BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477631
Length=3895
Score E
Sequences producing significant alignments: (Bits) Value
AT3G03790.3 | Symbols: | ankyrin repeat family protein / regul... 5144 0.0
> AT3G03790.3 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein | chr3:961997-968149
FORWARD LENGTH=3932
Length=3932
Score = 5144 bits (2785), Expect = 0.0
Identities = 3113/3272 (95%), Gaps = 20/3272 (1%)
Strand=Plus/Plus
Query 331 AACAAGGTTTTAGTGGGAATTCTTGCCGTCTGGAAATATGGAATTGTCAGTCTCTCCTCA 390
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 458 AACAAGGTTTTAGTGGGAATTCTTACCGTCTAGAAATATGGAATTGTCAGTCTCTCCTCA 517
Query 391 AACCCAAAAGATGAACCTGCAAACTCCTCGCAAAAGCTCACTTTCAGGATCTAGGAAAGA 450
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 518 AACCCAAAAGATGAACCTGCAAACTCCTCGTAAAAGCTCACTTTCAGGATCTAGGAAAGA 577
Query 451 TTTGTGGTTTGCTATACGGGAAGGGTCATTGGTTGATGTGGATTCAGCACTGAGCATACT 510
|||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct 578 TTTGTGGTTTGCTATACGGGAAGGTTCGTTGGTTGATGTGGATTCAGCACTTAGCATACT 637
Query 511 GAAGAAGAATGGTGGCAATATAAATTTAAGGAATGTCC-ATGGTCTGACTCCTCTGCATA 569
||||||| |||||||||||||||||||||||||| || ||||||| |||||||||||||
Sbjct 638 CAAGAAGACTGGTGGCAATATAAATTTAAGGAATG-CCTATGGTCTCACTCCTCTGCATA 696
Query 570 TTGCTGTATGGAGAAATCACATTCCTATTGTTAGGAGACTGCTTGCAGCTGGCGCCGATC 629
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 697 TTGCTGTATGGAGAAATCACATTCCTATTGTTAGGAGACTGCTTGCTGCTGGCGCTGATC 756
Query 630 CAGATGCTAGGGATGGAGAATCTGGGTGGAGTAGTCTTCACCGAGCTTTGCATTTTGGCC 689
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 757 CAGATGCTAGGGATGGAGAATCTGGTTGGAGTAGTCTTCACCGAGCTTTGCATTTTGGCC 816
Query 690 ATCTCGCGGTAGCTAGCGTACTAATTGACTCAGGTGCTTCTTTTACTCTAGAAGACATAA 749
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 817 ATCTCGCGGTAGCTAGCGTATTGATTGACTCAGGTGCTTCTTTTACTCTAGAAGACATAA 876
Query 750 AACTGCGAACACCGGTTGATTTGGTCTCAGGTCCAGTGGCTCAGGTTATTGGCGAGCAAC 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 877 AACTGCGAACACCGGTTGATTTGGTCTCAGGTCCAGTGGCTCAGGTTATTGGCGAGCAAC 936
Query 810 AGAGTTCGGTCGCTACAGAGGTTTTCAGCTGGGGAAATGGTGCAAACTACCAACTTGGAA 869
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 937 AAAGTTCGGTGGCTACAGAGGTTTTCAGCTGGGGAAATGGTGCAAACTACCAACTTGGAA 996
Query 870 CTGGCAATCAACATGTTCAGAAGGTACCCGGCAGAGTTGATTCACTGCATGGTTGTTTTA 929
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 997 CTGGCAATCAACATGTTCAGAAGGTACCAGGGAGAGTTGATTCACTGCATGGTTGTTTTA 1056
Query 930 TTAAGTTGGTCTCTGCTGCAAAGTTCCATAGTGTTGCCATTAGTTCTCATGGAGAAGTCT 989
||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 1057 TTAAGTTGGTCTCCGCTGCAAAGTTTCATAGTGTTGCCATTAGTACTCATGGAGAAGTCT 1116
