BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477599
Length=1572
Score E
Sequences producing significant alignments: (Bits) Value
AT3G03540.1 | Symbols: NPC5 | non-specific phospholipase C5 | c... 2257 0.0
AT3G03530.1 | Symbols: NPC4 | non-specific phospholipase C4 | c... 1753 0.0
> AT3G03540.1 | Symbols: NPC5 | non-specific phospholipase C5 |
chr3:846350-848297 REVERSE LENGTH=1566
Length=1566
Score = 2257 bits (1222), Expect = 0.0
Identities = 1443/1551 (93%), Gaps = 9/1551 (1%)
Strand=Plus/Plus
Query 8 AGACGCAAAAAGGCTCAGTATCATCGTATCCGATCAAAACCATCGTCGTTTTAGTCCAAG 67
||||| |||||||||||| | |||||||||||||||||||||||||||||| || ||||
Sbjct 8 AGACGAAAAAAGGCTCAG-A--ATCGTATCCGATCAAAACCATCGTCGTTTTGGTTCAAG 64
Query 68 AGAATCGTTCTTTCGACCACACACTTGGCTGGTTCAAAGAGCTAAACCGGGAAATTGATG 127
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 65 AGAATCGTTCTTTCGACCACACACTTGGCTGGTTCAAAGAGCTAAACCGGGAAATTGACG 124
Query 128 GAGTCGTCAAATCGGACCTGAAATTCAACCC-GGTTTTGTCTTCCGACCAAAATTCTCAC 186
||||| | |||||||||| |||||||||||| |||||| || || |||| |||||| |||
Sbjct 125 GAGTCATGAAATCGGACCAGAAATTCAACCCGGGTTTT-TCCTCTGACCTAAATTCCCAC 183
Query 187 AATATCGTCTTCGGTGACCAGTCTCAGTACGTTGACCCGAATCCAGGTCACTCCATTCGG 246
|| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 AACGTCGTCTTTGGCGACCAGTCTCAGTACGTTGACCCGAATCCAGGTCACTCCATTCGG 243
Query 247 GATATTTACGAACAAGTGTTTGGTAAGCCATGGGATTCGGTTCACCCGGATCCAAACCCG 306
|||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||||
Sbjct 244 GATATTTACGAACAAGTGTTCGGTAAACCATGGGATTCGGGTCACCCGGACCCAAACCCG 303
Query 307 GGTCCAGCTAAAATGTCCGGATTTGCCCAAAACGCCGAACGGAAGATGAAAGGGATGTCA 366
|||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 304 GGTCCAGCTACAATGTCCGGATTTGCCCAAAACGCCGAGCGAAAGATGAAAGGGATGTCT 363
Query 367 TCTGCGGTTATGAACGGATTTAAACCGGATGCTTTGCCGGTTTACAAGGAATTGGTTCAA 426
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 364 TCTGCGGTTATGAACGGATTTAAACCGGACGCTTTGCCGGTTTACAAGGAATTGGTTCAA 423
Query 427 AAATTCGCCATATGTGATAGGTGGTTTGCGTCAGTTCCTGGTGCAACACAGCCAAACCGA 486
|| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 424 AATTTCGCTATATGTGATAGGTGGTTTGCGTCGGTTCCGGGTGCAACACAGCCAAACCGA 483
Query 487 TTGTTTGTCCACTCAGCAACATCACATGGAACAACGAACAACGAGAGGAAATTACTAATC 546
|||||| | || || ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 484 TTGTTTATACATTCGGCAACATCACACGGAACAACGAACAACGAGAGGAAATTACTGATC 543
