BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477570
Length=1132
Score E
Sequences producing significant alignments: (Bits) Value
AT3G03240.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1820 0.0
AT3G03230.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 972 0.0
> AT3G03240.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:746655-748600 REVERSE LENGTH=1243
Length=1243
Score = 1820 bits (985), Expect = 0.0
Identities = 1087/1136 (96%), Gaps = 8/1136 (1%)
Strand=Plus/Plus
Query 1 CCTTTGTCTTGTCTTTTGGTTAGTATAAGTATTGATAAATTCCTTTGACCAGC--GATAT 58
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1 CCTCTGTCTTGTCTTTTGGTTAGTATAAGTATTGATAAATTCCTTTGACCAGCAAGATAT 60
Query 59 CATCACTAAAAGATTTTACATTACCAAGCAATCTCTCGAATATCATCAGGTCATA-TGAT 117
||||||||||||||||||||||||||||| ||||| | ||||||||||||||| | ||||
Sbjct 61 CATCACTAAAAGATTTTACATTACCAAGCCATCTC-C-AATATCATCAGGTCA-AGTGAT 117
Query 118 GTTGTTTCTAGTTGCGGCTGTCGGTTTAATA-GCCTATTATGTCTACAAGTCCATAAAAC 176
|||||||||| ||||||||| |||||||| | || ||| |||||||||||| | ||||
Sbjct 118 GTTGTTTCTAACCGCGGCTGTCTGTTTAATATG-CTTTTACGTCTACAAGTCCGTGAAAC 176
Query 177 CGCCGCCGCCAATTCCATTGCCGGAGAATGTTTCTGAGATATCTCCAAGAATCAAACTCA 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 177 CGCCGCCGCCAATTCCATTGCCGGAGAATGTTTCTGAGATATCTCCAAGAATCAAGCTCA 236
Query 237 ACGATGGCAGATATTTAGCCTACAGAGAATTAGGGTTTCCAAAAGACAAAGCCAAAAATA 296
||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||
Sbjct 237 ACGATGGCAGATATTTAGCTTACAAAGAATTAGGGTTTCCTAAAGACAAAGCCAAAAATA 296
Query 297 AGATTATCATTCTCCATGGATTCGGGAGTTCCAAGTTAGTGGATTTAAAAATCACACAGG 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGATTATCATTCTCCATGGATTCGGGAGTTCCAAGTTAGTGGATTTAAAAATCACACAGG 356
Query 357 AAATGGTCGACGAATTCGAGATATACTTCTTGCTCTTTGATAGAGCTGGTTATGGAGAAA 416
||||| |||||||||||||||||||||||||| | || ||||||||||||||||||||||
Sbjct 357 AAATGATCGACGAATTCGAGATATACTTCTTGTTGTTCGATAGAGCTGGTTATGGAGAAA 416
Query 417 GCGATCCTCATCCATCACGAACACTAAAAACAGATACATATGATATCGAAGAACTTGCTG 476
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 417 GCGATCCTCATCCATCACGAACACTAAAAACGGATACATATGACATCGAAGAACTTGCTG 476
Query 477 ATAAATTGCAAATTGGTCCAAAGTTCCATGTCTTAGGAATGTCACTCGGGGCTTATCCAG 536
| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 477 ACAAATTGCAAATCGGTCCAAAGTTCCATGTCCTAGGAATGTCACTCGGGGCTTATCCAG 536
Query 537 TTTACGGCTGTCTCAAGTACATTCCTCATAGATTAAGTGGAGCAACGTTGGTGGTTCCGT 596
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 537 TTTACGGCTGTCTCAAGTACATTCCTCATAGACTAAGTGGAGCAACGTTGGTGGTTCCGA 596
Query 597 TACTGAATTTTTGGTGGAGTCGTCTGCCTCTAAACTTGTCGATTTCAGCGTTCAAGAAAT 656
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 597 TACTGAATTTTTGGTGGAGTTGTCTGCCTCTAAACTTGTCGATTTCAGCGTTCAAGAAAT 656