Query 990 ACACGTGGGGATTTGGAAGGGGTGGCCGCCTTGGACATCCTGAATTTGACATTCACAGTG 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1117 ACACGTGGGGATTTGGAAGGGGTGGCCGCCTTGGACATCCTGAATTTGACATTCATAGTG 1176
Query 1050 GTCAAGCTGCTGTTATTACTCCCCGCCAGGTGATATCTGGTTTAGGATCTCGCCGTGTAA 1109
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 GTCAAGCTGCAGTGATTACTCCCCGCCAGGTGATATCTGGTTTAGGATCTCGCCGTGTAA 1236
Query 1110 AGGCAGTTGCGGCAGCTAAGCACCACACTGTTATTGCTACGGAAGGCGGGGATGTATACA 1169
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 1237 AAGCAGTTGCGGCAGCTAAGCACCACACTGTTATTGCTACAGAAGGCGGGGATGTGTACA 1296
Query 1170 CATGGGGTTCCAATAGAGAGGGTCAGCTTGGTTATACCTCCGTGGATACTCAGGCAACTC 1229
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1297 CATGGGGTTCCAATAGAGAGGGTCAGCTTGGTTATACCTCTGTGGATACTCAGGCAACAC 1356
Query 1230 CCCGAAAAGTGACTTCATTGAAGGCGAAGATTGTAGCTGTTTCTGCAGCAAACAAACATA 1289
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1357 CCCGCAAAGTGACTTCATTGAAGGCGAAGATTGTAGCTGTTTCTGCAGCAAACAAACACA 1416
Query 1290 CCGCCGTAGTTTCTGAGTGCGGTGAAGTTTTCACTTGGGGATGCAACAAGGAAGGTCAGC 1349
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1417 CCGCCGTAGTTTCTGACTGCGGTGAAGTTTTCACTTGGGGATGCAACAAGGAAGGTCAGC 1476
Query 1350 TTGGTTATGGAACCTCCAACTCAGCATCAAACTATTCTCCCAGATTGGTTGATTACTTGA 1409
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1477 TTGGTTATGGAACCTCCAACTCAGCATCAAACTACTCTCCCAGATTGGTTGATTACTTGA 1536
Query 1410 AAGGAAAAGTTTTCACGGCTATTGCATCTTCAAAATATCACACTCTAGTGTTGCGAAACG 1469
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 1537 AAGGAAAAGTGTTCACGGCTATTGCATCTTCAAAATATCACACTCTAGTGCTGCGAAATG 1596
Query 1470 ATGGAGAGGTGTACACCTGGGGTCATCGGCTGGTGACTCCAAGACGTATTATCATTTCCC 1529
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1597 ATGGAGAGGTGTACACCTGGGGTCATCGGCTGGTGACTCCAAGACGTGTTATCATTTCCC 1656
Query 1530 GGAATTTAAAGAAAGCTGGGAACACACTATTGAATTTTCATCGAAGGAGACCTCTTCGAT 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 GGAATTTAAAGAAAGCTGGGAACACACTATTGAATTTTCATCGAAGGAGACCTCTTCGAT 1716
Query 1590 TGACTGCAATAGCTGCGGGAATGGTACACAGTTTGGCTCTAGCAGAAGATGGTGCATTGT 1649
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1717 TGACTGCAATAGCTGCGGGAATGGTACACAGCTTGGCTCTAGCAGAAGATGGTGCATTCT 1776
Query 1650 TTTATTGGGTTTCCTCTGACTCCAATCTTAGATGCCAACAGTTGCATTCGCTTCACGGTA 1709
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1777 TTTATTGGGTTTCCTCTGACTCCAATCTTAGATGCCAACAGTTGCATTCGCTGCACGGTA 1836
Query 1710 AAACAGTAGTGAGCATTTCAGCGGGTAAATACTGGGCATCTGCTGTTACTAGTACAGGTG 1769
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1837 AAACAGTTGTGAGCATTTCAGCGGGTAAATACTGGGCATCTGCTGTTACTAGTACAGGTG 1896
Query 1770 AAGTTTACATGTGGGATGGGAAGGATGGTAAAGATAT-GCCACCGTCTCTTTCTCGCCTC 1828
||||||||||||||||||||||| ||||||||||||| || ||| |||||||||||||||
