BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477623 Length=1593 Score E Sequences producing significant alignments: (Bits) Value AT3G03750.2 | Symbols: SUVR3, SDG20 | SET domain protein 20 | c... 1881 0.0 > AT3G03750.2 | Symbols: SUVR3, SDG20 | SET domain protein 20 | chr3:939952-942094 FORWARD LENGTH=1672 Length=1672 Score = 1881 bits (1018), Expect = 0.0 Identities = 1458/1656 (88%), Gaps = 88/1656 (5%) Strand=Plus/Plus Query 6 GCGAGAGT---CACCACCGAAGAAGCGTTCTCTCGGAGAAGCTTCCGACATTATTCTGGC 62 |||||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||| Sbjct 36 GCGAGAGTCACCACCACCGAAGACGCGTTGTCTTGGAGAAGCTTCCGACATTATTCCGGC 95 Query 63 CACCAAACTATTTTTCCGATGTGCGAACTTAATTATTCCATGCCTAAACCCTCAAGAACT 122 | || | | |||| ||||||||||||| || ||| | ||||| |||||||||| |||||| Sbjct 96 CGCCGATCGATTTCTCCGATGTGCGAATTTGATTCTCCCATGGCTAAACCCTCGAGAACT 155 Query 123 CGCCGTTGTCGCTCAAACCTGCAAAACCTTATCCCTAATTTCCAAATCTATAACCTTTCA 182 ||||||||| ||||||||||||||||||||||||||||| || |||||| ||||| |||| Sbjct 156 CGCCGTTGTTGCTCAAACCTGCAAAACCTTATCCCTAATCTCGAAATCTCTAACCATTCA 215 Query 183 CCGATCCCTTGACGCTGCACGATCCTTGGAAAACCTCTCAATCCCGTTTCACAACTCCAT 242 |||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 216 CCGATCTCTCGACGCTGCACGATCCTTGGAAAACATCTCAATCCCGTTTCACAACTCCAT 275 Query 243 CGATTCTCAACGATACGCTTACTTCATCTACACACCATTTCAGATTCCCGCGTCA--T-C 299 |||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||| | | Sbjct 276 CGATTCTCAACGATACGCGTACTTCATCTACACACCTTTTCAGATCCCCGCTTCATCTCC 335 Query 300 TCCTCCGCCGCGACAATGGTGGGGA---GCTGCTACTGAATGTGGATCCGAGTCGAGACC 356 ||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||| Sbjct 336 TCCTCCGCCGCGACAATGGTGGGGAGCTGCTGCTAATGAATGTGGATCGGAGTCTAGACC 395 Query 357 TTGTTTTGACTCAGTGAGTGAACGCGGACGTTTTGGGGTGAGTCTAGTGGACGAGTCAGG 416 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 396 TTGTTTTGACTCAGTGAGTGAAAGCGGACGTTTTGGGGTGAGTTTAGTGGACGAGTCAGG 455 Query 417 ATGCGAATGCGAGAGGTGTGAGGAAGGATACTGCAAGTGTTTAGCTTTCGTTGGGATGGA 476 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 456 ATGCGAATGCGAGAGGTGTGAGGAAGGATACTGCAAGTGTTTAGCTTTCGCGGGGATGGA 515 Query 477 GGAGATTGGTAATGAATGCGGGTCGGGTTGTGGATGCGGGTCGGATTGTTCGAACCGGGT 536 ||||| | ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 516 AGAGATAGCTAACGAATGTGGGTCGGGTTGTGGATGCGGGTCCGATTGTTCGAACCGGGT 575 Query 537 TACACAAAAGGGGATTTCGGTTAGTTTGAAGATTGTAAGAGATGAGAAGAAAGGTTGGTG 596 ||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 576 TACGCAGAAGGGGGTTTCGGTTAGTTTGAAGATTGTGAGAGATGAGAAGAAAGGTTGGTG 635 Query 597 CTTGTACGCTGATCAGCTTATCAAGCAAGGCCAATTCATCTGTGAATATGCAGGTGAGCT 656 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 636 CTTGTACGCTGACCAGCTTATCAAGCAAGGCCAATTCATCTGTGAATATGCAGGTGAGCT 695 Query 657 ATTGACAACTGATGAAGCACATAGACGTCAAAACATTTACGACAAACTGAGATCAACACA 716 ||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 696 ATTGACAACAGATGAAGCACGTAGACGTCAAAACATTTACGACAAACTCAGATCAACACA 755 Query 717 ATCTTTCGCGTCGGCTCTTTTGGTCATACGCGAACACCTCCCTTCAGGACAAGCTTGTTT 776 ||| ||||| || |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 756 ATCCTTCGCTTCAGCTCTTTTGGTCGTACGCGAACACCTCCCTTCAGGACAAGCTTGTTT 815 Query 777 