BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477565
Length=759
Score E
Sequences producing significant alignments: (Bits) Value
AT3G03190.1 | Symbols: ATGSTF11, ATGSTF6, GSTF11 | glutathione ... 1048 0.0
AT5G17220.1 | Symbols: ATGSTF12, GST26, TT19, GSTF12 | glutathi... 348 5e-95
> AT3G03190.1 | Symbols: ATGSTF11, ATGSTF6, GSTF11 | glutathione
S-transferase F11 | chr3:735028-735987 FORWARD LENGTH=798
Length=798
Score = 1048 bits (567), Expect = 0.0
Identities = 677/726 (93%), Gaps = 24/726 (3%)
Strand=Plus/Plus
Query 1 ACAATTTCATATCAATAGTTACG------C--ATAA--A-ATAATGGTGGTCAAAGTATA 49
||||||||||||||||||||||| | |||| | | ||||||||||||||||||
Sbjct 1 ACAATTTCATATCAATAGTTACGTATAAACATATAATCAGAAAATGGTGGTCAAAGTATA 60
Query 50 TGGGCAGATAAAAGCAGCTAATCCACAAAGAGTATTGCTCTGTTTTTTGGAAAAAGACAT 109
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 61 TGGGCAGATAAAAGCAGCTAATCCACAAAGAGTATTGCTCTGCTTTTTGGAAAAAGACAT 120
Query 110 CGAGTTTGAAGTAATTCATGTAGATCTCGACAAACTTGAACAGAAAAAACCAGAACATCT 169
||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||
Sbjct 121 CGAGTTTGAAGTAATTCATGTCGATCTCGATAAACTTGAACAGAAAAAACCACAACATCT 180
Query 170 TCTTCGTCAGCCGTTTGGTCAAGTTCCAGCTATTGAAGATGGAGATCTAAAGCTTTTTGA 229
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 181 TCTTCGTCAGCCGTTTGGTCAAGTTCCAGCTATTGAAGATGGATATCTGAAGCTTTTTGA 240
Query 230 ATCGCGAGCCATAGCGAGGTACTACGCGACAAAGTATGCGGACCAAGGAACTGACCTATT 289
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 241 ATCGCGAGCCATAGCGAGGTACTACGCGACAAAGTATGCGGACCAAGGAACGGACCTATT 300
Query 290 GGGGAAGACATTGGAGAAACGAGCCATTGTGGACCAGTGGGTGGAAGTTGAGAATAACTA 349
||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GGGCAAGACTTTGGAGGGACGAGCCATTGTGGACCAGTGGGTGGAAGTTGAGAATAACTA 360
Query 350 CTTT-TACGCTGTGGCTCTACCCTTAGTTATTAACATCGTCTTTAAGCCCATGTTTGGTG 408
||| |||||||||||||||||||||||||| ||| ||||||||||||||| || ||||
Sbjct 361 -TTTCTACGCTGTGGCTCTACCCTTAGTTATGAACGTCGTCTTTAAGCCCAAGTCTGGTA 419
Query 409 AGCCAAT-CGACGTCGCTTTGGTTGAGGAGCTAAAGGTCAAGTTCGACAAGGTCTTGGAT 467
||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 420 AGCCA-TGCGACGTCGCTTTGGTTGAGGAGCTAAAGGTCAAGTTCGACAAGGTCCTGGAT 478
Query 468 GTGTATGAGAACCGGTTAGCTACGAACCGGTACTTGGGCGGTGATGAATTCACATTGGCT 527
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 479 GTGTATGAGAACCGGTTAGCTACGAACCGGTACTTGGGCGGTGATGAATTCACATTAGCT 538
Query 528 GATTTGACTCATATGCCCGGTATGAGATATATCATGAATGAAACCAGTTTGAGCGGTTTG 587
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 539 GATTTGAGTCATATGCCCGGTATGAGATATATCATGAATGAAACCAGTTTGAGTGGTTTG 598
Query 588 GTTACGTCTCGAGAGAATCTTAACCGGTGGTGGAATGAGATTTCCGCTAGACCGGCTTGG 647
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 599 GTTACGTCTCGAGAGAATCTCAACCGGTGGTGGAATGAGATTTCGGCTAGACCGGCTTGG 658
Query 648 AAGATGCTCATGGAATTGGCTGCCTATTAAATTATATGGATGGTTTAGTAGTTCTTGTAG 707
