BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477613
Length=3174
Score E
Sequences producing significant alignments: (Bits) Value
AT3G03680.1 | Symbols: | C2 calcium/lipid-binding plant phosph... 5009 0.0
> AT3G03680.1 | Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein | chr3:907500-910807 FORWARD
LENGTH=3308
Length=3308
Score = 5009 bits (2712), Expect = 0.0
Identities = 3034/3188 (95%), Gaps = 27/3188 (1%)
Strand=Plus/Plus
Query 1 AAAATTCAAACTTTATTtctctctctc--tctTTCAAAAGAAACTGAACAGTCTCATTCA 58
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 8 AAAATTCAAACTTTATTTCTCTCTCTCTATCTTTCAAAAGAAACTGAACAGTCTCATTCA 67
Query 59 TCTTCTTCAATCGCAAGAAAAAATCTGATCAGCTTCAATTTTCTCCGAGACGGAAACAAT 118
||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct 68 TCTTCTTCAATCGTAAG-AAAAATCTGATCAGCTTCAATTATCTCCGAGAAGGAAACAAT 126
Query 119 GGCGGACATTGTTCTGAGGAAGCTGATTGTTGAGATCTGTAGCGCAAGAAATCTGATGCC 178
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 GGCAGACAATGTTCTGAGGAAGCTGATTGTTGAGATCTGTAGCGCAAGAAATCTGATGCC 186
Query 179 TAAGGATGGTCAAGGCACGGCGAGCGCTTACGCAATTGTAGATTTTGACGGCCAACGGCG 238
|||||||||||||||||| ||||||||||||||||| || ||||| ||||||||||||||
Sbjct 187 TAAGGATGGTCAAGGCACCGCGAGCGCTTACGCAATCGTGGATTTCGACGGCCAACGGCG 246
Query 239 ACGGACGAAGACGAAATTCCGAGATCTGAATCCACAATGGGACGAGAAGCTCGAGTTCTT 298
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 247 ACGGACGAAGACGAAATTCCGAGATCTGAATCCACAGTGGGACGAGAAGCTCGAGTTCTT 306
Query 299 CGTCCACGACACGTCGACTATGGGGGAGGAGATTCTTGAGATCAATCTTTGCAACGACAA 358
|| |||||| | ||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 307 TGTGCACGACGTGGCGACTATGGGGGAAGAGATTCTTGAGATCAATCTTTGCAACGATAA 366
Query 359 GAAGACGGGAAAACGGAGCACGTTTCTCGGGAAGGTTAAGATCGCCGGAAGTTCGTTTGC 418
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 367 GAAGACGGGAAAACGGAGCACGTTTCTCGGGAAAGTTAAGATCGCCGGAAGTGCGTTTGC 426
Query 419 GGCGGCTGGATCTGAAACTCTTGTTTACTATCCGCTTGAGAAGAGGAGCGTTTTCTCTCA 478
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 427 GTCGGCTGGATCTGAAACTCTTGTTTATTATCCGCTTGAGAAGAGGAGCGTTTTCTCTCA 486
Query 479 GATCAAAGGTGAGATTGGATTAAAAGCGTACTACGTCGATGAGAAT-------C--CACC 529
|||||||||||||||||||||||| || || ||||||||||||||| | | ||
Sbjct 487 GATCAAAGGTGAGATTGGATTAAAGGCTTATTACGTCGATGAGAATCCCCCGGCGGCGCC 546
Query 530 -G--GCGACGGAGCAGAAACCTGAGGCTGCAGCTGCGACGGTAGAGAAGGCGCCGGAGAA 586
| |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 547 TGCTGCGACGGAGCCGAAACCTGAGGCTGCAGCTGCGACGGAAGAGAAGCCGCCGGAGAT 606
Query 587 TCCaaaagcagaggaggggaagaaagaaacagaggcggcgaaaacagaggagaagaagga 646
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 607 TGCAAAAGCAGAGGATGGGAAGAAAGAAACAGAGGCGGCGAAAACAGAGGAGAAGAAGGA 666
Query 647 aggagataaaaaagaagaggagaaacctaagaaagaagctaaaccagacgagaaaaaaCC 706
||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||
Sbjct 667 AGGAGATAAAAAAGAAGAGGAGAAACCGAAGGAAGAAGCTAAACCGGACGAGAAAAAACC 726