Query 547 GAAGGTTTTCCACAAAAGACGATATTCGAGTCACTCGATGAAGCCGGTTTTACCTTTGGG 606
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 544 GAAGGTTTTCCACAAAAGACGATATTCGAGTCACTCGATGAAGCTGGTTTTACCTTTGGG 603
Query 607 ATTTATTACCAATGTTTTCCTACTACTCTCTTTTATAGGAATTTGAGAAAACTCAAGTAT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 ATTTATTACCAATGTTTTCCTACTACTCTCTTTTATAGGAATTTGAGAAAACTCAAGTAT 663
Query 667 TTGACACGTTTCCACGACTACGGACTACAATTCAAGAAAGATTGTAAAGAAGGGAAGCTA 726
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 664 TTGACACGTTTCCACGACTACGGACTACAATTCAAGAAAGATTGTAAAGAAGGGAATCTA 723
Query 727 CCGAACTACGTTGTGGTTGAACAACGCTGGTATGATCTATTGTCGAATCCCGCTAACGAC 786
|||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 724 CCGAACTATGTTGTGGTTGAACAACGTTGGTATGATCTATTGTTGAATCCCGCTAACGAT 783
Query 787 GATCATCCATCACATGACGTCTCCGAAGGCCAAAAGCTCGTGAAAGAGGTTTACGAGGCC 846
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 784 GATCATCCATCACATGACGTCTCCGAAGGCCAAAAGCTCGTGAAAGAAGTTTACGAGGCC 843
Query 847 TTGAGATCGAGTCCTCAATGGAATGAGATTTTATTCATTATAACGTATGACGAACACGGT 906
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 844 TTGAGATCGAGTCCTCAATGGAATGAGATTTTATTCATTATAACATATGACGAACACGGT 903
Query 907 GGGTTTTACGACCATGTACCTACTCCGGTCGATGGAGTTCCTAATCCGGATGGTATCTTG 966
|| || ||||||||||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct 904 GGATTCTACGACCATGTCCCTACTCCCCTCGACGGAGTTCCTAATCCGGATGGTATCTTG 963
Query 967 GGACCTCCACCGTATAATTTTGAGTTTAACCGGCTTGGCGTTAGGGTTCCGGCCTTCTTC 1026
|||||||||||||| |||||||| ||||||||||| ||||||||||||||| | ||||||
Sbjct 964 GGACCTCCACCGTACAATTTTGAATTTAACCGGCTCGGCGTTAGGGTTCCGACTTTCTTC 1023
Query 1027 ATCTCCCCTTGGATTGAGCCTGGAACAATTATTCATGGGCCAAGTGGGCCGTACCCAATG 1086
||||||||||||||||||||||| ||| || |||||||| ||| ||||||||||| ||||
Sbjct 1024 ATCTCCCCTTGGATTGAGCCTGGCACAGTTCTTCATGGGTCAAATGGGCCGTACCTAATG 1083
Query 1087 TCACAATACGAGCATTCATCAATTCCTGCAACGGTCAAGAAAATTTTCAAACTCAGAA-A 1145
|||||||| |||||||| |||||||| |||||||||||||||||||||||||||| || |
Sbjct 1084 TCACAATATGAGCATTCGTCAATTCCCGCAACGGTCAAGAAAATTTTCAAACTCA-AAGA 1142
Query 1146 CTTCTTGACAAAGAGAGATTCATGGGCTGGCACTTTTGAATCCGTTATTACAAGATATTC 1205
|| ||||||||||||||||| |||||||||||||||||||| |||||||| ||| | ||
Sbjct 1143 TTTTTTGACAAAGAGAGATTCGTGGGCTGGCACTTTTGAATCTGTTATTACGAGAAACTC 1202
Query 1206 ACCAAGACAAGATTGCCCTGAAACTTTATCAAATCCGGTCAAAATGAGAACGACGGTGGC 1265
