BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477685
Length=852
Score E
Sequences producing significant alignments: (Bits) Value
AT3G04250.1 | Symbols: | F-box associated ubiquitination effec... 758 0.0
AT3G23680.1 | Symbols: | F-box associated ubiquitination effec... 294 8e-79
AT4G33290.1 | Symbols: | F-box and associated interaction doma... 206 4e-52
AT3G23685.1 | Symbols: | F-box associated ubiquitination effec... 202 5e-51
AT5G41500.1 | Symbols: | F-box and associated interaction doma... 159 3e-38
AT3G22421.1 | Symbols: | F-box and associated interaction doma... 122 4e-27
AT3G22940.1 | Symbols: | F-box associated ubiquitination effec... 119 5e-26
AT5G41510.1 | Symbols: | F-box and associated interaction doma... 108 1e-22
AT5G36200.1 | Symbols: | F-box and associated interaction doma... 62.1 9e-09
> AT3G04250.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:1121950-1122828 FORWARD LENGTH=879
Length=879
Score = 758 bits (410), Expect = 0.0
Identities = 563/635 (89%), Gaps = 18/635 (3%)
Strand=Plus/Plus
Query 218 ACAAACTCGACGATCACATAATCTGTTTTGATTTCACAAGTGAGAGAGTTGGGCCGCTTC 277
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 263 ACAAAATCGACGATCACATAATCTGTTTTGATTTCACAAGTGAGAGATTTGGGCCACTTT 322
Query 278 TGCGTCTACCGTTTTGCGCTGGGCTTCATGACTATGTGACTTTATCTTGTGTTAGAGAAG 337
|||||||||||||| ||||||| | | |||||||||||||||||||||||||||||||||
Sbjct 323 TGCGTCTACCGTTTAGCGCTGGCCATGATGACTATGTGACTTTATCTTGTGTTAGAGAAG 382
Query 338 AGAAGCTTGCGGCTTTACTTACCCACAACGAATCAAATCCATATGAGTTTGAGATATGGA 397
|||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||
Sbjct 383 AGAAGCTTGCGGCTTTACTTACGCACAACGACTGGAATCCATATGAGTTTGAGATATGGA 442
Query 398 TTACGACTAAGATTGAGTATGAAAAAGTGTCATGGAGCAAGATTTTGGAAATGGATACAG 457
| ||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct 443 TCACGACTAAGATCGAGTATGATAAAGTGTCGTGGAGCAAGATCTTGGAAATGGATACAG 502
Query 458 GACCATTGGCTGACAGGCCGATTGCATTTACACATGAGAGTTTCTTTGTTGACGAGGAGA 517
||||||||||||||| ||||||||||| || ||||| ||||||||| ||||||||||||
Sbjct 503 GACCATTGGCTGACATGCCGATTGCATATATACATGGGAGTTTCTTCATTGACGAGGAGA 562
Query 518 AGAATGTCTCCATGGGTTTTGATGACTTGAATCGCCACACAGTTAACATCATTGGAGAGG 577
|||| |||||||||| ||||||| | | | | ||| ||| |||||||||||| |
Sbjct 563 AGAAAGTCTCCATGGTTTTTGAT--C---A--C-C-ACAGAGTCAACATCATTGGAAAAA 613
Query 578 CCGGATACTTTATAGAATTGGATCTCGGAGTACCTGTAGCCGACATAAACTGTGGGGCAC 637
| ||||| |||| ||||||||||||| |||||| |||||||| |||||| ||| |
Sbjct 614 CTGGATATTTTAGAGAATTGGATCTCCGAGTACATGTAGCCGGCATAAAGTGT-----A- 667
Query 638 GAAGGCCACATTTGTGCCCTTATGTTCCAAGTTCAGTGCAAATCAAACAACCTCCCGGAG 697
| | ||||||||||||||||| ||||||| |||| ||||||||||||||||||| ||||
Sbjct 668 G--G-CCACATTTGTGCCCTTACGTTCCAAATTCAATGCAAATCAAACAACCTCCGGGAG 724
