BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477677
Length=750
Score E
Sequences producing significant alignments: (Bits) Value
AT3G04150.2 | Symbols: | RmlC-like cupins superfamily protein ... 928 0.0
AT3G04190.1 | Symbols: | RmlC-like cupins superfamily protein ... 466 1e-130
AT3G04180.1 | Symbols: | RmlC-like cupins superfamily protein ... 418 4e-116
AT3G04200.1 | Symbols: | RmlC-like cupins superfamily protein ... 215 5e-55
> AT3G04150.2 | Symbols: | RmlC-like cupins superfamily protein
| chr3:1089417-1090468 REVERSE LENGTH=805
Length=805
Score = 928 bits (502), Expect = 0.0
Identities = 687/772 (89%), Gaps = 30/772 (4%)
Strand=Plus/Plus
Query 1 GGAAAACAAACCACACAAACATTTTATTTCAATATGATGAAAGGTCTTGTTCAGTTTCTT 60
|||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 8 GGAAAA-AAACCACACAAACATTTTATTAGAATATAATGAAAGGTCTTGTTCAGTTTCTT 66
Query 61 GTAGCTAAAATCATCTTGTTGGCTTTAGCATCTTCATTTGTATATTGTTACGATCCAAAT 120
|||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||
Sbjct 67 GTAGCTAAAATCATCTTGTTGGTTTTAGCATCTACATTTGTACATTGTTACGATCCAAAT 126
Query 121 CCTCTTCAAGACTATACTGTGTTGCCACCAACGAAACTAATGGAG-T---------T-TA 169
||||| |||||| ||||||||||||||||||| ||||||| ||| | | ||
Sbjct 127 CCTCTCCAAGAC--TACTGTGTTGCCACCAACGGAACTAATAGAGCTGAAACCCAATATA 184
Query 170 TGTT-T---G--TGT-TGGC--TGTTTTCGTGAATGGAAAGTTTTGTAAAGATCCAAAAC 220
||| | | | | | |||||| |||||||||||||||||||||||||||||||
Sbjct 185 GGTTCTCAAGAATCTCAACCAGTGTTTTTGTGAATGGAAAGTTTTGTAAAGATCCAAAAC 244
Query 221 TAGTAACTGCCAATGATTTTTATTATTCTGGCCTAAACATTCCCGGAAACACCAACAACC 280
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 245 TAGTAACTGCCAATGATTTTTTTTATTCTGGCCTAAACATTCCCGGAAACACCAGCAACC 304
Query 281 GCCTTGGCGCATCGATCACTAATGTTGATGTCAGCTTAATCCCTGGTCTCAACACTCTTG 340
||||||| |||||| |||| ||||||||||||| |||||||||||||||||||||||
Sbjct 305 GCCTTGGTGCATCGGTCACCGATGTTGATGTCAGAAGAATCCCTGGTCTCAACACTCTTG 364
Query 341 GGGTTGCCATTGCCCGCTTAGATTTCGCCCCCGGCGGTCAACTTTCACCGCACATACACC 400
| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
Sbjct 365 GCATTGCCATTGCCCGCTTGGATTTCGCCCCCGGCGGTCAACTTCCACCGCACATACATC 424
Query 401 CACGTGCCTCCCAGATCATCTTAGTCCTCAAGGGAGAGCTCTCAGTCGGATTTGTGTCGT 460
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 425 CACGTGCCTCCCAGATCATCTTAGTCCTCAAGGGACAGCTCTCGGTCGGATTTGTGTCGT 484
Query 461 CAAACGAATACAACTATACGCTCTTTTCCAAAG-TTCTTTATCCCGGAGATGTGTTGGTT 519
| ||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||| | |
Sbjct 485 CGAACGACTACAACTATACGCTCTTTTCC-AAGATTCTTTACCCCGGAGATGTGTTTGCT 543
Query 520 TTTCCCATCGGTTTGGTACAGTTTCATGCAAACAACAATAAGAAGACAAATGCGGTTGCG 579
||||||||||||||||||||||| ||||| ||| || | ||||||| |||||||||||
Sbjct 544 TTTCCCATCGGTTTGGTACAGTTCCATGCTAAC-AC--TGGGAAGACACATGCGGTTGCG 600