|||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||
Sbjct 1203 ACCAAGACAAGATTGCCCTGAAACATTGTCAAATCCGGTCAAAATGAGAGGGACGGTGGC 1262
Query 1266 AAAAGAAAATGCAGAATTGAGCGACTTTCAAGAAGAGCTCGTAATAGTTGCTGCAGGATT 1325
||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||
Sbjct 1263 AAAAGAAAATGCAGAATTGAGCGACTTTCAAGAAGAGCTTGTAATAGTTGCTGCGGGTTT 1322
Query 1326 AAAAGGAGACTACAAAAACGAAGAATTGATGCACAAGCTATGCAAAGAAACTTGCGTTGC 1385
|||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||| |
Sbjct 1323 AAAAGGAGACTACAAAAACGAAGAATTGCTATACAAACTATGCAAAAAAACTTGCGTTTC 1382
Query 1386 AGACGCTGCCATATACGTTACGAACGCGTTTGATAAGTTTATAGAAGAGTCTCGAAAGGC 1445
||| ||| | | |||||||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct 1383 AGATGCTTCTAAATACGTTACGAAAGCGTTTGATAAGTTTGTAGAAGAGTCTAAAAAGGC 1442
Query 1446 AAGAGAAAGGGGATGTGATGAGAACGACATCGTTTATTGCATCgatgatgatgatgatca 1505
||||||||||||| ||||||||||||||||||||| |||| | |||||||||||||||||
Sbjct 1443 AAGAGAAAGGGGAGGTGATGAGAACGACATCGTTTTTTGCGTTGATGATGATGATGATCA 1502
Query 1506 tgatgTTGTGAAACCACCACCATCACAAAC-GAAGGCATTACATGTTACTC 1555
| |||||||||||||||||||||||||| | || | ||| ||||| |||||
Sbjct 1503 TAATGTTGTGAAACCACCACCATCACAATCAGA-GCCATCACATGCTACTC 1552
> AT3G03530.1 | Symbols: NPC4 | non-specific phospholipase C4 |
chr3:842499-845043 REVERSE LENGTH=1877
Length=1877
Score = 1753 bits (949), Expect = 0.0
Identities = 1357/1553 (87%), Gaps = 31/1553 (2%)
Strand=Plus/Plus
Query 30 ATCGTATCCGATCAAAACCATCGTCGTTTTAGTCCAAGAGAATCGTTCTTTCGACCACAC 89
|||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct 103 ATCGTATCCGATCAAAACCATCGTCGTTTTGGTTCAAGAAAATCGTTCTTTTGACCACAC 162
Query 90 ACTTGGCTGGTTCAAAGAGCTAAACCGGGAAATTGATGGAGTCGTC-AAATCGGA-CCTG 147
|| |||||||| ||||| |||||||||||||| || || ||| | ||||| || ||
Sbjct 163 CCTAGGCTGGTTTAAAGAACTAAACCGGGAAATCGACGGCGTC-ACGAAATCTGATCC-C 220
Query 148 AAATTCAACCCGGTTTTGTCTTCCGACCA-AAATTCTC-ACAATATCGTCTTCGGTGACC 205
|||| |||| |||||| ||| ||||| || ||| |||| | | | |||||||| || |
Sbjct 221 AAATCCAACACGGTTTCGTCATCCGA-CACAAACTCTCTTC-GTGTAGTCTTCGGGGATC 278
Query 206 AGTCTCAGTACGTTGACCCGAATCCAGGTCACTCCATTCGGGATATTTACGAACAAGTGT 265
|||||||||||||| ||||| |||||||||||||||||| |||||| |||||||||||||
Sbjct 279 AGTCTCAGTACGTTAACCCGGATCCAGGTCACTCCATTCAGGATATCTACGAACAAGTGT 338
Query 266 TTGGTAAGCCATGGGATTC-GGTTCACCCGGATCCAAACCCGGGTCCA-GCTAAAATGTC 323
