BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477582
Length=1063
Score E
Sequences producing significant alignments: (Bits) Value
AT3G03330.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1604 0.0
AT3G03350.2 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 640 0.0
> AT3G03330.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr3:783332-786209 REVERSE LENGTH=1288
Length=1288
Score = 1604 bits (868), Expect = 0.0
Identities = 976/1028 (95%), Gaps = 8/1028 (1%)
Strand=Plus/Plus
Query 1 AAGACTTGGTCTCTCGCT-GTTGCTTCAATCCGAGAAAATGCTGACTCTACTCTTCTTCT 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 24 AAGACTTGGTCTCTCGCTGGTTGCTTCAATCCGAGAAAATGCTGACTCTACTCTTCTTCT 83
Query 60 CTCTCGGA--G-TCCTTCTTATCGGTCTGCTCTTCAAATTCGCACTT-GCCGATGGAGAT 115
|||||||| | | |||||||||| ||||||||||||||| ||| || ||||||||||||
Sbjct 84 CTCTCGGAGCGCTTCTTCTTATCGTTCTGCTCTTCAAATTTGCA-TTCGCCGATGGAGAT 142
Query 116 TTTACCCTGATTTCGAAGAAGCATGTGAAGCGTGAAGCCATACAAGGAAAGGTCGTCTGG 175
|||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 143 TTTACCTTGATTTCGAAGAAGCATGTGAAGCGTGAGGCCATACAAGGCAAGGTCGTCTGG 202
Query 176 ATCACAGGGGCTAGCCGTGGGATTGGGGAAATTCTTGCTAAACAGTTTGCAAGTTTAGAT 235
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 203 ATCACAGGGGCTAGCCGTGGAATTGGTGAAATTCTTGCTAAACAGTTTGCAAGTTTAGAT 262
Query 236 GCCAAGCTTATTCTCTCTGCGAGGAATAAAGCTGAACTGGAGAGAGTTAAGAGTGAGCTC 295
|||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||
Sbjct 263 GCCAAGCTTATTCTCTCTGCTAGGAATAAAGCTGAACTGGATCGGGTTAAGAGTGAGCTT 322
Query 296 AAAGGTAAATATGCACCAGAAGATGTCAAGGTTTTGCCTTTAGATTTAGCTAGTGGTGAA 355
|||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 323 AAAGGTAAATTTGCACCAGAAGATGTCAAGGTTTTGCCTTTAGATTTAGCTAGCGGCGAA 382
Query 356 GAGTCGCTCAAACATGTCGTAGAGCAAGCTGTGTCACTTTTCCCTGGGGCTGGTGTTGAT 415
||||| ||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct 383 GAGTCACTCAAACATGTTGTAGAGCAAGCAGTGTCGCTTTTCCCTGGAGCTGGTGTTGAT 442
Query 416 TATTTGGTTCACAATGCTGCCTATGAGCGTCCGAAATCCAAGGCATCTGATGCAACTGAG 475
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||
Sbjct 443 TATTTGGTTCACAATGCTGCCTTTGAGCGTCCGAAATCCAAGGCATCGGATGCAAGTGAG 502
Query 476 GAAACTCTCAAGACTACATTCGATGTTAATGTCTTTGGGACTATAACTCTTACAAAGTTG 535
||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||
Sbjct 503 GAAACTCTCAAGACTACATTCGATGTTAATGTCTTTGGGACGATATCTCTGACAAAGTTG 562
Query 536 GTAGCTTCTCATATGCTAAAACAAGGAGGCGGTCATTTCGTTGTGATAAGCAGTGCTGCA 595
|||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 563 GTAGCTCCTCATATGCTAAAACAAGGAGGGGGTCATTTTGTTGTGATAAGCAGTGCTGCA 622
Query 596 GGAAAGGTACCATCACCTGGACAGGCTATATATTCTGCTTCAAAACATGCTCTGCACGGC 655
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 623 GGAAAGGTACCATCACCTGGACAGGCTATATATTCTGCTTCAAAACATGCTCTTCATGGC 682
Query 656 TACTTCCACAGCTTGCGTTCTGAGTTTTGTCAGGAGGGAATCAAGGTTACCGTCGTTTGT 715
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 683 TACTTCCACAGCTTGCGTTCTGAGTTCTGTCAGAAGGGAATCAAGGTTACCGTCGTTTGT 742
Query 716 CCTGGTCCAATAGAAACCTTGAATGGTACAGGAACATCAACTTCGGAAGACAAG-AAGTC 774
||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||