Query 580 ATTAGCGCA-TACGGGAGTCAAAACCCCGGTGTGATCCCAGTAGGTAACGCGGTTTTCGG 638
||| ||| | | |||||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct 601 ATTGGCGTAGT-CGGGAGTCAAGACCCCGGTGTGATCCCAATAGGTGACGCGGTTTTCGG 659
Query 639 GTCAAACCCCTTGATTGATCCAAAGCTTTTGGCTAAAGCTTTTGCGTTGGACGTGAACAT 698
||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GTCGAATCCTTTGATTGATCCAAAGCTTTTGGCTAAAGCTTTTGCGTTGGACGTGAACAT 719
Query 699 AGTGCGACATGTCCAGAGGGTGTTTTCTTCCGATGCTGACATAGTTAATTAG 750
|||||| ||||| |||||||||||||||||||| | | |||||||||| |||
Sbjct 720 AGTGCGTCATGTTCAGAGGGTGTTTTCTTCCGAAGGTTACATAGTTAAATAG 771
> AT3G04190.1 | Symbols: | RmlC-like cupins superfamily protein
| chr3:1101878-1102763 REVERSE LENGTH=767
Length=767
Score = 466 bits (252), Expect = 1e-130
Identities = 546/680 (80%), Gaps = 52/680 (8%)
Strand=Plus/Plus
Query 37 ATGAAAGGTCTTGTTCAGTTTCTTGTAGCTAAAATCATCTTGTTGGCTTTAGCATCTTCA 96
|||||||||||| | || |||||| |||| |||||||| ||||||||||||||||||||
Sbjct 17 ATGAAAGGTCTTCTGCATTTTCTTTTAGCCAAAATCATTTTGTTGGCTTTAGCATCTTCG 76
Query 97 TTTGTATATTGTTACGATCCAAATCCTCTTCAAGACTATACTGTGTTGCCACCAACGAAA 156
||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||
Sbjct 77 TTTGTATATTGTTACGAACCATCTCCTCTTCAAGACTA--CTGTGTTGCCACCAACGAAA 134
Query 157 CTAATGGAGTTTATGTTTGTGTTGGCTGTTTTCGTGAATGGAAAGTTTTGTAAAGATCCA 216
|||||||||||||||| ||||||||||| || |||||||||
Sbjct 135 CTAATGGAGTTTATGTA-------------------AATGGAAAGTTCTGCAAAGATCCA 175
Query 217 AAAC-TAGTAACTGCCAATGATTTTTATTA-TTCTGGCCTAAACATTCCCGGAAACACCA 274
||| | ||||| || ||||||||||| | ||| ||||||||| |||||||||| ||||
Sbjct 176 AAATGT-GTAACGGCGAATGATTTTTAC-ACTTCCGGCCTAAACGTTCCCGGAAATACCA 233
Query 275 ACAACCG--CCTTGGCG-CATCGATCACTAAT-GTTGATGTCAGCTTAATCCCTGGTCTC 330
|| ||| || |||| || ||||| | || ||||||| ||| |||||||||
Sbjct 234 GCA-CCGGTCCG-GGCGTCAAA-ATCACCG-TCGTGGATGTCAAAAGAATGCCTGGTCTC 289
Query 331 AACACTCTTGGGGTTGCCATTGCCCGC-TTAGATTTCGCCCCCGGCGGTCAACTTTC-AC 388
|||||||||||||| | |||||||||| || || |||||||| ||||||| | | | ||
Sbjct 290 AACACTCTTGGGGTCGACATTGCCCGCATT-GACTTCGCCCCGGGCGGTCTA-TACCCAC 347
Query 389 CGCACATACACCCACGTGCCTCCCAGATCATCTTAGTCCTCAAGGG-AGAGCTCT-CAGT 446
| |||| |||||||||| | | ||||| |||||||| | ||||| | |||| | | ||
Sbjct 348 CTCACACCCACCCACGTGGCAGCGAGATCTTCTTAGTCATGAAGGGCA-AGCTTTTC-GT 405
Query 447 CGGATTTGTGTCGTCAAACGAATACAACTATACGCTCTTTTCCAAAGTTCTTTATCCCGG 506
|||||||||||||| |||||||||||||| |||||||| |||||||||||||||| ||
Sbjct 406 TGGATTTGTGTCGTCGAACGAATACAACTACACGCTCTTCACCAAAGTTCTTTATCCGGG 465
Query 507 AGATGTGTTGGTTTTTCCCATCGGTTTGGTACAGTTTCATGCAAACAACAATAAGAAGAC 566
|||||| || || ||||||| |||||| |||| |||||||| || | || | |||
Sbjct 466 AGATGTATTTGTGTTTCCCAAAGGTTTGATACAATTTCATGCGAATATTGG-AA-A-GAC 522
