACATTATAGGAAGGAGAAAGGAGC 560
Query 535 TGATTTTGGCTGCATTCTTGTATCTTGTCGGAGCCATTGTGACTGTAGTAGCACCTGTCT 594
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 561 TGATTTTGGCTGCATTCTTGTATCTTGTTGGAGCCATTGTGACTGTAGTAGCACCTGTCT 620
Query 595 TTTCCATACTGATAATTGGACGAGTTACTTATGGCATGGGGATTGGACTGACAATGCACG 654
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 621 TTTCCATACTGATAATTGGACGAGTTACGTATGGCATGGGGATTGGACTGACCATGCACG 680
Query 655 CGGCTCCAATGTACATTGCGGAGACTGCTCCTAGTCAAATACGTGGACGGATGATATCAC 714
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 681 CGGCTCCAATGTACATTGCAGAGACTGCTCCAAGTCAAATACGTGGACGGATGATATCAC 740
Query 715 TGAAAGGAATTTTCCACTGTTCTTGGGATGGTTG----TTATGGAATCGGTAGCCTTTGG 770
| ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 741 T-AAAGGAATTCTCCACTGTCCTTGGGATGGTTGGGGGTTATGGAATCGGTAGCCTTTGG 799
Query 771 GTTACGGTTTTTTCTGGCTGGCGTTGTATGTACGCAACAATTCTCCCTTTGCCAGTTATT 830
|||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||||||
Sbjct 800 ATTACGGTTATTTCTGGTTGGCGTTACATGTACGCAACAATTCTCCCTTTTCCAGTTATT 859
Query 831 ATGGGAATTGGAATGTGTTGGCTACCAGCATCTCCGAGGTGGCTTTTATTGCGCGCTCTC 890
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 860 ATGGGAACTGGAATGTGTTGGCTACCAGCATCTCCGAGGTGGCTTTTACTGCGCGCTCTC 919
Query 891 CAGAGAAAAGGGAATGTGGAGAATCTTCAACAGGCTGCAATTAGGTCTCTTCGTCGCCTT 950
||| || |||| |||| ||||||||||||||||||||| ||||| |||||| ||||||||
Sbjct 920 CAGGGACAAGGAAATGGGGAGAATCTTCAACAGGCTGCGATTAGATCTCTTTGTCGCCTT 979
Query 951 AGAGGGTCTGCCATAGCTGACTCAGCAGCTGAACAAGTAAACGAGATCTTGGCTGAACTT 1010
|||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 980 AGAGGGTCTGTCATAGCTGACTCAGCAGCTGAACAAGTAAACGAAATATTGGCTGAACTT 1039
Query 1011 TCCTTTGTAGGTGAGGACAAAGAAGCTACATTTGGTGAATTATTTCGAGGCAAATGCTTA 1070
||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1040 TCCCTTGTGGGTGAAGACAAAGAAGCTACATTTGGTGAATTATTTCGAGGCAAATGCTTG 1099
Query 1071 AAAGCTCTCAAAATTGCAGGAGGGTTAGTCTTGTTCCAACAGATAACTGGGCAACCAAGT 1130
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100 AAAGCTCTCACTATAGCAGGAGGGTTAGTCTTGTTCCAACAGATAACTGGGCAACCAAGT 1159
Query 1131 GTACTTTATTATGCACCATCAATACTACAGACTGCCGGCTTTTCTGCTGCAGCTGATGCA 1190
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1160 GTACTATATTATGCACCATCAATACTACAGACTGCCGGCTTTTCTGCTGCAGCTGATGCA 1219
Query 1191 ACTCGGATCTCAATTCTGCTCGGTCTATTGAAGTTGGTTATGACAGGAGTTTCTGTTATA 1250