Sbjct 1897 AAGTTTACATGTGGGATGGGAAGAATGGTAAAGATATTGC-ACCATCTCTTTCTCGCCTC 1955
Query 1829 CACAACTTGAAAAGGGGAACCACAGTTGCTGTTGGCGAAACACATCTTCTGGTTGTGGGT 1888
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1956 CACAACTTGAAAAGGGCAACCACAGTTGCTGTTGGCGAAACTCATCTTCTGGTTGTTGGT 2015
Query 1889 TCTCTGTATCATCCTGCCTATGCTCCTACTGTGCTTAAGAAGTCTCAGACTGTGCAAGCG 1948
||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||
Sbjct 2016 TCTCTGTATCATCCTGCATATGCTCCTATTGTGCTTAAGAAGTCTCAGACACTGCAAGCT 2075
Query 1949 GATGAAA-GTAGGGAAGAAGAAAATGAAGAACTGGATGAGGGTTTTATGTTTGATGATGT 2007
||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2076 GAT-AAATGTAGGGAAGAAGAAAATGAAGAACTGGATGAGGGTTTTATGTTTGACGATGT 2134
Query 2008 GGAATCTGTGAATGTATTACAATCCGTGCAACACGATAATCCAAAGGAGAGGACAGTACC 2067
|||||| ||||| || || |||||||||||| |||||||||| |||||||||| ||| ||
Sbjct 2135 GGAATCCGTGAACGTGTTGCAATCCGTGCAATACGATAATCCTAAGGAGAGGATAGTGCC 2194
Query 2068 CAGCTTAAAAAGTTTATGCGAGAAGGTGGCAGCGGAGTGTATTGTAGAGCCACGAAATGC 2127
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2195 TAGCTTGAAAAGTTTATGCGAGAAGGTGGCCGCGGAGTGTATTGTAGAGCCACGAAATGC 2254
Query 2128 TATTCAACTGCTTGAAATTGCGGATTCGCTTGGAGCAGAGGACCTCAAGAAGTACTGTGA 2187
||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 2255 TATTCAATTGCTTGAAATTGCGGATTCGCTTGGAGCAGAGGATCTTAAGAAGTACTGTGA 2314
Query 2188 GGACATTGTGATCCGAAACCTTGACTTTATTTTGACGGTTTCTCCCCAATCAATTGCAAA 2247
|||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 2315 GGACATTGTGATTCGAAACCTTGACTTTATTTTGACATTTTCTCCCCAATCTATTGCAAA 2374
Query 2248 TACATCACCTGATGTTCTTGCCAATCTTGAGAAATTACTGGATGACAGATCATCTGAAGC 2307
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2375 TACATCACCTGATGTTCTTGCCAATCTTGAGAAATTACTGGATGACAGATCATCTGAAAC 2434
Query 2308 ATGGAGCTCCCGACCACTTCCAACACCAACAGCCACATTTCCAGTTGTGATAGATAGTGA 2367
|||||||||||||||||||||||| ||||||||||||||||| ||||| || || |||||
Sbjct 2435 ATGGAGCTCCCGACCACTTCCAACCCCAACAGCCACATTTCCTGTTGTTATTGACAGTGA 2494
Query 2368 AGAGGAGGAAAGTGAGAGCGACATTCTAAGAACTCGTGACAACCATGTGAAACCCTTTTC 2427
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 2495 AGAGGAGGAAAGTGAGAGCGACATTCTAAGAACTCGTGACAGCCATGTGAAACACTTTTC 2554
Query 2428 CAGTATTGCTGACGGAAGTACTCGAATGGATTCATTCTTGCAACCAGAAGATGAGCTCAC 2487
|||||||| || | ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2555 CAGTATTGGTG--G----TACTCGAATGGATTCATTCTTGCAACCAGAAGATGAGCTGAC 2608
Query 2488 TTTACGCAATTCCAAAGAAGTCCGAGCTTTGAGGAAAAAGTTGCAACAAATTGAGATCCT 2547
| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2609 TCAACACAATTCCAAAGAAGTCCGAGCTTTGAGGAAAAAGTTGCAACAAATTGAGATACT 2668
Query 2548 TGAAGCAAAACAATCCAGAGGACAACATCTTGATGGTCAGCAAATAGCAAAACTTCAAAA 2607
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2669 TGAAGCAAAACAATCGAGAGGACAACTTCTTGATGGTCAGCAAATAGCAAAACTTCAAAA 2728