Query 698 GCAAAAGGAAACGAAAAACCATTCTAGAAAAGCGTCAATATGATCAAAACATGTTGAGAC 757
||||||||||||||||| ||||||||||| |||||| |||||| |||||||||||||||
Sbjct 725 GCAAAAGGAAACGAAAACCCATTCTAGAACAGCGTCGATATGACCAAAACATGTTGAGAG 784
Query 758 TTGCCGCCTTTATAAAGCGAACCAAGCAGGAGGAAAATAAATGGAGAAAACGAGTCCGCG 817
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||
Sbjct 785 TTGCCGCCTTTATAAAGCGAACCAAGCAGGAGGATAATAAATGGAAAAAACGAGTCCTCG 844
Query 818 TGGGTCTAAAGAAGAAAACGATTTTTGAAGCCTAA 852
|||||| |||||| |||||| |||| ||||||||
Sbjct 845 AGGGTCTGAAGAAGCAAACGAATTTTAAAGCCTAA 879
Score = 296 bits (160), Expect = 2e-79
Identities = 190/204 (93%), Gaps = 3/204 (1%)
Strand=Plus/Plus
Query 1 TACAGGTACGCTCTAGGATACGTGAACAAGAACAACTCTTGTCGAAGCCACAAAGTCTTG 60
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 4 TACAGGTACGCTCTAGGGTACGTGAACAAGAACAACTCTTGTCGTAGCCACAAAGTCTTG 63
Query 61 AGGCTTATAGATGATTACATCTATTTGGCCGTGAACCATGCACCCGAAAACCGGTTTTCA 120
||| |||||||| ||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct 64 AGGTTTATAGATCATTACATCTCTTCGGCCGTGAACCACGCACCCGAAAACCGGTTTTCA 123
Query 121 TGGTATGAAATCTACGATATTGAAACCTATTTATGGACAACTCTTGACGTcccccccATA 180
||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||
Sbjct 124 TGGTATGAAATCTACGATATTGAAACCGATTTATGGACAACTCTTGATGTCCCTCC-ATA 182
Query 181 TTGGAG-GATATCGTGTTATCAGC 203
||||| | |||||||||||||||
Sbjct 183 TTGGATAG-TATCGTGTTATCAGC 205
> AT3G23680.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8526366-8527173 REVERSE LENGTH=708
Length=708
Score = 294 bits (159), Expect = 8e-79
Identities = 420/540 (78%), Gaps = 42/540 (8%)
Strand=Plus/Plus
Query 236 TAATCTGTTTTGATTTCACAAGTGAGAGAGTTGGGCCGCTTCTGCGTCTACCGTTTTGCG 295
|||||||||||||||| |||||||||||| |||| || ||||||| ||| |||||| | |
Sbjct 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTG 232
Query 296 CTGGGCTTCA-TGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGCTTTA 354
||||| | | ||||| | |||| ||||||||||||||||||||||||||||||| ||||
Sbjct 233 GTGGGCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTA 291
Query 355 CTT-ACCCACAACGAATCAAATCCATATGAGTTTGAGATATGGATTACGACTAAGATTGA 413
||| | | || | |||||||||||||||||| |||| ||| ||||||||| ||||||||
Sbjct 292 CTTCAGC-ACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGATTGA 350
Query 414 GTA-TGAAAAAGTGTCATGGAGCAAGATT-TTG-GAAATGGATACAGGACCATTGGCTGA 470
| | || | | |||| ||||||||| || ||| || |||| |||| ||| |||
Sbjct 351 G-ACTGGAGAGGTGTTGTGGAGCAAG-TTCTTGAGAG-TGGAAACAGCTGGATT---TGA 404
Query 471 CAGGCC-GATTGC-ATT-TACACATGAGA-GTTTCTTTGTTGACGAGGAGAAGAATGTCT 526
|| | || | ||| || | ||| || ||||||| |||||||||||||||| |||
Sbjct 405 TAGTTATG-TTCCTATTATA-A-ATG-GAAGTTTCTTCATTGACGAGGAGAAGAAAGTCG 460