Query 707 CGATGCGGCAGCTCCTGCGCCACCGGATACTAAGGCAAAGACGCCTGATGCCGCCGCAGC 766
|||| ||| ||||||||||| |||||||||| ||||||| |||||| |||
Sbjct 727 CGAT---GCA---------CCACCGGATACGAAGGCAAAGAAGCCTGATACCGCCGTAGC 774
Query 767 TCCTCCTCCTCCTCCGGCTGAGATTAAGAATCCGCCTTTACTGCAGAAGGCAGAGACTGT 826
|||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||
Sbjct 775 TCCTCCTCCTCCTCCGGCTGAGGTTAAGAATCCGCCTATACCGCAGAAGGCAGAGACTGT 834
Query 827 GAAGCAGAATGAATTAGGAATTAAACCGGAGAACGTAAACCGGCAAGATCTAATCGGGTC 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 GAAGCAGAATGAATTAGGAATTAAACCGGAGAACGTAAACCGGCAAGATCTAATCGGGTC 894
Query 887 CGATCTCCAGCTTCCTTCACTAACCAGAGATCAGAACCGTGGTGGTGGCTACGATCTCGT 946
|||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 895 TGATCTCGAGCTTCCTTCACTAACCAGAGATCAGAATCGTGGTGGTGGTTACGATCTCGT 954
Query 947 CGATCGAATGCCGTTTCTATATATCCGTGTTGCTAAAGCGAAGCGAGCAAAGAACGATGG 1006
||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||
Sbjct 955 CGATCGAATGCCGTTTCTATACATTCGTGTAGCTAAAGCGAAGCGAGCGAAGAACGATGG 1014
Query 1007 AAGTAATCCGATTTATGCAAAGCTCGTGATCGGAACAAATGGTGTGAAAACCAGAAGCCA 1066
||| |||||| |||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1015 AAGCAATCCGGTTTACGCGAAGCTCGTGATCGGAACAAATGGCGTGAAAACCAGAAGCCA 1074
Query 1067 AACCGGTAAAGATTGGGATCAAGTGTTTGCTTTCGAGAAAGAGAGCTTAAACTCAAGCTC 1126
||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||
Sbjct 1075 AACCGGTAAAGATTGGGATCAAGTGTTTGCTTTTGAGAAAGAGAGCTTAAACTCGACCTC 1134
Query 1127 ACTTGAAGTTTCCGTTTGGAGTGAAGAGAAGATTGAGAAGGAAGATAAAACGACGACGAC 1186
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1135 GCTTGAAGTTTCCGTTTGGAGTGAAGAGAAGATTGAGAAGGAAGATAAAACAACGACGAC 1194
Query 1187 TACTGAGAGTTGTTTAGGAACGGTGTCGTTTGATCTTCAAGAGGTTCCTAAGAGAGTGCC 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 TACTGAGAGTTGTTTAGGAACGGTGTCGTTTGATCTTCAAGAGGTTCCTAAGAGAGTGCC 1254
Query 1247 TCCGGATAGTCCTTTAGCTCCTCAATGGTACACATTGGAATCTGAGAAATCGCCGGGGAA 1306
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1255 TCCGGATAGTCCTTTGGCTCCTCAATGGTACACATTGGAATCTGAGAAATCACCGGGGAA 1314
Query 1307 TGACGTCATGCTCGCTGTTTGGCTCGGAACTCAAGCTGATGAAGCGTTTCAAGAAGCTTG 1366
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1315 TGACGTCATGCTCGCTGTTTGGCTCGGGACTCAAGCTGATGAAGCGTTTCAAGAAGCTTG 1374
Query 1367 GCAATCTGATTCTGGTGGATTGATTCCGGAGACGAGATCCAAAGTTTACTTATCTCCGAA 1426
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 GCAATCTGATTCCGGTGGGTTGATTCCGGAGACGAGATCCAAAGTTTACTTATCTCCGAA 1434
Query 1427 GCTTTGGTATTTGCGTCTAACGGTAATACAAACCCAAGATTTGCAGCTAGGTTTGGGATC 1486
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1435 GCTTTGGTATTTGCGTCTAACGGTCATACAAACCCAAGATTTGCAGCTAGGTTTGGGATC 1494
Query 1487 CGAAGCTAAGTCAAAGATCCCCACCACTGAGCTTTATGTGAAAGCTCAGCTTGGACCTCA 1546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495 CGAAGCTAAGTCAAAGATCCCCACCACTGAGCTTTATGTGAAAGCTCAGCTTGGACCTCA 1554