Query 2608 GAAACTAGATATCGAAAGTTCACTGGTAGAACTTGGTATTCCTTTTGAAGAGTCTCCAGA 2667
||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||
Sbjct 2729 GAAACTAGATATCGAAAGTTCACTGGTAGAACTTGGTATTCCTGTGGAAGAGTTTCCAGA 2788
Query 2668 GGCAAAATCATCAACAGCTTTACCACTAGATGGAAAAGCCAACAAGAATGGAAAAAAGAA 2727
||||||| || ||||||||||||| ||||| ||||| ||||||||||| |||||||||||
Sbjct 2789 GGCAAAAGCAACAACAGCTTTACCGCTAGAAGGAAAGGCCAACAAGAAGGGAAAAAAGAA 2848
Query 2728 GAGAAAGGGGAAACAGAGATTTTTACAGGTTGAGACATACCCTGATTTTGGTGAAGTTAA 2787
|| |||||| || ||||||||| |||| |||||||||| |||||| ||||||||||||||
Sbjct 2849 GAAAAAGGGTAATCAGAGATTTGTACAAGTTGAGACATTCCCTGAATTTGGTGAAGTTAA 2908
Query 2788 AGTGGAAATAGATACAATGCAGGATAAAGAAATTGAGGAAATTTCTGAAGCTATCAAGCC 2847
||||||||||||||| ||||| || ||||||||||| ||||| | |||||||||||||||
Sbjct 2909 AGTGGAAATAGATACGATGCAAGACAAAGAAATTGAAGAAATCTGTGAAGCTATCAAGCC 2968
Query 2848 AAAGGATGGCAAAACCATGCTGGATATGACGATGATTAGTGGGTTCCCCAAAGAATCAGA 2907
||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 2969 AAAGGGTGGCAAAACCATGTTGGATACGACGATGATTAGTGGGTTCCCCAAAGAATCAGA 3028
Query 2908 CTTTGTCTCACTCTCGCAGAAGAAAGATAATCCACCCAATTCGCCGAGAAGCAAGAAACT 2967
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 3029 CTTTGTCTCACTCTCGCAAAAGAAAGATAATCCACCCGATTCGCCGAGAAGCAAGAAACT 3088
Query 2968 TGCAACGGCAGCTAACAAGAAGAAGAACAGAAAGGGTGGGCTTTCCATGTTCTTGACTGG 3027
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3089 TGCAACGGCAGCAAACAAGAAGAAGAACAGAAAGGGTGGGCTTTCCATGTTCTTGACTGG 3148
Query 3028 TGCTCTTGATGATATTCCTAAACCTGTTGTTGCTCCTCCACCAAAACCTAAGATTGAAGG 3087
||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3149 TGCTCTTGATGATGTCCCTAAACCTGTTGTTGCTCCTCCACCAAGGCCTAAGATTGAAGG 3208
Query 3088 TCCTGTGTGGGGTGGAGCTAAGGTTTCTAAAGGATTATCTTCCCTCCGGGATATTCAAGA 3147
||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||
Sbjct 3209 TCCTGTGTGGGGTGGGGCTAAGATTTCTAAAGGATTATCTTCCCTGCGGGATATTCAAGA 3268
Query 3148 TGAACAAAGCAAGACCCAGC-CTCATGAACCTGTTAGGACTACTAG------GTCAGGCG 3200
||||||||||||||||| || |||||||||||||||||||||||| |||||| |
Sbjct 3269 TGAACAAAGCAAGACCC-GCTCTCATGAACCTGTTAGGACTACTAAAAATCAGTCAGGGG 3327
Query 3201 ATGATTCTTCTGGTAAAACTGAAGGCAAGATATTACTTAGTTCCTTCTTGACATCGAAGC 3260
|||||||| ||||||||| |||||| ||||||||||| |||||||||||||| |||||||
Sbjct 3328 ATGATTCTCCTGGTAAAAGTGAAGGAAAGATATTACTGAGTTCCTTCTTGACTTCGAAGC 3387
Query 3261 CGATTCCAATGGAACCAGCCAAAAGTTTGCAGCAGTCTGATGTGGAAAAAGGAACTCCTC 3320
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3388 CGATTCCGATGGAACCAGCCAAAAGTTTGCAGCAATCTGATGTGGAAAAAGGAACTCCTC 3447
Query 3321 CTTGGGCTTCCTCTGAAACTCCTCGTAACCTGTCCCGACCTTCTCTTAGAGATATCCAGA 3380
|||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||