Query 527 CCATGGGTTTTGATGACTTG-AATCGCCACACAGTTAACATCATTGGAGAGGCCGGATAC 585
|||| |||||||| || | | |||||||||||| ||||||||||||||||||| ||||||
Sbjct 461 CCATTGGTTTTGAAGA-TGGGAATCGCCACACAATTAACATCATTGGAGAGGCTGGATAC 519
Query 586 TTTATAGAATTGGATCTCGGAGTACCTGTA-GCCGAC-ATAA-ACTGTGGGGCACGAAGG 642
|| | | ||||||||||| | | | || | ||| | || | ||| | || | |
Sbjct 520 TTGAGGGCATTGGATCTCGTTGGAGAT-TATGGAGACCA-AAGA-TGTAAG--AC-A-G- 571
Query 643 CCACATTTGTGCCCTTATGTTCCAAGTTCAGTGCAAATCAAACAACCTCCCGGAGGCAAA 702
| | ||||| ||||||||||||||| |||||||||||| |||||| ||||| ||
Sbjct 572 --A--TCTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGGGGAA 627
Query 703 AGGAAACGAA-AAACC-ATTCTAGAAAAGCGTCAATATGATCAAAACATGTTGAGACTTG 760
||| || ||| ||| | | | | || |||| || ||||||| ||||||||| ||||||||
Sbjct 628 AGGGAA-GAAGAAAGCGAAT-TGGAGAAGCTTCGATATGATGAAAACATGTCGAGACTTG 685
> AT4G33290.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:16049573-16050865 FORWARD LENGTH=1293
Length=1293
Score = 206 bits (111), Expect = 4e-52
Identities = 300/389 (77%), Gaps = 22/389 (6%)
Strand=Plus/Plus
Query 230 ATCACATAATCTGTTTTGATTTCACAAGTGAGAGAGTTGGGCCGCTTCTGCGTCTACCGT 289
|||| ||||||||||||||||| ||||| |||||| |||| |||||||||| |||||||
Sbjct 680 ATCATATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGTCCGCTTCTGCCTCTACCGG 739
Query 290 TTTGCGCT-GGGCT--T---CATGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGC 343
|| || | | | | |||| |||||||||| ||||||||||||||||| ||||
Sbjct 740 TTAACGTTATAGATAATGAATATGAATATGTGACTTCATCTTGTGTTAGAGAAGGGAAGA 799
Query 344 TTGCGGCTTTACTTAC-CCACAACGAATCAAATCCATATGAGTTTGAGATATGGATTACG 402
||||||||||| || | |||||||| ||| ||||||||||| |||||||||||||||||
Sbjct 800 TTGCGGCTTTA-TTTCAGCACAACGATTCATATCCATATGAGCTTGAGATATGGATTACG 858
Query 403 ACTAAGATTGAGTATGAAAAAGTGTCATGGAGCAAGATT-TTG-GAAATGGATACAGGAC 460
|||||||||||| |||| ||||| |||| |||| || ||| ||| || | | | ||
Sbjct 859 ACTAAGATTGAGGCGGAAATGGTGTCGTGGAACAAG-TTCTTGAGAATTG-ACATTGAAC 916
Query 461 C-ATTGGCTGACAGGCCGATTGCATTTACACATGAGAGTTTCTTTGTTGACGAGGAGAAG 519
| | | ||| | || |||||| | ||| | ||||||| ||||||||||||||
Sbjct 917 CTAACAA-TAACATAATGGTTCCATTTATATATGGGGGTTTCTTCATTGACGAGGAGAAG 975
Query 520 AAT---GTCTCCATGGGTTTTGATGAC---TT-GAATCGCCACACAGTTAACATCATTGG 572
|| ||| || |||| |||||||| || | |||| | ||| ||||||| |||||
Sbjct 976 AAGAAAGTCGCCTTGGGGTTTGATGAAGAGTTCGG-TCGCAAAACATTTAACATTATTGG 1034
Query 573 AGAGGCCGGATACTTTATAGAATTGGATC 601
||||| ||||| |||| |||||| ||||
Sbjct 1035 AGAGGATGGATATTTTAGAGAATTCGATC 1063
> AT3G23685.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8527239-8528317 FORWARD LENGTH=993
Length=993
Score = 202 bits (109), Expect = 5e-51
Identities = 163/189 (86%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 228 CGATCACATAATCTGTTTTGATTTCACAAGTGAGAGAGTTGGGCCGCTTCTGCGTCTACC 287