||||||||||||||||||| || | | |||||||||||||||||| || |||| |||||
Sbjct 339 TTGGTAAGCCATGGGATTCAGG-TAAACCGGATCCAAACCCGGGT-CATCCTAACATGTC 396
Query 324 CGGATTTGCCCAAAACGCCGA-ACGGAAGATGAAAGGGATGTCATCTGCGGTTATGAACG 382
||| ||||| ||||||||||| | | || | |||||||||||| || |||||||||||||
Sbjct 397 CGGTTTTGCTCAAAACGCCGAGA-GAAACAAGAAAGGGATGTCCTCCGCGGTTATGAACG 455
Query 383 GATTTAAACCGGATGCTTTGCCGGTTTACAAGGAATTGGTTCAAAAATTCGCCATATGTG 442
||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 456 GATTTAAACCGAATGCTTTGCCGGTTTACAAGGAGTTGGTTCAAAATTTCGCCATATGTG 515
Query 443 ATAGGTGGTTTGCGTCAGTTCCTG-GTGCAACACAGCCAAACCGATTGTTTGTCCACTCA 501
|||||||||||||||| ||||| | || | || |||||||||||||||| || |||||
Sbjct 516 ATAGGTGGTTTGCGTCGGTTCCAGCGT-CGACGCAGCCAAACCGATTGTACGTACACTCG 574
Query 502 GCAACATCACATGGAACAACGAACAACGAGAGGAAATTACTAATCGAAGGTTTTCCACAA 561
||||||||||||||| |||||| |||||| | |||||| ||| ||||||| ||||||||
Sbjct 575 GCAACATCACATGGAGCAACGAGCAACGACAAGAAATTGCTACTCGAAGGGTTTCCACAG 634
Query 562 AAGACGATATTCGAGTCACTCGATGAAGCCGGTTTTACCTTTGGGATTTATTACCAATGT 621
||||||||||||||||| ||||||||||| ||||||| |||||| ||||| ||||||| |
Sbjct 635 AAGACGATATTCGAGTCTCTCGATGAAGCTGGTTTTAGCTTTGGCATTTACTACCAAT-T 693
Query 622 -TTTCCTACTACTCTCTTTTATAGGAATTTGAGAAAACTCAAGTATTTGACACGTTTCCA 680
|||| | |||||||||||||||||||||||||| || || |||||||||| ||||||
Sbjct 694 CCCTCCTTCCACTCTCTTTTATAGGAATTTGAGAAAGCTGAAATATTTGACACATTTCCA 753
Query 681 CGACTACGGACTACAATTCAAGAAAGATTGTAAAGAAGGGAAGCTACCGAACTACGTTGT 740
| | |||||| ||||||||||||||||||| |||||||| |||||||| |||||||| ||
Sbjct 754 CCAATACGGAATACAATTCAAGAAAGATTGCAAAGAAGGAAAGCTACCCAACTACGTCGT 813
Query 741 GGTTGAACAACGCTGGTATGATCTATTGTCGAA-TCCCGCTAACGACGATCATCCATCAC 799
||| |||||||| |||| |||||||||||| || ||| || || |||||||| || || |
Sbjct 814 GGTCGAACAACGTTGGTTTGATCTATTGTC-AACTCCAGCCAATGACGATCACCCTTCTC 872
Query 800 ATGACGTCTCCGAAGGCCAAAAGCTCGTGAAAGAGGTTTACGAGGCCTTGAGATCGAGTC 859
| || |||||||| || |||||||||||||||||||| |||||||| |||||||||||||
Sbjct 873 ACGATGTCTCCGAGGGTCAAAAGCTCGTGAAAGAGGTCTACGAGGCATTGAGATCGAGTC 932
Query 860 CTCAATGGAATGAGATTTTATTCATTATAACGTATGACGAACACGGTGGGTTTTACGACC 919
|||||||||||||||||||||| || |||||||| ||||| || ||||| ||||||||||
Sbjct 933 CTCAATGGAATGAGATTTTATTTATCATAACGTACGACGAGCATGGTGGATTTTACGACC 992
Query 920 ATGTACCTACTCCGGTCGATGGAGTTCCTAATCCGGATGGTATCTTGGGACCTCCACCGT 979
