BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477569
Length=1064
Score E
Sequences producing significant alignments: (Bits) Value
AT3G03230.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1574 0.0
AT3G03240.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 966 0.0
> AT3G03230.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:744389-746009 REVERSE LENGTH=1091
Length=1091
Score = 1574 bits (852), Expect = 0.0
Identities = 950/998 (95%), Gaps = 4/998 (0%)
Strand=Plus/Plus
Query 1 ATGGTGCTTTTACTTGTGATTGTGGGGCTGATAAGCTATTATGTCTACAAGTCCATAATA 60
||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| |
Sbjct 1 ATGGTGCTTCTACTTGTGATTGTGGGATTAATAAGCTATTATGTCTACAAGTCCATAACA 60
Query 61 CCGCCACCACCGATCCCATTGCCGGAAAATGTTTCCGAGATATCTCCAAGAATCAAGCTT 120
||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CCGCCGCCACCGATTCCACTGCCGGAAAATGTTTCCGAGATATCTCCAAGAATCAAGCTC 120
Query 121 AATGATGGGAGGCATTTAGCGTACAAAGAATTAGGGTTTCCAAAGGACAAAGCCAAAAAC 180
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 121 AATGATGGAAGGCATTTAGCGTACAAGGAATTAGGGTTTCCAAAGGACAAAGCCAAAAAC 180
Query 181 AAAATAATAATCGTCCACGGAAATGGAAATTCCAAAGACGTCGATTTATACATCACACAG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AAAATAATAATCGTCCACGGAAATGGAAATTCCAAAGACGTCGATTTATACATCACACAG 240
Query 241 GAAATGATTGACGAATTCAAGATATACTTTTTGTTCTTCGATAGAGCTGGTTATGGAGAA 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GAAATGATTGATGAATTCAAGATATACTTTTTGTTCTTCGATAGAGCTGGTTATGGAGAA 300
Query 301 AGCGATCCTAATCCAACACGAACGCTGAGAACTGATACATACGATATCGAAGAACTTGCT 360
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 301 AGCGATCCTAATCCAACACGAACGCTGAAAACAGATACATACGATATCGAAGAACTTGCT 360
Query 361 GACAAATTGCAAATCGGTCCAAAGTTCCACGTTATAGGCATGTCACTTGGAGCTTACCCA 420
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GACAAATTGCAAGTCGGTCCAAAGTTCCACGTTATAGGCATGTCACTTGGAGCTTACCCT 420
Query 421 GTTTACGGTTGCCTCAAATACATTCCTCATAGGCTTAGTGGAGCTTCGTTGGTGGTTCCG 480
||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||
Sbjct 421 GTTTACGGTTGCCTCAAATACATTCCTAATAGGCTCAGTGGAGCTTCGTTGGTTGTTCCG 480
Query 481 TTAATAAATTTTTGGTGGAGCCGTGTGCCTCAAAACTTATTGAATGCAGCAATGAAGAAA 540
||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 481 TTAGTGAATTTTTGGTGGAGCCGTGTGCCTCAAAACTTATTGAATGCAGCGATGAAGAAA 540
Query 541 TTGCCAATTGGATTTCAGTTGACACTTCGAGTTGCACACTACTCTCCATGGTTGTTATAT 600
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 541 TTGCCAATTGGATTTCAATTGACACTTCGAGTCGCACACTACTCTCCATGGTTGTTATAT 600
Query 601 TGGTGGATGACTCAGAAATGGTTCCCAAATAGTCGAAATCCCAAAGATACAATGACCGAG 660
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 601 TGGTGGATGACTCAGAAATGGTTCCCGAATAGTCGAAATCCCAAAGATACTATGACCGAG 660