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1220 ACTCGGATCTCAATTCTGCTCGGCCTATTGAAGTTGGTTATGACAGGAGTTTCTGTGATA 1279
Query 1251 GTTATTGACAGAGTTGGAAGGAGACCTTTACTTCTTGGCGGTGTTAGTGGCATGGTGATC 1310
||||| |||||||||||||||||||||||||||||| | |||||||| || |||||||||
Sbjct 1280 GTTATCGACAGAGTTGGAAGGAGACCTTTACTTCTTTGTGGTGTTAGCGGAATGGTGATC 1339
Query 1311 TCATTGTTCCTCCTGGGGTCCTACTACATCTTTTATAAAAGTGTACCAGCTGTTGCTGTA 1370
||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1340 TCATTGTTCCTCCTGGGATCCTACTACATGTTTTATAAAAATGTACCAGCTGTTGCTGTA 1399
Query 1371 GCTGCATTGCTACTGTATGTAGGCTGTTACCAGCTATCCTTTGGCCCTATTGGTTGGCTG 1430
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1400 GCTGCATTGCTACTGTATGTAGGCTGTTACCAGCTGTCCTTTGGCCCTATTGGTTGGCTG 1459
Query 1431 ATGATTTCAGAGATATTTCCCTTAAAATTAAGAGGTCGAGGAATCAGTCTAGCAGTTCTT 1490
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 1460 ATGATTTCAGAGATATTTCCCTTAAAATTAAGAGGTAGAGGAATCAGTCTAGCAGTGCTT 1519
Query 1491 GTGAATTTCGGAGCAAACGCACTAGTGACATTCGCTTTCTCACCTCTAAAGGAGCTGTTA 1550
|||||||| || ||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 1520 GTGAATTTTGGCGCAAACGCACTTGTGACATTCGCTTTCTCACCGCTAAAGGAGCTGTTA 1579
Query 1551 GGAGCTGGAAT-CTTGTTCTGTGCATTTGGAGTGATATGTGTAGTGTCTCTCTTCTTCAT 1609
||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1580 GGAGCTGGAATACT-GTTCTGTGCATTTGGAGTGATATGTGTCGTGTCTCTCTTCTTCAT 1638
Query 1610 ATACTACATAGTGCCAGAGACAAAGGGTCTCACTCTTGAAGAAATTGAAGCCAAATGTCT 1669
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1639 ATACTACATTGTGCCAGAGACAAAGGGTCTCACTCTTGAAGAAATTGAAGCCAAATGTCT 1698
Query 1670 CTAA 1673
||||
Sbjct 1699 CTAA 1702
Score = 359 bits (194), Expect = 7e-98
Identities = 211/219 (96%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 1674 GAGCTGTTAGGAGCTGGAAT-CTTGTTCTGTGCATTTGGAGTGATATGTGTAGTGTCTCT 1732
|||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||
Sbjct 1571 GAGCTGTTAGGAGCTGGAATAC-TGTTCTGTGCATTTGGAGTGATATGTGTCGTGTCTCT 1629
Query 1733 CTTCTTCATATACTACATTGTGCCAGAGACAAAGGGTCTCACTCTTGAAGAAATTGAAGC 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1630 CTTCTTCATATACTACATTGTGCCAGAGACAAAGGGTCTCACTCTTGAAGAAATTGAAGC 1689
Query 1793 CAAATGTCTCTAAAAGGTTTCTCATCTTAGCTCCACTTTCTCTGCTGCTTCATTGCTTGA 1852
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1690 CAAATGTCTCTAAAAGGTTACTCATCTTAGCTCCACTTTCTGTGCTGCTTCATTGCTTGA 1749