Sbjct 3448 CTTGGGCTTCCTCTGAAACTCCGCGTAAACTGTCTCGACCTTCTCTCAGAGATATCCAGA 3507
Query 3381 TGCAGGAGGTGAAGAAGCAACAGTCTCTGTCCCACAGTCCAAAGACAAAAACATCAGGCT 3440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3508 TGCAGGAGGTGAAGAAGCAACAGTCTCTGTCCCACAGTCCAAAGACAAAAACATCAGGCT 3567
Query 3441 TCACAGTCGCAACCGGGCAAGGATCTCCATCAGATTCGCCTGGAACAAATCGCTGGTTCA 3500
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3568 TCACAGTCGCAACCGGGCAAGGATCTCCATCAGATTCGCCTGGAACTAATCGCTGGTTCA 3627
Query 3501 AACCAGAGATAGATGCTCCATCAGCAATACGATCAATCCAGATAGAAGAAAAAGCCATGA 3560
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3628 AACCAGAGATAGATGCTCCATCAGCAATCCGATCAATCCAGATAGAAGAAAAAGCCATGA 3687
Query 3561 AGGATCTGCGACGCTTCTACAGCAGCGTGAAG 3592
||||||| || ||||||||||| |||||||||
Sbjct 3688 AGGATCTCCGCCGCTTCTACAGTAGCGTGAAG 3719
Score = 313 bits (169), Expect = 1e-83
Identities = 197/210 (94%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 3689 AGATGATGTCTCCACTGTACATTGGGTCTCCTCTTACCTGGTCAGCCAtttttttt-t-t 3746
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| | |
Sbjct 3718 AGATGATGTCTCCACTGTTCATTGGGTCTCCTCTTAACTGGTCAGCCATTTTTTTTCTCT 3777
Query 3747 ttCTTTCAATTTGTTAGTCTTTGGTAGTAGCTGTCAAAGGAATACCCATGCTTATGTACA 3806
|||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 3778 TTCTTTCAATGTGTTAGTCTTTGGTAGTAGCTGTCAAAGTAATACTCATGCTTATGTACA 3837
Query 3807 TCACTGGTGTACACGAAGCTCTTTAGTAGTCTTCA-AAAGCCATTTTAGATGTACATATT 3865
||||||||||||| ||||||||||||||||||||| ||| |||||||||||||| |||||
Sbjct 3838 TCACTGGTGTACATGAAGCTCTTTAGTAGTCTTCACAAA-CCATTTTAGATGTATATATT 3896
Query 3866 TCGTAATAATAAGAAAACGCTTAGATGATT 3895
||||||||||||||||| ||||| ||||||
Sbjct 3897 TCGTAATAATAAGAAAAAGCTTATATGATT 3926
Score = 300 bits (162), Expect = 8e-80
Identities = 212/234 (91%), Gaps = 12/234 (5%)
Strand=Plus/Plus
Query 1 CAGAAACTTTTTTATACGCCTCTGTTTCTCAT--GG-AGAGGGTATATTCTCTGTTTTGA 57
||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct 13 CAGAAACTTTTTTATACGCCTCTGTTTCTTATGGGGAAGAGGGTATATTCTCTGTTTTGA 72
Query 58 TTCGCTTCT-TATGAACACATTGAATTTTTCCATAGAAGATTCCATTGTGCTCATAT-AT 115
||||||||| | | ||||||||||| ||||||||||||||||||||||||||| | | ||
Sbjct 73 TTCGCTTCTGTCTTAACACATTGAAATTTTCCATAGAAGATTCCATTGTGCTCTTTTAAT 132
Query 116 -C-c-tctctttctctctgttttaaatacctgtctttaatcgcttctctct--ctctctc 170
| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 133 CCTCTTCTCTTTCTCTCTGTTTTAAATACCTGTCTTTAATCGCTTCTCTCTATCTCTCTC 192
Query 171 t-T-GTTAAATATCATCGGAGTTCAATTTCAGTTCTCTCGGCTCTCTTATGAAG 222
| | ||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct 193 TCTTGTTAAATCTCATCGGAGTTCAATTTCAGGACTCTCGGCGCTCTTATGAAG 246
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 194045735524
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5