Query 661 CGCGACCTAGAACTCGCGGAAAAGCATACAAAACACTCCTATATCAAAGAGTCTGCTTTA 720
||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct 661 CGCGACCTAGAACTCGCGGAAAAGCATACCAAACACTCTTATATCAAGGAGTCTGCTTTA 720
Query 721 CGACAAGGTG-ATTATGTGAGCACACAACGAGACATCATTGCAGGTTATGGGAATTGGGA 779
|||||||||| || |||||| |||||||| ||||||||| || ||||| |||||||||||
Sbjct 721 CGACAAGGTGGAT-ATGTGACCACACAACAAGACATCATAGCGGGTTACGGGAATTGGGA 779
Query 780 ATTTGATCCAACGGAATTGA-GCAATCCGTTTTTGGATAGTAAGAAAGGGTCGGTTCATA 838
|||||||||||| ||||||| | |||||||||| ||||||||| ||||||||||||||||
Sbjct 780 ATTTGATCCAACCGAATTGAAG-AATCCGTTTTCGGATAGTAACAAAGGGTCGGTTCATA 838
Query 839 TGTGGTGTGCACTCGAAGACAAACAAATTTCACGAGATGTTTTAATTTATATATGTGATA 898
|||||||||||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct 839 TGTGGTGTGCACTCGAAGACAAACAAATTTCACGCGATGTTTTACTCTATATATGCGATA 898
Query 899 AGCTGCCATGGATAAAGCTCCATGAGGTCCCTGATGGTGGACATTACATTATCCATGAGA 958
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 899 AACTGCCATGGATAAAGCTCCATGAGGTCCCTGATGGTGGACATTATATTATCCATGAGA 958
Query 959 AGCGGCATTTCGAAGCCATTATCAAAGCCGCTTGTAGT 996
|||||||||| |||||||||||||||||||||||||||
Sbjct 959 AGCGGCATTTTGAAGCCATTATCAAAGCCGCTTGTAGT 996
Score = 99.0 bits (53), Expect = 8e-20
Identities = 64/69 (93%), Gaps = 1/69 (1%)
Strand=Plus/Plus
Query 997 aaaaaaaCTCTATAAGATTTGTATATGAAATCAGTTTGAG-AAAATTATGGCTATGTAAG 1055
|||||||||||| ||||||||||| | |||||||||| || |||||||||||||||||||
Sbjct 1023 AAAAAAACTCTAAAAGATTTGTATCTAAAATCAGTTTAAGAAAAATTATGGCTATGTAAG 1082
Query 1056 TTTCATGTG 1064
|||||||||
Sbjct 1083 TTTCATGTG 1091
> AT3G03240.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:746655-748600 REVERSE LENGTH=1243
Length=1243
Score = 966 bits (523), Expect = 0.0
Identities = 832/980 (85%), Gaps = 25/980 (3%)
Strand=Plus/Plus
Query 31 ATAAGCTATTATGTCTACAAGTCCAT-AATACCGCCACCACCGATCCCATTGCCGGAAAA 89
||| ||| ||| |||||||||||| | || |||||| || || || ||||||||||| ||
Sbjct 146 ATATGCTTTTACGTCTACAAGTCCGTGAA-ACCGCCGCCGCCAATTCCATTGCCGGAGAA 204
Query 90 TGTTTCCGAGATATCTCCAAGAATCAAGCTTAATGATGGGAGGCATTTAGCGTACAAAGA 149
|||||| ||||||||||||||||||||||| || ||||| || ||||||| ||||||||
Sbjct 205 TGTTTCTGAGATATCTCCAAGAATCAAGCTCAACGATGGCAGATATTTAGCTTACAAAGA 264
Query 150 ATTAGGGTTTCC-AAAGGACAAAGCCAAAAACAAAATAAT-AATCGTCCACGGAAAT-GG 206
|||||||||||| ||| |||||||||||||| || || || | || |||| || | | ||
Sbjct 265 ATTAGGGTTTCCTAAA-GACAAAGCCAAAAATAAGATTATCATTC-TCCATGG-ATTCGG 321
Query 207 AAATTCCAAAG--ACGTCGATTTATACATCACACAGGAAATGATTGACGAATTCAAGATA 264
| |||| ||| | || |||||| | ||||||||||||||||| ||||||||| |||||
Sbjct 322 GAGTTCC-AAGTTA-GTGGATTTAAAAATCACACAGGAAATGATCGACGAATTCGAGATA 379
Query 265 TACTTTTTGTTCTTCGATAGAGCTGGTTATGGAGAAAGCGATCCTAATCCAACACGAACG 324