Query 657 TGCCAATTCAAAATCAGTGGACACTTGGAGTCGCACACTACTTTCCATGGTTATTATATT 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 TGCCAATTCAAAATCAGTGGACACTTGGAGTCGCACACTACTTTCCATGGTTATTATATT 716
Query 717 GGTGGATGACTCAGAAATGGTTCTCCCCATTTAGTCAGAATCCTAGAGAAACTATGACCG 776
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 717 GGTGGATGACTCAGAAATGGTTTTCCCCATTTAGTCAGAATCCTAGAGAAACTATGACCG 776
Query 777 AGCGCGATATAGAACTTGCGGATAAGCATACAAAACACTCATACATCAAGGAATCCGCAC 836
||||||||||||| || ||||||||||||||||||||| |||| || |||||||||||||
Sbjct 777 AGCGCGATATAGAGCTCGCGGATAAGCATACAAAACACGCATATATTAAGGAATCCGCAC 836
Query 837 TACGACAAGGTGAATATGTGAGCATGCAACGAGACATCATTGCGGGTTACCAGAATTGGG 896
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 837 TACGACAAGGTGAATATGTGAGCATGCAACGAGACATCATTGCGGGTTACGAGAATTGGG 896
Query 897 AGTTTGATCCAACCGAACTGAGCAATCCATTTTCAGATGATAACAAAGGGTCAGTTCACA 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 AGTTTGATCCAACCGAACTGAGCAATCCATTTTCAGATGATAACAAAGGGTCAGTTCACA 956
Query 957 TTTGGTGTGCACTTGAAGACAAACAAATTTCGCATGAAGTTTTACTCTACTTATGTGATA 1016
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 957 TTTGGTGTGCACTCGAAGACAAACAAATTTCGCATGAGGTTTTACTCTACTTATGTGATA 1016
Query 1017 AGCTTCCATGGATAACGCTTCATGAAGTCCCTGAGGCTGGACATCTCATTATCCATGAGA 1076
||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1017 AGCTTCCATGGATAAAGCTTCATGAAGTCCCTGATGCTGGACATCTTATTATCCATGAGA 1076
Query 1077 AGCAGCATTTTGAAGACATTATTAAAGCCGCTTGTAGTTGAATGTGAAAAGAAAAA 1132
|||||||||||||||||||||||||||||||||||||||||| || |||| |||||
Sbjct 1077 AGCAGCATTTTGAAGACATTATTAAAGCCGCTTGTAGTTGAAGGTTAAAAAAAAAA 1132
> AT3G03230.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:744389-746009 REVERSE LENGTH=1091
Length=1091
Score = 972 bits (526), Expect = 0.0
Identities = 855/1012 (84%), Gaps = 29/1012 (3%)
Strand=Plus/Plus
Query 116 ATGTTGTTTCTAGTTGCGGCTGTCGGTTTAAT-AGCCTATTATGTCTACAAGTCCATAAA 174
||| || ||||| ||| | ||| || ||||| || |||||||||||||||||||||||
Sbjct 1 ATGGTGCTTCTACTTGTGATTGTGGGATTAATAAG-CTATTATGTCTACAAGTCCATAAC 59
Query 175 ACCGCCGCCGCCAATTCCATTGCCGGAGAATGTTTCTGAGATATCTCCAAGAATCAAACT 234
||||||||| || |||||| ||||||| |||||||| |||||||||||||||||||| ||
Sbjct 60 ACCGCCGCCACCGATTCCACTGCCGGAAAATGTTTCCGAGATATCTCCAAGAATCAAGCT 119
Query 235 CAACGATGGCAGATATTTAGCCTAC-AGAGAATTAGGGTTTCCAAAAGACAAAGCCAAAA 293
||| ||||| || ||||||| ||| || ||||||||||||||||| |||||||||||||
Sbjct 120 CAATGATGGAAGGCATTTAGCGTACAAG-GAATTAGGGTTTCCAAAGGACAAAGCCAAAA 178
Query 294 ATAAGATTATCATTC-TCCATGG-ATTCGGGAGTTCC-AAGTTA-GTGGATTTAAAAATC 349
| || || || | || |||| || | | || | |||| ||| | || |||||| | |||
Sbjct 179 ACAAAATAAT-AATCGTCCACGGAAAT-GGAAATTCCAAAG--ACGTCGATTTATACATC 234
Query 350 ACACAGGAAATGGTCGACGAATTCGAGATATACTTCTTGCTCTTTGATAGAGCTGGTTAT 409