Query 1853 GGATCTGAATCGCAAACGCACCAGCCGCAGGTGGAGTCA 1891
|||||| |||||||||||||||||||||| ||| |||||
Sbjct 1750 GGATCTAAATCGCAAACGCACCAGCCGCATGTGTAGTCA 1788
Score = 141 bits (76), Expect = 3e-32
Identities = 132/156 (85%), Gaps = 16/156 (10%)
Strand=Plus/Plus
Query 1892 ACTGTTTGGATAACTTTAAAAGAATGGTTGCATCTCGCTGCAAAATTTGGTGCGTT-G-- 1948
|||||||||||| |||| |||||||||||| |||| || ||||||||||||||||| |
Sbjct 1817 ACTGTTTGGATATCTTTTAAAGAATGGTTGTATCTAGCGGCAAAATTTGGTGCGTTGGAA 1876
Query 1949 --G-------A--C--AAGTTTGCTTAATTTGTATGTTAAAATACGCGTTCAAAATTTTG 1995
| | | ||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct 1877 AAGTTTTAAAATTCGAAAGTTTGCTTAATTTGTATTTTAAAACACGCATTCAAAATTTTG 1936
Query 1996 TGATTGTATGAAAATAATGTGAGATTCAAAATTTTA 2031
||||||||||||||||||||||||||||||||||||
Sbjct 1937 TGATTGTATGAAAATAATGTGAGATTCAAAATTTTA 1972
> AT5G17010.1 | Symbols: | Major facilitator superfamily protein
| chr5:5587351-5592446 REVERSE LENGTH=2040
Length=2040
Score = 1327 bits (718), Expect = 0.0
Identities = 1227/1469 (84%), Gaps = 49/1469 (3%)
Strand=Plus/Plus
Query 231 GGTGAGATCAATGCTCA-AAA-GGAACCT-TTGATAAAAGAGAATCACAG-CCCAGAAAA 286
||||||||| | || || ||| ||| ||| || || ||||||||||| | |||||||||
Sbjct 181 GGTGAGATC-A-GCCCAGAAAGGGAGCCTCTT-ATTAAAGAGAATCA-TGTCCCAGAAAA 236
Query 287 CTACTCTGTTC-TTGCAGCCATTCCCCCGTTTCTT-TTTCCAGCTCTTGGAGCG-TTGCT 343
|||||||| || |||| ||||||| ||||||| || ||||||||||| |||| | ||||
Sbjct 237 CTACTCTG-TCGTTGCCGCCATTCTCCCGTTT-TTATTTCCAGCTCTCGGAG-GACTGCT 293
Query 344 TTTTGGTTATGAAATTGGTGCGACATCTTGTGCTATCATGTCTA-TTAAGTCGCCTAC-T 401
|| |||||||||||||||||| || |||||||| | ||| || | || |||||||| | |
Sbjct 294 TTATGGTTATGAAATTGGTGCAACTTCTTGTGCAACCATTTC-ACTTCAGTCGCCTTCAT 352
Query 402 CTAAGTGGAATTACATGGTACGACTTGTCTTCAGTCGATGTTGGTATACTTACCAGTGGC 461
||||||||||| |||||||| ||||||| ||||| ||||||||| || |||||||||||
Sbjct 353 -TAAGTGGAATTTCATGGTACAACTTGTCCTCAGTGGATGTTGGTCTAGTTACCAGTGGC 411
Query 462 TCACTGTATGGTGCCTTAATTGGCTCCATTGTTGCATTTAGTGTTGCCGACATTATAGGA 521
||||| || ||||| ||| ||||||| ||||| || |||| | | || ||| ||||||||
Sbjct 412 TCACTTTACGGTGCATTATTTGGCTCAATTGTGGCTTTTACTATCGCTGACGTTATAGGA 471
Query 522 AGGAGAAAGGAGCTGATTTTGGCTGCATTCTTGTATCTTGTCGGAGCCATTGTGACTGTA 581
|| |||||||||||||||||||||||||| |||||||| || |||||| ||||||||| |
Sbjct 472 AGAAGAAAGGAGCTGATTTTGGCTGCATTATTGTATCTCGTTGGAGCCCTTGTGACTGCA 531