Query 567 AAATGCGGTTGCGATTAGC-GCATAC-GGGAGTCAAAACCCCGGT-GTGATCCCAGTAGG 623
||||||||||| |||| || ||| || ||||| |||||||||||| | |||| | ||||
Sbjct 523 AAATGCGGTTGTGATT-GCTGCA-ACTGGGAGCCAAAACCCCGGTAG-GATCATAATAGG 579
Query 624 TAACGCGGTTTTCGGGTC-AAACCCCTTGATTGATCCAAAGCTTTTGGCTAAAGCTTTTG 682
||| ||||||||||| || ||||| ||||||||||| ||| ||||||||||||||||||
Sbjct 580 TAATGCGGTTTTCGGATCGAAACCT-TTGATTGATCCCAAGGTTTTGGCTAAAGCTTTTG 638
Query 683 CGTTGGACGTGAACATAGTG 702
|||||||| | |||| ||||
Sbjct 639 CGTTGGACTTCAACAAAGTG 658
> AT3G04180.1 | Symbols: | RmlC-like cupins superfamily protein
| chr3:1097475-1098422 REVERSE LENGTH=819
Length=819
Score = 418 bits (226), Expect = 4e-116
Identities = 560/711 (79%), Gaps = 64/711 (9%)
Strand=Plus/Plus
Query 37 ATGAAAGGTCTTGTT-CAGTTTCT-TGTAGCTAAAATCATCTTGTTGGCTTTAGCATCTT 94
||| |||||||| || |||||||| | |||| |||||||| |||||||||||||||||||
Sbjct 108 ATGGAAGGTCTT-TTGCAGTTTCTAT-TAGCCAAAATCATTTTGTTGGCTTTAGCATCTT 165
Query 95 CATTTGTATATTGTTACGATCCAAATCCTCTTCAAGACTATACTGTGTTGCCACCAACGA 154
| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||
Sbjct 166 CGTTTGTATATTGTTACGACCCATCTCCTCTTCAAGACTA--CTGTGTTGCCACCAACGA 223
Query 155 AACTAATGGAGTTTATGTTTGTGTTGGCTGTTTTCGTGAATGGAAAGTTTTGTAAAGATC 214
|||||||||||||||||| |||||| |||| || |||||||
Sbjct 224 AACTAATGGAGTTTATGTA-------------------AATGGAGAGTTCTGCAAAGATC 264
Query 215 CAAAAC-TAGTAACTGCCAATGATTTTTATTA-TTCTGGCCTAAACATTCCCGGAAACAC 272
|||||| | ||||| |||||||||||||| | ||| ||||||||| | |||||||||||
Sbjct 265 CAAAACGT-GTAACAACCAATGATTTTTAT-ACTTCCGGCCTAAACGTCCCCGGAAACAC 322
Query 273 CAACAACCG-CCTTGGCGCATCGAT-CACTAAT-GTTGATGTCAGCTTA-A-TCCCTGGT 327
|| || | | || ||||| | || ||| | || |||||| | | | | ||||||
Sbjct 323 CATCATCGGGCCC-GGCGC-TAGAAACACCG-TCGTGGATGTC-GAA-AGACTGCCTGGT 377
Query 328 CTCAACACTCTTGGGGTTGCCATTGCCCGCT-TAGA-TTTCGCCCCCGGCGGTC-A-ACT 383
||||||||||||||||| | ||||||||||| | || ||| ||||| ||||||| | ||
Sbjct 378 CTCAACACTCTTGGGGTCGACATTGCCCGCTAT-GACTTT-GCCCCGGGCGGTCTAGACC 435
Query 384 TTCACCGCACATACACCCACGTGCCTCCCAGATCATCTTAGTCCTCAAGGG-AGAGCTCT 442
|||| |||| |||||| |||| | ||||||| |||||||| | ||||| | |||| |
Sbjct 436 --CACCTCACACACACCCGCGTGGCAGCCAGATCTTCTTAGTCATGAAGGGCA-AGCTTT 492
Query 443 -CAGTCGGATTTGTGTCGTCAAACGAATACAACTATACGCTCTTTTCCAAAGTTCTTTAT 501
| || || |||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct 493 TC-GTTGGTTTTGTGTCGTCAAATGAATACAACTACACGCTCTTCACCAAAGTTCTTTAT 551
Query 502 CCCGGAGATGTGTTGGTTTTTCCCATCGGTTTGGTACAGTTTCATGCAAACAACAATAAG 561
|| |||||||| || || ||||||| |||||| |||| |||||||| || | | |
Sbjct 552 CCGGGAGATGTATTTGTGTTTCCCAAAGGTTTGATACATTTTCATGCGAATAT---TGGG 608
Query 562 AAGACAAATGCGGTTGCGATTA--GCGCATACGGGAGTCAAAACCCCGGT-GTGATCCCA 618