AAGGATAAACATCGATGCCACAAGAATTGGGAACGTTGCTAGATTCATCAACCATTCTTG 836 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 816 AAGGATAAACATCGACGCCACAAGAATTGGGAACGTTGCTAGATTCATCAACCATTCTTG 875 Query 837 TGACGGCGGAAATCTCTCCACCGTTCTGTTGAGAAGCTCAGGAGCATTGCTTCCTAGGCT 896 |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||| Sbjct 876 TGACGGTGGAAATCTCTCCACTGTTCTGTTGAGAAGCTCAGGAGCGTTGCTTCCTCGGCT 935 Query 897 CTGTTTCTTTGCAGCAAGGGACATAATTGCAGAGGAGGAGTTAAGTTTCAGTTATGGAGA 956 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 936 CTGTTTCTTTGCAGCAAAGGACATAATCGCAGAGGAGGAGTTAAGTTTCAGTTATGGAGA 995 Query 957 CGTCCGTGTCACCGGAGAGAACAGAGACAACAAGTTAAATTGCTGTTGTGGTAGTTCCTA 1016 ||| |||| ||||||||||||||||| ||||| |||| |||| |||||||||||||| Sbjct 996 CGTAAGTGTGGCCGGAGAGAACAGAGACGACAAGCTAAACTGCTCTTGTGGTAGTTCCTG 1055 Query 1017 CTGTTTTGGAACGTTGCCTTGTGAGAATACCTGATTTCATCATCAGTTCATCACCTTGTC 1076 |||||| ||||||||||||||||||||||||||| |||||||||| | | | | ||| Sbjct 1056 CTGTTTGGGAACGTTGCCTTGTGAGAATACCTGAATTCATCATCA-T-C-T----T-GTC 1107 Query 1077 TATCTATACTAATGTCCAAAACACTCTTATTATGTGAAAATTTTGAGCTT-TATGTTTCT 1135 | |||||||||||||||| |||||||||||| |||||| || ||| || ||||||| | Sbjct 1108 TCGCTATACTAATGTCCAA--CACTCTTATTATTTGAAAAATTCGAG-TTCTATGTTTGT 1164 Query 1136 AGCAAATACAGCCAAGCACCGTCATTGTCATTCGGTAGTTACACTCTTTTTTAAAAAATA 1195 |||||| ||| |||||||||||||||||||||||| ||||||||| || || | || || Sbjct 1165 AGCAAACACAACCAAGCACCGTCATTGTCATTCGGAAGTTACACT-TTCTT-ATTAA-TA 1221 Query 1196 GCGATTCTACTGATGTGGAGAAAGAAAGGGAGAAATTTAGAA-T--T-CACGAAAATCAA 1251 ||| ||||||||| ||||||| ||| ||| ||||||||||| | | ||||||||| || Sbjct 1222 GCGGCTCTACTGATTTGGAGAAGGAATGGGGGAAATTTAGAAGTAATTCACGAAAATGAA 1281 Query 1252 GTCAT-aaaat-ac-tc-t-aaat--t-----tt--gtgaaaaaaaagtatttttgaaaa 1297 || ||||| | || | |||| | || |||||| |||| || ||||||||| Sbjct 1282 CCCACCAAAATGAAGTCATGAAATACTAAGAATTTCGTGAAATAAAACTAATTTTGAAAA 1341 Query 1298 tgacaaaagtaagaaaaaaagaaaagGGAGGA--A-TGTTGTGAAGATAAGGAGCACGAC 1354 || |||| ||| | ||||| |||||||||||| | ||||||||||| |||||||||||| Sbjct 1342 TGGCAAA-GTACGGAAAAA-GAAAAGGGAGGATTAATGTTGTGAAGAAAAGGAGCACGAC 1399 Query 1355 AGACATGAAGGTTGGTTAGATTAC-AAAGAACTCCACACGAAACGGTCAACACGATTCTC 1413 ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 1400 AGACATGAAGGTTGGTTAGCTTACTAAAGAACTCCACACGAAACGGTCAACACGATTCTC 1459 Query 1414 GTGCCTCTCCTCTCTCAGACA-TCT-A--T-----C---C------AG--A--CGAAATT 1451 ||||||||||||||||||||| ||| | | | | | | ||||||| Sbjct 1460 GTGCCTCTCCTCTCTCAGACACTCTCACATATATACTTACTTCTCTATCCATACGAAATT 1519 Query 1452 ACG-A--A-TACGATACATAG-TTG----A--T-GCTA--CTATACAAGGTGTTATTAAT 1497 ||| | | |||||||| ||| ||| | | |||| |||||||| |||||||||| Sbjct 1520 ACGTACGAATACGATACTTAGATTGTGGTAGCTAGCTATACTATACAATTTGTTATTAAT 1579 Query 1498 CATTGTATCGTACATGATTTGTTTAACCTTTTGAGACAACTAACTTTGGTCTGATTTATC 1557 ||||||||||||||| || |||| |||||||||||||| ||||||| |||||||||||| Sbjct 1580 CATTGTATCGTACAT--TT-GTTTTACCTTTTGAGACAATTAACTTTCGTCTGATTTATC 1636 Query 1558 TTCCtttttttCCTTGAGATAAAGAACATTAATGTG 1593 |||||||||| |||| |||||||||||||| ||||| Sbjct 1637 TTCCTTTTTT-CCTTAAGATAAAGAACATTCATGTG 1671 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78664254015 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5