Query 582 GTAGCACCTGTCTTTTCCATACTGATAATTGGACGAGTTACTTATGGCATGGGGA-TTGG 640
|||| || || |||| | |||||||||||||| |||| |||||| | | ||||
Sbjct 532 CTAGCCCCAACCTATTCCGTTCTGATAATTGGACGGGTTATTTATGGGGT-CTCAGTTGG 590
Query 641 ACTGACAATGCACGCGGCTCCAATGTACATTGCGGAGACTGCTCCTAGTCAAATACGTGG 700
|||| ||||||| |||||||| ||||||||||| ||||||||||| |||| ||||||||
Sbjct 591 ACTGGCAATGCATGCGGCTCCGATGTACATTGCAGAGACTGCTCCAAGTCCGATACGTGG 650
Query 701 ACGGATGATATCACTGAAAGGAATT-TTCCACT-GTTCTTGGGATGGTT----GTTATGG 754
|| | || ||||| | ||||||||| || || | || |||||||||||| |||||||
Sbjct 651 ACAGCTGGTATCA-TTAAAGGAATTCTT-CA-TAGTCCTTGGGATGGTTGGAGGTTATGG 707
Query 755 AATCGGTAGCCTTTGGGTTACGGTTTTTTCTGGCTGGCGTTGTATGTACGCAACAATTCT 814
||||||||| ||| || | ||| |||||| ||||| | ||||| ||||||| | |
Sbjct 708 AATCGGTAGTCTTACAGTCAATGTTCATTCTGGTTGGCGATACATGTATGCAACAAGTGT 767
Query 815 CCCTTTGCCAGTTATTATGGGAATTGGAATGTGTTGGCTACCAGCATCTCCGAGGTGGCT 874
||||||| ||||||||||||||||||| ||||| ||||| |||||||| || ||||||||
Sbjct 768 CCCTTTGGCAGTTATTATGGGAATTGGGATGTGGTGGCTCCCAGCATCCCCTAGGTGGCT 827
Query 875 TTTATTGCGCGCTC-TCCAGAGAAAAGGGAATGTGGAGAATCTTCAACAGGCTGCAATTA 933
||| ||||||| || | ||| | ||||||||||||||||| | | | |||||||||| |
Sbjct 828 TTTGTTGCGCG-TCATACAGGGGAAAGGGAATGTGGAGAACCAACGAGAGGCTGCAATCA 886
Query 934 GGTCTCTTCGT-C-GCCTTAGAGGGTCTGCCATAGCTGACTCAGCAGCTGAACAAGTAAA 991
|||| || | | |||||||||| |||| | | ||| ||||| ||||||||||||||
Sbjct 887 AATCTC-TC-TGCTGCCTTAGAGGCCCTGCTTTTGTTGATTCAGCTGCTGAACAAGTAAA 944
Query 992 CGAGATCTTGGCTGAACTTTCCTTTGTAGGTGAGGACAAAGAAGCT-ACATTTGGTGAAT 1050
||||| ||||||||||| | ||||| || ||||| ||||||| | |||||||||||||
Sbjct 945 TGAGATTTTGGCTGAACTAACTTTTGTGGGCGAGGATAAAGAAG-TCACATTTGGTGAAT 1003
Query 1051 TATTTCGAGGCAAATGCTTAAAAGCTCTCAAAATTGCAGGAGGGT-TAGTCTTGTTCCAA 1109
|||||| ||| || ||||| |||||||||| || | |||| ||| |||||||||| ||
Sbjct 1004 TATTTCAAGGGAAGTGCTTGAAAGCTCTCATCATAGGAGGA-GGTCTAGTCTTGTTTCAG 1062
Query 1110 CAGATAACTGGGCAACCAAGTGTACTTTATTATGCACCATCAATACTACAGACTGCCGGC 1169
||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||
Sbjct 1063 CAGATAACTGGACAACCAAGTGTGCTTTATTATGCACCATCAATACTGCAGACCGCTGGC 1122
Query 1170 TTTTCTGCTGCAGCTGATGCAACTCGGATCTCAATTCTGCTCGGTCTATTGAAGTTGGTT 1229
||||| || |||| ||||||||| || |||||||||| || ||||||||||||||| ||
Sbjct 1123 TTTTCAGCCGCAGGTGATGCAACAAGGGTCTCAATTCTACTTGGTCTATTGAAGTTGATT 1182