|||||||||| |||| |||| ||| | ||||| ||| |||||||| | |||| |
Sbjct 609 GAGACAAATGCCGTTGTGATTTCTGCGGGT--GGGAGCCAAGACCCCGGTAG-GATCATA 665
Query 619 GTAGGTAACGCGGTTTTCGGGTCAAACCCCTTGATTGATCCAAAGCTTTTGGCTAAAGCT 678
||||| | ||||||||||| ||||| || ||||||||||| ||| ||||||||||||||
Sbjct 666 ATAGGTGATGCGGTTTTCGGATCAAAACCTTTGATTGATCCCAAGGTTTTGGCTAAAGCT 725
Query 679 TTTGCGTTGGACGTG-AACATAGTGCGACATGTCCAGAGG-GTGTTTTCTT 727
|||||||||||| | |||| |||| | || | ||| | ||||||||||
Sbjct 726 TTTGCGTTGGAC-TACAACAAAGTGAAATATCTTCAG-GCAGTGTTTTCTT 774
> AT3G04200.1 | Symbols: | RmlC-like cupins superfamily protein
| chr3:1103616-1104601 REVERSE LENGTH=841
Length=841
Score = 215 bits (116), Expect = 5e-55
Identities = 399/528 (76%), Gaps = 49/528 (9%)
Strand=Plus/Plus
Query 32 ATATGATGAAAGGT-CTTGTTCAG-TTTCTTGTAGCTAAAATCATCTTGTTGGCTTTAGC 89
|||||||| || || ||| ||| | || |||||| || || | ||||| |||||||||||
Sbjct 27 ATATGATGGAA-GTGCTTCTTC-GCTTGCTTGTAACTCAAGTTATCTTATTGGCTTTAGC 84
Query 90 ATCTTCATTTGTATATTGTTACGATCCAAATCCTCTTCAAGACTATACTGTGTTGCCACC 149
| |||||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||
Sbjct 85 AACTTCATTTGTATCTTGTTACGATCCAAATCCTCTTCAAGACTTT--TGTGTTGCCGCC 142
Query 150 AACGAAACTAATGGAGTTTATGTTTGTGTTGGCTGTTTTCGTGAATGG-AAAGTTTTGTA 208
| |||||||||| || | |||| | | || | ||||| ||| || ||||
Sbjct 143 AGCGAAACTAAT--AG---A-GTTT-T-----C-GT----G--AATGGCAAA-TTCTGTA 182
Query 209 AAGATCCAAAA-CTAGTAACTGCCAATGATTTTTATTATTCTGGCCTAAACATT-CCCGG 266
||||||||||| | |||||| ||||||||||| | |||||| || || ||||| ||||
Sbjct 183 AAGATCCAAAATC-AGTAACGGCCAATGATTTCTCTTATTCGGGACTCAACATCGCCCG- 240
Query 267 AAACACCAACAACCGCCTTGGCGC-A-TCGATCACTAAT-GTTGATGTCAGCTTAATCCC 323
|||||||| |||| ||| || | | | | |||| || || ||||||| | ||||||
Sbjct 241 AAACACCACCAACTTCCTCGGTTCTAAT-G-TCAC-AACCGTAGATGTCAACAAAATCCC 297
Query 324 TGGTCTCAACACTCTTGGGGT-TGCCATTGCCCGCTTAGA-TTTCGCCCCCGGCGGTCAA 381
||| |||||||| || || || | || | || |||||||| ||| || | || ||||||
Sbjct 298 TGGCCTCAACACCCTCGGAGTCTCCC-TCGCTCGCTTAGACTTT-GCTCAGGGAGGTCAA 355
Query 382 CTTTCACCGCACATACACCCACGTGCCTCCCAGAT-CATCTTAGTC-CTCAAGGGAGAGC 439
||||||||||||| ||||| ||| | | || | || ||||| | ||| ||| | |
Sbjct 356 AACCCACCGCACATACATCCACGCGCCACTGAAATAC-TCGTAGTCAC-CAAAGGAAAAC 413
Query 440 TCTCAG-TCGGATTTGTGTCGTCAAACGAATACAACTATACG-CTCTTTTCCAAAGTTCT 497
|| | | | || |||||||| || ||| || ||||| ||| | || || | ||| |||||
Sbjct 414 TC-CTGGTTGGGTTTGTGTCTTCGAACCAAGACAACAATA-GACTGTTCTACAAGGTTCT 471
Query 498 TTATCCCGGAGATGTGTTGGTTTTTCCCATCGGTTTGGTACAGTTTCA 545
| | | ||||| || || || |||||||| |||||| |||| |||||
Sbjct 472 TAAACGAGGAGACGTTTTTGTGTTTCCCATTGGTTTGATACATTTTCA 519
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 36419756575
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5