Sbjct 743 CCTGGTCCAATAGAAACCTGGAATGGTACAGGAACATCAACTTCGGAAGACA-GCAAGTC 801
Query 775 TCCTGAGAAACGTGTGTCATCTGAACGATGTGCAGAACTGACTATAATCGCTGCGTCTCA 834
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 802 TCCTGAGAAACGTGTGTCATCTGAACGATGTGCAGAGCTGACTATAATCGCTGCATCTCA 861
Query 835 TAACTTGAAGGAAGCTTGGATTTCATATCAGCCGGTACTGCTCGTGATGTATCTAGTGCA 894
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 862 TAACTTGAAGGAAGCTTGGATTTCATATCAGCCAGTACTACTCGTGATGTATCTAGTGCA 921
Query 895 GTACATGCCTTCCCTTGGCTTCTGGCTCATGGACAAGGTTGGAGGGAAGCGTGTAGAGGT 954
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 922 GTACATGCCTTCCCTTGGCTTCTGGCTCATGGACAAGGTTGGAGGAAAGCGTGTGGAGGT 981
Query 955 CGCGGAAAAGAAAGGCAACACATACTCATGGAATTTACTGTTCGGGAAGAAGACCAAAAC 1014
||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct 982 CGCGGAAAAGAAAGGCAACACATACTCGTGGGATTTACTGTTCGGGAAGAAGACTAAAAC 1041
Query 1015 AAACTGAA 1022
||||||||
Sbjct 1042 AAACTGAA 1049
> AT3G03350.2 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr3:791183-794812 FORWARD LENGTH=1429
Length=1429
Score = 640 bits (346), Expect = 0.0
Identities = 396/420 (94%), Gaps = 4/420 (1%)
Strand=Plus/Plus
Query 448 GAAATCCAAGGCATCTGATGCAACTGAGGAAACTCTCAAGACTACATTCGATGTTAATGT 507
||||||||||||||| ||||||| |||||||||| |||| |||||||||||| | |||||
Sbjct 816 GAAATCCAAGGCATCGGATGCAAGTGAGGAAACTATCAATACTACATTCGATATCAATGT 875
Query 508 CTTTGGGACTATAACTCTTACAAAGTTGGT-AGCTTCTCATATGCTAAAACAAGGAGGCG 566
||||||||| |||||||||| ||||||||| | || ||||||||||||||||||||||||
Sbjct 876 CTTTGGGACGATAACTCTTATAAAGTTGGTCA-CTCCTCATATGCTAAAACAAGGAGGCG 934
Query 567 GTCATTTCGTTGTGATAAGCAGTGCTGCAGGAAAGGTACCATCACCTGGACAGGCTATAT 626
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 935 GTCATTTTGTTGTGATAAGCAGTGCTGCAGGAAAGGTACCATCACCTGGACAGGCTATAT 994
Query 627 ATTCTGCTTCAAAACATGCTCTGCACGGCTACTTCCACAGCTTGCGTTCTGAGTTTTGTC 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 995 ATTCTGCTTCAAAACATGCTCTGCACGGCTACTTCCACAGCTTGCGTTCTGAGTTCTGTC 1054
Query 687 AGGAGGGAATCAAGGTTACCGTCGTT-TGTCCTGGTCCAATAGAAACCTTGAATGGTACA 745
||||||||||||| || ||||||||| | |||||||||||||||||| ||||||||||||
Sbjct 1055 AGGAGGGAATCAAAGTGACCGTCGTTAT-TCCTGGTCCAATAGAAACGTTGAATGGTACA 1113
Query 746 GGAACATCAACTTCGGAAGACAAGAAGTCTCCTGAGAAACGTGTGTCATCTGAACGATGT 805
||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |
Sbjct 1114 GGAACATCAACTTCGGAAGACAAGAAGTCTCATGAGAAGCGTGTGTCATCTGAATGATAT 1173
Query 806 GCAGAACTGACTATAATCGCTGCGTCTCATAACTTGAAGGAAGCTTGGATTTCATATCAG 865
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 1174 GCAGAACTGACTATAATCGCCGCGTCTCATAGCTTGAAGGAAGCTTGGATTTCATATCAG 1233
Score = 93.5 bits (50), Expect = 4e-18
Identities = 54/56 (96%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 860 TATCAGCCGGTACTGCTCGTGATGTATCTAGTGCAGTACATGCCTTCCCTTGGCTT 915
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1305 TATCAGCCAGTACTGCTTGTGATGTATCTAGTGCAGTACATGCCTTCCCTTGGCTT 1360
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 52057965165
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5