|||||||||||| | || |||||| |||||||||| ||| |||| |||||||||||||||
Sbjct 235 ACACAGGAAATGATTGATGAATTCAAGATATACTTTTTGTTCTTCGATAGAGCTGGTTAT 294
Query 410 GGAGAAAGCGATCCTCATCCATCACGAACACTAAAAACAGATACATATGATATCGAAGAA 469
||||||||||||||| ||||| ||||||| || |||||||||||||| ||||||||||||
Sbjct 295 GGAGAAAGCGATCCTAATCCAACACGAACGCTGAAAACAGATACATACGATATCGAAGAA 354
Query 470 CTTGCTGATAAATTGCAAATTGGTCCAAAGTTCCATGTCT-TAGGAATGTCACTCGGGGC 528
|||||||| ||||||||| | |||||||||||||| || | |||| |||||||| || ||
Sbjct 355 CTTGCTGACAAATTGCAAGTCGGTCCAAAGTTCCACGT-TATAGGCATGTCACTTGGAGC 413
Query 529 TTATCCAGTTTACGGCTGTCTCAAGTACATTCCTCATAGATTAAGTGGAGCAACGTTGGT 588
||| || |||||||| || ||||| ||||||||| |||| | |||||||| |||||||
Sbjct 414 TTACCCTGTTTACGGTTGCCTCAAATACATTCCTAATAGGCTCAGTGGAGCTTCGTTGGT 473
Query 589 GGTTCCGTTACTGAATTTTTGGTGGAGTCGTCTGCCTCTAAACTTGTCGATTTCAGCGTT 648
||||||||| |||||||||||||||| ||| |||||| |||||| | || | ||||| |
Sbjct 474 TGTTCCGTTAGTGAATTTTTGGTGGAGCCGTGTGCCTCAAAACTTATTGAATGCAGCGAT 533
Query 649 CAAGAAATTGCCAATTCAAAATCAGTGGACACTTGGAGTCGCACACTACTTTCCATGGTT 708
||||||||||||||| | ||| | ||||||| ||||||||||||||| |||||||||
Sbjct 534 GAAGAAATTGCCAATTGGATTTCAATTGACACTTCGAGTCGCACACTACTCTCCATGGTT 593
Query 709 ATTATATTGGTGGATGACTCAGAAATGGTTCTCCCCATTTAGTCAGAA-TCCTAGAGAAA 767
|||||||||||||||||||||||||||||| || || |||| ||| ||| | ||| |
Sbjct 594 GTTATATTGGTGGATGACTCAGAAATGGTTC-CCGAAT--AGTC-GAAATCCCAAAGATA 649
Query 768 CTATGACCGAGCGCGATATAGAACTTGCGGATAAGCATACAAAACACTCATACATCAAGG 827
|||||||||||||||| ||||||| ||||| |||||||| |||||||| || |||||||
Sbjct 650 CTATGACCGAGCGCGACCTAGAACTCGCGGAAAAGCATACCAAACACTCTTATATCAAGG 709
Query 828 AATCCGCACTACGACAAGGTGAATATGTGAGCATGCAACGAGACATCATTGCGGGTTACC 887
| || || |||||||||||| |||||||| || |||| ||||||||| |||||||||
Sbjct 710 AGTCTGCTTTACGACAAGGTGGATATGTGACCACACAACAAGACATCATAGCGGGTTACG 769
Query 888 AGAATTGGGAGTTTGATCCAACCGAACTGA-GCAATCCATTTTCAGAT-GATAACAAAGG 945
||||||||| ||||||||||||||| ||| | ||||| ||||| ||| | |||||||||
Sbjct 770 GGAATTGGGAATTTGATCCAACCGAATTGAAG-AATCCGTTTTCGGATAG-TAACAAAGG 827
Query 946 GTCAGTTCACATTTGGTGTGCACTTGAAGACAAACAAATTTCGCATGAAGTTTTACTCTA 1005
||| ||||| || ||||||||||| ||||||||||||||||| | || |||||||||||
Sbjct 828 GTCGGTTCATATGTGGTGTGCACTCGAAGACAAACAAATTTCACGCGATGTTTTACTCTA 887
Query 1006 CT-TATGTGATAAGCTTCCATGGATAACGCTTCATGAAGTCCCTGA-GGCTGGACATC-T 1062
| |||| ||||| || |||||||||| ||| ||||| |||||||| || ||||||| |
Sbjct 888 -TATATGCGATAAACTGCCATGGATAAAGCTCCATGAGGTCCCTGATGG-TGGACATTAT 945
Query 1063 CATTATCCATGAGAAGCAGCATTTTGAAGACATTATTAAAGCCGCTTGTAGT 1114
|||||||||||||||| ||||||||||| |||||| |||||||||||||||
Sbjct 946 -ATTATCCATGAGAAGCGGCATTTTGAAGCCATTATCAAAGCCGCTTGTAGT 996
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55521802770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5