BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477636 Length=425 Score E Sequences producing significant alignments: (Bits) Value AT3G03830.1 | Symbols: | SAUR-like auxin-responsive protein fa... 357 5e-98 > AT3G03830.1 | Symbols: | SAUR-like auxin-responsive protein family | chr3:979984-980488 REVERSE LENGTH=505 Length=505 Score = 357 bits (193), Expect = 5e-98 Identities = 248/272 (91%), Gaps = 13/272 (5%) Strand=Plus/Plus Query 1 ATCATCAACCACAAGCAATCCAGATCTTGAATCTCTTTAGTCCTTCCTTTGCTCTCATAC 60 ||||||||||||||||||||| | ||| ||||||||||||||||| || ||||| Sbjct 1 ATCATCAACCACAAGCAATCC--A----GAA---CTTTAGTCCTTCCTTTGATCCCATAC 51 Query 61 ATATTCAGAAGCTTCAAGAATCAAATC-TGGAGATAAGAAAATGGCTTTAGTGAGAAGTA 119 ||||||||||||||| ||||||||| | | ||| |||||||||||||| |||||||||| Sbjct 52 ATATTCAGAAGCTTCGAGAATCAAA-CTTCTAGACAAGAAAATGGCTTTGGTGAGAAGTA 110 Query 120 TCTTCAGTGCAAAGAAGATTCTTGGTGGCTCTTTAGCAAGTACAAGCAAAGCACCAAAAG 179 ||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||| Sbjct 111 TCTTCAGTGCAAAGAAGATTCTTGGCGGCTCCTTAGCAAGAACGAGCAAAGCACCAAAAG 170 Query 180 GTTTTCTTGCGGTGTACGTCGGTGAGAACCAAGAGAAGAAGCAGAGATACTTTGTACCAG 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 171 GTTTTCTTGCGGTGTACGTCGGTGAGAACCAAGAGAAGAAGCAGAGATACTTTGTACCAG 230 Query 240 TCTCATACTTGA-GCCAGCCTTCATTTCAGGC 270 |||||||||||| || |||||||||||||||| Sbjct 231 TCTCATACTTGAAGC-AGCCTTCATTTCAGGC 261 Score = 217 bits (117), Expect = 8e-56 Identities = 134/142 (94%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 284 ATAACTTCTCGGATCCAATGATGACCGTCAGTAGGAAAAACAACAATTTTTCTTGTAAAT 343 ||||||||| |||||||||||||| | |||||||||||||||| || ||||||||||||| Sbjct 350 ATAACTTCTAGGATCCAATGATGATCATCAGTAGGAAAAACAATAA-TTTTCTTGTAAAT 408 Query 344 AGATTGACAAATTTTCATCTTATTAACCAAAAGATTTGTTCCAAAGGATATGAAAGCCAG 403 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 409 AGATTGACAAATTTTCATCTTATTAACCAAAAGATTTGTTCCAAAC-ATATGAAAGCCAG 467 Query 404 TTTTGTGTAAGAAACGATGCTA 425 ||||||||||||||| |||||| Sbjct 468 TTTTGTGTAAGAAACAATGCTA 489 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20157367349 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5