|||| ||||||||||||||||||||||||| || | | | | ||||||||||||||
Sbjct 659 AAGAAGCTCATGGAATTGGCTGCCTATTAA-TT-T--G--TC-T--AGTAGTTCTTGTAG 709
Query 708 TCCTCC 713
||||||
Sbjct 710 TCCTCC 715
> AT5G17220.1 | Symbols: ATGSTF12, GST26, TT19, GSTF12 | glutathione
S-transferase phi 12 | chr5:5658460-5659386 FORWARD LENGTH=777
Length=777
Score = 348 bits (188), Expect = 5e-95
Identities = 502/649 (77%), Gaps = 40/649 (6%)
Strand=Plus/Plus
Query 32 AATGGTGGTCAAAGTATATGGGCAGATAAAAGCAGCTAATCCACAAAGAGTATTGCTCTG 91
|||||| || ||| ||||||| ||| ||| ||||||| |||||||||||| ||||| ||
Sbjct 68 AATGGTTGTGAAACTATATGGACAGGTAACAGCAGCTTGTCCACAAAGAGTCTTGCTTTG 127
Query 92 TTTTTTGGA-AAAAGACATCGAGTTTGAAG-TAATTCATGTAGATCTCGACAAACTTGAA 149
|||| | || ||| || || || |||| || | |||||| | ||||| || | | ||||
Sbjct 128 TTTTCTCGAGAAAGGA-ATTGAATTTG-AGATTATTCATATCGATCTTGATACATTTGAG 185
Query 150 CAGAAAAAACCAGAACATCTTCTTCGTCAGCCGTTTGGTCAAGTTCCAGCTATTGAAGAT 209
|| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct 186 CAAAAAAAACCAGAACATCTTCTTCGTCAGCCATTTGGTCAAGTTCCAGCCATAGAAGAT 245
Query 210 GGAGATCTAAAGCTTTTTGAATCGCGAGCCATAGCGAGGTACTACGCGACAAAGTAT-GC 268
|||||| | |||||||||||||| |||||||| ||||| |||||||| || |||| | ||
Sbjct 246 GGAGATTTCAAGCTTTTTGAATCACGAGCCATCGCGAGATACTACGCTACCAAGT-TCGC 304
Query 269 GGACCAAGGAACTGA-CCTATTGGGGAAGACAT-TGGAGAAACGAGCCATTGTGGACCAG 326
||||||||| || || ||| ||||| ||| | | | ||| | |||||||| |||||||||
Sbjct 305 GGACCAAGGCAC-GAACCTTTTGGGCAAGTC-TCTAGAGCACCGAGCCATCGTGGACCAG 362
Query 327 TGGG-TGGAAGTTGAGAA-TAACTACTTTTACGCTGTGGCTCTACCCTTAGTTATTAACA 384
|||| || | || |||| || ||||| ||| | |||| | |||| | || ||||||
Sbjct 363 TGGGCTG-ACGTGGAGACCTAT-TACTTCAACGTTCTGGCCCAACCCCTCGTGATTAACC 420
Query 385 TCGTCTTTAAGCCCATGTTTGGTGAGCCAATC-GACGTCGCTTTGGTTGAGGAGCT-AAA 442
| || | ||||| | ||| || ||| ||| ||||||| |||||| ||||| || |||
Sbjct 421 TAATCATCAAGCCTAGGTTAGGCGAGA-AATGTGACGTCGTTTTGGTCGAGGATCTCAAA 479
Query 443 GGTCAAGTTCG-ACAAGGTCTTGGATGTGTATGAGAACCGG-TTAGCTACGAACCGGTAC 500
| | ||| | | | ||||||||| | || | |||||| || || |||||||||
Sbjct 480 G-TGAAGCTAGGAGT-GGTCTTGGACATATACAATAACCGGCTTT-CTTCGAACCGGTTT 536
Query 501 TTGGGC-GGTGATGAATTCAC-ATTGGCTGATTTGACTCATATGCCCG-GTATGAGATA- 556
|||| | ||||| |||||||| || |||||||||||| || ||||| | | ||| | ||
Sbjct 537 TTGG-CTGGTGAAGAATTCACTAT-GGCTGATTTGACGCACATGCCGGCG-ATGGGGTAC 593
Query 557 TATCATGAATGA-AACCAGTT-TGAGCG-GTTTGGTTACGTCTCGAGAGAA-TCTTAACC 612
| | |||| | | |||| | | | | | | | ||||| | |||| | | | | ||||||
Sbjct 594 T-TGATGAGT-ATAACC-GATATAAACCAGAT-GGTTAAGGCTCGGG-GTAGTTTTAACC 648
Query 613 GGTGGTGG-AATGAGATTTCCGCTAGACCGGCTTGGAAGATGCTCATGG 660
|||||||| || |||||||| | ||||||| ||||||||| ||| ||||
Sbjct 649 GGTGGTGGGAA-GAGATTTCGGATAGACCGTCTTGGAAGAAGCTTATGG 696
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 36871863898
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5