Query 1547 AGTCTTCAAAACGGCTAGGACTTCGATTGGGCCGTCGACTTCTTCGTCAGGATCAGGTAA 1606
||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||
Sbjct 1555 AGTTTTCAAAACGGCTAGGACTTCGATTGGGCCGTCGGCTTCTTCGTCCGGATCCGGTAA 1614
Query 1607 CCCGACTTGGAATGAGGATCTTGTTTTTGTAGCTTCCGAGCCGTTTGAGCCGTTCTTGAT 1666
|||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1615 CCCGACTTGGAACGAGGATCTAGTTTTCGTAGCTTCCGAGCCGTTTGAGCCGTTCTTGAT 1674
Query 1667 AGTGACTGTGGAAGATATAACAAACGGGCAATCAATTGGTCAGACCAAGATACATATGGG 1726
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1675 AGTGACTGTGGAAGATATAACCAACGGGCAATCAATTGGTCAGACTAAGATACATATGGG 1734
Query 1727 AAGTGTGGAGAGGAGAAATGATGACCGGACTGAACCGAAATCGAGGTGGTTTAATCTCGT 1786
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1735 AAGTGTTGAGAGGAGAAATGATGACCGGACTGAACCGAAATCGAGGTGGTTTAATCTCGC 1794
Query 1787 CGGCGATGAGAATAAACCGTACTCAGGGAGAATCCACGTGAAAGTTTGTCTTGAAGGTGG 1846
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1795 CGGCGATGAGAAGAAACCGTACTCCGGGAGAATCCACGTGAAAGTTTGTCTTGAAGGTGG 1854
Query 1847 GTATCACGTGCTAGACGAAGCAGCTCACGTGACCAGCGATGTCAGACCCTCGGCTAAACA 1906
||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct 1855 GTATCACGTGCTAGACGAAGCAGCTCACGTGACGAGTGATGTCAGACCCTCTGCTAAACA 1914
Query 1907 GTTAGCCAAGCCACCTATTGGTTTATTGGAAGTGGGTATCCGTGGAGCTACTAATTTACT 1966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1915 GTTAGCCAAGCCACCTATTGGTTTATTGGAAGTGGGTATCCGTGGAGCTACTAATTTACT 1974
Query 1967 TCCGGTGAAAACTAGAGATGGTACACGAGGCACCACCGATGCATACGTGGTTGCTAAATA 2026
||| |||||||| ||||| |||||||| |||||||||||||| || ||||||||||||||
Sbjct 1975 TCCTGTGAAAACCAGAGACGGTACACGTGGCACCACCGATGCTTATGTGGTTGCTAAATA 2034
Query 2027 TGGACCGAAATGGATTCGGACCCGTACGATCCTAGACCGGTTTAATCCGCGGTGGAACGA 2086
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 2035 TGGACCGAAATGGATTCGGACTCGTACGATCCTAGACAGGTTTAATCCGCGGTGGAACGA 2094
Query 2087 GCAGTATACATGGGATGTTTATGATCCGTGCACGGTCCTTACGATTGGAGTTTTCGACAA 2146
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2095 GCAGTACACATGGGATGTTTATGATCCGTGCACGGTCCTTACTATTGGAGTTTTCGACAA 2154
Query 2147 CGGACGGTACAAGCGGGACGAATCCGGGAAGCAAGGGAGAGACGTAAGGGTCGGGAAAAT 2206
||| | ||||| |||||||||||||| |||||||||||||| || ||||||||||||||
Sbjct 2155 TGGAAGATACAAACGGGACGAATCCGGAAAGCAAGGGAGAGATGTTAGGGTCGGGAAAAT 2214
Query 2207 CCGTGTACGCCTCTCGACTCTCGACATGAACCGAATCTACCTAAATTCCTACACCATAAC 2266
||||||||| |||||||| |||||||||||||| || ||||| |||||||||||| ||||
Sbjct 2215 CCGTGTACGTCTCTCGACACTCGACATGAACCGCATATACCTTAATTCCTACACCTTAAC 2274
Query 2267 CGTGATCTTACCAAGCGGAGCCAAGAAAATGGGAGAAGTTGAAATTGCGGTTCGATTCTC 2326
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2275 CGTGATCTTACCAAGCGGAGCCAAGAAAATGGGAGAAGTTGAAATCGCGGTTCGATTCTC 2334
Query 2327 TTGTCCATCTTGGCTAAGCATTATTCAAGCCTATGTCACACCAATGCTACCTAGGATGCA 2386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2335 TTGTCCATCTTGGCTAAGCATTATTCAAGCCTATGTCACACCAATGCTACCTAGGATGCA 2394