||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 993 ATGTACCTACTCCAGTCGACGGAGTTCCTAATCCGGATGGTATCTTGGGACCTCCACCAT 1052
Query 980 ATAATTTTGAGTTTAACCGGCTTGGCGTTAGGGTTCCGGCCTTCTTCATCTCCCCTTGGA 1039
|||||||||||||||||||||| || |||||||||||| | ||||||||||| |||||||
Sbjct 1053 ATAATTTTGAGTTTAACCGGCTCGGTGTTAGGGTTCCGACTTTCTTCATCTCTCCTTGGA 1112
Query 1040 TTGAGCCTGGAACAATTATTCATGGGCCAAGTGGGCCGTACCCAATGTCACAATACGAGC 1099
|||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||| ||||
Sbjct 1113 TTGAGCCTGGCACAGTTATTCATGGGCCAAATGGGCCGTACCCAAGGTCACAATATGAGC 1172
Query 1100 ATTCATCAATTCCTGCAACGGTCAAGAAAATTTTCAAACTCAGAA-ACTTCTTGACAAAG 1158
|||| |||||||| ||||||||||||| |||||||||||||| || | |||||| |||||
Sbjct 1173 ATTCGTCAATTCCCGCAACGGTCAAGACAATTTTCAAACTCA-AAGATTTCTTGTCAAAG 1231
Query 1159 AGAGATTCATGGGCTGGCACTTTTGAATCCGTTATTACAAGATATTCACCAAGACAAGAT 1218
||||||||||||||||||||||||||||| |||||||| ||| | |||||||||||||||
Sbjct 1232 AGAGATTCATGGGCTGGCACTTTTGAATCTGTTATTACGAGAGACTCACCAAGACAAGAT 1291
Query 1219 TGCCCTGAAACTTTATCAAATCCGGTCAAAATGAGAACGACGGTGGCAAAAGAAAATGCA 1278
||||||||||| ||||||| |||| | ||| | ||| ||| |||||||||||||||||
Sbjct 1292 TGCCCTGAAACATTATCAACTCCGATTAAACTAAGAGGGACAATGGCAAAAGAAAATGCA 1351
Query 1279 GAATTGAGCGACTTTCAAGAAGAGCTCGTAATAGTTGCTGCAGGATTAAAAGGAGACTAC 1338
|||| ||||| ||||||||||| ||||| ||| | ||||| ||||||||||||||||||
Sbjct 1352 CAATTAAGCGAATTTCAAGAAGATCTCGTTATAATGGCTGCGGGATTAAAAGGAGACTAC 1411
Query 1339 AAAAACGAAGAATTGATGCACAAGCTATGCAAAGAAACTTGCGTTGCAGACGC-TGCCAT 1397
|||||||||||||| || ||||||||||| |||||||||||||||||||| || | |||
Sbjct 1412 AAAAACGAAGAATTAATCCACAAGCTATGTAAAGAAACTTGCGTTGCAGATGCAT-CCAA 1470
Query 1398 ATACGTTACGAACGCGTTTGATAAGTTTATAGAAGAGTCTCGAAAGGCAAGAGAAAGGGG 1457
||||||||| || |||||||| |||||| | |||||||| ||||||||||||| || ||
Sbjct 1471 ATACGTTACAAATGCGTTTGAGAAGTTTCTGGAAGAGTCAAGAAAGGCAAGAGATAGAGG 1530
Query 1458 ATGTGATGAGAACGACATCGTTTATTGCATCgatgatgatgatgatcatgatgTTGTGAA 1517
|||||||||||||||||||||||||||| | ||||||||||||||||||| | | ||||
Sbjct 1531 ATGTGATGAGAACGACATCGTTTATTGCGTTGATGATGATGATGATCATG-T-T-GTGAT 1587
Query 1518 ACCACCACCATCACAAAC-GAAGGCATTACATGTTACT-CATAAACCAAAAAC 1568
|||||||| |||||| | |||| ||| | ||| | || | | ||||||||||
Sbjct 1588 ACCACCACAATCACATTCAGAAG-CATCAAATGCTGCTGC-TCAACCAAAAAC 1638
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77610042570
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5