||||| ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 380 TACTTCTTGTTGTTCGATAGAGCTGGTTATGGAGAAAGCGATCCTCATCCATCACGAACA 439
Query 325 CTGAGAACTGATACATACGATATCGAAGAACTTGCTGACAAATTGCAAATCGGTCCAAAG 384
|| | ||| |||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 440 CTAAAAACGGATACATATGACATCGAAGAACTTGCTGACAAATTGCAAATCGGTCCAAAG 499
Query 385 TTCCACGTTATAGGCATGTCACTTGGAGCTTACCCAGTTTACGGTTGCCTCAAATACATT 444
||||| || |||| |||||||| || ||||| ||||||||||| || ||||| ||||||
Sbjct 500 TTCCATGTCCTAGGAATGTCACTCGGGGCTTATCCAGTTTACGGCTGTCTCAAGTACATT 559
Query 445 CCTCATAGGCTTAGTGGAGCTTCGTTGGTGGTTCCGTTAATAAATTTTTGGTGGAGCCGT 504
|||||||| || |||||||| |||||||||||||| || | |||||||||||||| ||
Sbjct 560 CCTCATAGACTAAGTGGAGCAACGTTGGTGGTTCCGATACTGAATTTTTGGTGGAGTTGT 619
Query 505 GTGCCTCAAAACTTATTGAATGCAGCAATGAAGAAATTGCCAATTGGATTTCAGTTGACA 564
|||||| |||||| | || | |||| | ||||||||||||||| | ||||| ||||
Sbjct 620 CTGCCTCTAAACTTGTCGATTTCAGCGTTCAAGAAATTGCCAATTCAAAATCAGTGGACA 679
Query 565 CTTCGAGTTGCACACTACTCTCCATGGTTGTTATATTGGTGGATGACTCAGAAATGGTT- 623
||| |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 680 CTTGGAGTCGCACACTACTTTCCATGGTTATTATATTGGTGGATGACTCAGAAATGGTTT 739
Query 624 -CCCAAAT-AGTC-GAAATCCCAAAGATACAATGACCGAGCGCGACCTAGAACTCGCGGA 680
||| | | |||| ||| ||| | ||| || |||||||||||||| |||| ||||||||
Sbjct 740 TCCCCATTTAGTCAGAA-TCCTAGAGAAACTATGACCGAGCGCGATATAGAGCTCGCGGA 798
Query 681 AAAGCATACAAAACACTCCTATATCAAAGAGTCTGCTTTACGACAAGGTGATTATGTGAG 740
||||||||||||||| | ||||| || || || || ||||||||||||| ||||||||
Sbjct 799 TAAGCATACAAAACACGCATATATTAAGGAATCCGCACTACGACAAGGTGAATATGTGAG 858
Query 741 CACACAACGAGACATCATTGCAGGTTATGGGAATTGGGAATTTGATCCAACGGAATTGAG 800
|| ||||||||||||||||| ||||| | ||||||||| ||||||||||| ||| ||||
Sbjct 859 CATGCAACGAGACATCATTGCGGGTTACGAGAATTGGGAGTTTGATCCAACCGAACTGAG 918
Query 801 CAATCCGTTTTTGGAT-AGTAAGAAAGGGTCGGTTCATATGTGGTGTGCACTCGAAGACA 859
|||||| |||| ||| | ||| |||||||| ||||| || |||||||||||||||||||
Sbjct 919 CAATCCATTTTCAGATGA-TAACAAAGGGTCAGTTCACATTTGGTGTGCACTCGAAGACA 977
Query 860 AACAAATTTCACGA-GATGTTTTAATTTA-TATATGTGATAAGCTGCCATGGATAAAGCT 917
|||||||||| | | || |||||| | || | ||||||||||||| ||||||||||||||
Sbjct 978 AACAAATTTCGC-ATGAGGTTTTACTCTACT-TATGTGATAAGCTTCCATGGATAAAGCT 1035
Query 918 CCATGAGGTCCCTGATGGTGGACAT-TACATTATCCATGAGAAGCGGCATTTCGAAGCCA 976
||||| |||||||||| ||||||| | |||||||||||||||| |||||| |||| ||
Sbjct 1036 TCATGAAGTCCCTGATGCTGGACATCTT-ATTATCCATGAGAAGCAGCATTTTGAAGACA 1094
Query 977 TTATCAAAGCCGCTTGTAGT 996
|||| |||||||||||||||
Sbjct 1095 TTATTAAAGCCGCTTGTAGT 1114
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 52108165710
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5