Query 2387 CTACGTCCGTCCGCTTGGTCCAGCTCAACAAGATATTTTGCGTCACACGGCTATGCGTAT 2446
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2395 CTATGTCCGTCCGCTTGGTCCAGCTCAACAAGACATTTTGCGTCACACGGCTATGCGTAT 2454
Query 2447 TGTGACAGCCCGGCTTGCGCGGTCTGAGCCTCCATTAGGTCAAGAGGTGGTTCAATACAT 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2455 CGTGACAGCCCGGCTTGCGCGGTCTGAGCCTCCATTAGGTCAAGAGGTGGTTCAGTACAT 2514
Query 2507 GCTAGACACGGACAATCATGTGTGGAGCATGAGGAGAAGCAAAGCTAATTGGTTCCGTGT 2566
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2515 GCTAGACACAGACAATCATGTGTGGAGCATGAGGAGAAGCAAAGCTAATTGGTTCCGTGT 2574
Query 2567 TATCACGTTCTTGTCACGTGCCGCTACTATAGCCCGTTGGGTTCACGGAATTCGAACTTG 2626
||||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||
Sbjct 2575 CATCACGTTCTTGTCACGGGCCGCAACTATAGCCCGTTGGATTCACGGGATTCGAACTTG 2634
Query 2627 GGTTCACCCACCAACAACCGTTCTAGTTCACTTGCTTCTCGTGGCCATCGTCTTGTGTCC 2686
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2635 GGTTCACCCACCAACAACCGTTCTCGTTCACTTGCTTCTCGTGGCCATCGTCTTGTGTCC 2694
Query 2687 ACATTTAGTCCTCCCAACCGTTTTCATGTACGCGTTCTTGATCTTAGCCTTAAGATTCCG 2746
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 2695 ACATTTAGTCCTCCCAACCGTATTCATGTACGCGTTCTTGATCTTAGCCTTACGATTCCG 2754
Query 2747 TTCCCGTGGCAGAGTCAAAGTCAACAGCGTTGACCCACGACTATCTTGCGTTGACTCCGT 2806
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2755 TTACCGTGGCAGAGTCAAAGTCAACAGCGTTGACCCACGACTATCTTGCGTTGACTCCGT 2814
Query 2807 TGCTCCCGACGAGCTTGATGAAGAGTTTGATGGTTTCCCAACAACGAGACCACCGGAGGT 2866
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2815 TGCTCCCGACGAGCTTGATGAAGAGTTTGATGGTTTCCCAACAACGAGACAACCGGAGGT 2874
Query 2867 CGTTCGTATAAGGTATGACCGGTTAAGGGCATTGGCCGGTCGGGCACAGACTTTATTAGG 2926
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2875 CGTACGTATAAGGTATGACCGGTTAAGGGCATTGGCCGGTCGGGCACAGACTTTATTAGG 2934
Query 2927 TGACGTGGCGGCTCAAGGGGAGCGTGTTGAGGCGTTGTTCAACTGGAGAGACCCACGCGC 2986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2935 TGACGTGGCGGCTCAAGGGGAGCGTGTTGAGGCGTTGTTCAACTGGAGAGACCCACGCGC 2994
Query 2987 CACGTGTATATTCGTGGTGTTCTGTCttttcgcgtcgtttttgttctacatcgttccgtt 3046
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2995 CACGTGTATATTCGTAGTGTTCTGTCTTTTCGCGTCGTTTTTGTTCTACATCGTTCCGTT 3054
Query 3047 taaagttttcgttttggggtcaggtttttACTACATTCGACATCCGAGGTTTAGAGACGA 3106
|||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 3055 TAAAGTTTTCCTTTTGGGATCTGGTTTTTACTACATTCGACATCCGAGGTTTAGAGACGA 3114
Query 3107 TATGCCTTCCGTTCCGGTCAACTTTTTCCGGCGACTTCCTTCAATGTCAGATCAGATTCT 3166
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3115 TATGCCTTCCGTTCCGGTCAACTTTTTCCGGCGACTTCCTTCAATGTCGGACCAGATTCT 3174
Query 3167 GTGATTCG 3174
||||||||
Sbjct 3175 GTGATTCG 3182
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 157875369621
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5