Query 1230 ATGACAGGAGTTTCTGTTATAGTTATTGACAGAGTTGGAAGGAGACCTTTACTTCTTGGC 1289
||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||
Sbjct 1183 ATGACAGGAGTAGCTGTTGTAGTTATCGACAGACTTGGAAGGAGACCTTTACTTCTTGGT 1242
Query 1290 GGTGTTAGTGGCATGG-TGATCTCATTGTTCCTCCTGGGGTCCTACTACATCTTTTATAA 1348
|| ||| ||||||||| || | ||||| ||||| |||||||| |||||| |||||| | |
Sbjct 1243 GGAGTTGGTGGCATGGTTG-TTTCATTATTCCTGCTGGGGTCATACTACCTCTTTT-TCA 1300
Query 1349 AAGTGT-ACCAGCTGTTGCTGTAGCTGCATTGCTACTGTATGTAGGCTGTTACCAGCTAT 1407
| | ||||| ||||||||||| |||| |||| || ||||| ||||||||||||||||
Sbjct 1301 GCGCCTCACCAGTTGTTGCTGTAGTTGCACTGCTGCTTTATGTGGGCTGTTACCAGCTAT 1360
Query 1408 CCTTTGGCCCTATTGGTTGGCTGATGATTTCAGAGATATTTCCC-TTAAAATTAAGAGGT 1466
| ||||| || ||||||||||||||||||||||||||||||||| ||||| | |||||||
Sbjct 1361 CTTTTGGTCCAATTGGTTGGCTGATGATTTCAGAGATATTTCCCCTTAAACT-AAGAGGT 1419
Query 1467 CGAGGAATCAGTCTAGCAGTTCTTGTGAATTTCGGAGCAAACGCACTAGTGACATTCGC- 1525
||||| ||||||||||||| ||||||||||| || ||||||||||| |||||||| ||
Sbjct 1420 CGAGGTCTCAGTCTAGCAGTGCTTGTGAATTTTGGTGCAAACGCACTTGTGACATTTGCG 1479
Query 1526 TTTCTCACCTCTAAAGGAGCTGTTAGGAGCTGGAAT-CTTGTTCTGTGCATTTGGAGTGA 1584
||| ||||| |||||||| ||| | |||||||| || || ||| |||| ||||| ||||
Sbjct 1480 TTT-TCACCCCTAAAGGAACTGCTGGGAGCTGGGATACT-GTTTTGTGGGTTTGGTGTGA 1537
Query 1585 TATGTGTAGTGTCTCTCTTCTTCATATACTACATAGTGCCAGAGACAAAGGGTCTCACTC 1644
|||||||| ||||||| | ||||||| || ||| |||||||||||||||||||||||||
Sbjct 1538 TATGTGTATTGTCTCTGGTATTCATATTCTTCATTGTGCCAGAGACAAAGGGTCTCACTC 1597
Query 1645 TTGAAGAAATTGAAGCCAAATGTCTCTAA 1673
|||| ||||||||||||||||||||||||
Sbjct 1598 TTGAGGAAATTGAAGCCAAATGTCTCTAA 1626
Score = 154 bits (83), Expect = 3e-36
Identities = 112/126 (89%), Gaps = 2/126 (2%)
Strand=Plus/Plus
Query 1683 GGAGCTGGAAT-CTTGTTCTGTGCATTTGGAGTGATATGTGTAGTGTCTCTCTTCTTCAT 1741
|||||||| || | |||| |||| ||||| |||||||||||| ||||||| | |||||
Sbjct 1504 GGAGCTGGGATAC-TGTTTTGTGGGTTTGGTGTGATATGTGTATTGTCTCTGGTATTCAT 1562
Query 1742 ATACTACATTGTGCCAGAGACAAAGGGTCTCACTCTTGAAGAAATTGAAGCCAAATGTCT 1801
|| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1563 ATTCTTCATTGTGCCAGAGACAAAGGGTCTCACTCTTGAGGAAATTGAAGCCAAATGTCT 1622
Query 1802 CTAAAA 1807
||||||
Sbjct 1623 CTAAAA 1628
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100652092725
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5