||||| | |||||||||||||||| |||||||||||| |||| |||||||||| ||| ||
Sbjct 549 CGATCGCTTAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCC 608
Query 288 GTTTTGCGCTGGGCTTCA-TGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTG 346
|||| | | ||||| | | ||||| | |||| ||||||||||||||||||||||||||||
Sbjct 609 GTTTAGTGGTGGGCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTG 667
Query 347 CGGCTTTACTT-ACCCACAACGAATCAAATCCATATGAGTTTGAGATATGGATTACGACT 405
||| ||||||| | | || | |||||||||||||||||| |||| |||||||||||||
Sbjct 668 CGGTTTTACTTCAGC-ACGATGAATCAAATCCATATGAGCTTGACTTATGGATTACGACC 726
Query 406 AAGATTGAG 414
|||||||||
Sbjct 727 AAGATTGAG 735
> AT5G41500.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16604002-16605213 FORWARD LENGTH=1212
Length=1212
Score = 159 bits (86), Expect = 3e-38
Identities = 192/239 (80%), Gaps = 23/239 (10%)
Strand=Plus/Plus
Query 229 GATCACATAATCTGTTTTGATTTCACAAGTGAGAGAGTTGGGCCGCTTCTGCGTCTACCG 288
||||||||||||||||||||||| |||||||||||| |||| |||||||| | ||||||
Sbjct 682 GATCACATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTCTACCTCTACC- 740
Query 289 TTTTGCGCTGGGCTTCATGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTGCG 348
| || | || ||| | |||||| |||||||||||||| |||||||||||||||
Sbjct 741 TAGGGCTCAAGG----ATGTC-ATGTGAGTTTATCTTGTGTTAAAGAAGAGAAGCTTGCA 795
Query 349 GCTTTACTT----A-C--C--CACAACGAATCAAATC-CATATGAGTTTGAGATATGGAT 398
| ||||||| | | | ||| |||| ||| | | |||||||||||||||||||||
Sbjct 796 GTTTTACTTAAGCACCGGCTGCACCACGATTCATA-CGAATATGAGTTTGAGATATGGAT 854
Query 399 TACGACTAAGATTGA-GTATGAAAAAGTGTCATGGAGCAAGATT-TTG-GAAATGGATA 454
||||||||||||||| || |||| ||||| ||||||||| || ||| ||| ||||||
Sbjct 855 TACGACTAAGATTGACGTC-GAAATGGTGTCGTGGAGCAAG-TTCTTGAGAA-TGGATA 910
> AT3G22421.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7949116-7950396 REVERSE LENGTH=1281
Length=1281
Score = 122 bits (66), Expect = 4e-27
Identities = 406/557 (73%), Gaps = 76/557 (14%)
Strand=Plus/Plus
Query 229 GATCACATAATCTGTTTTGATTTCACAAGTGAGAGAGTTGGGCCGCTTCTGCGTCTACCG 288
||||||||||||||||||||||| |||||||||||| |||| |||||| ||| | | |||
Sbjct 709 GATCACATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTATGCCTTTGCCG 768
Query 289 TTT-TGCGCTGGGC-TTC--ATGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCT 344
||| | | | | | | | | || ||||||| |||||||||||||||||||||||||
Sbjct 769 TTTGTTAGATATACGTCCGGAAGCCT-TGTGACTCTATCTTGTGTTAGAGAAGAGAAGCT 827
Query 345 TGCGGCTTTACTTACCCACAACGAATCAAATCCATATGAGTTTGAGATATGGATTACGAC 404
||||| ||| || |||| | | | | | | || ||| |||||||||||||
Sbjct 828 TGCGGTTTTGTTTTGTAACAATGC-T-A---C--T--G--TT-GAGGTATGGATTACGAC 875
Query 405 TAAGATTGAGTA-TGAAAA-AGTGTCATGGAGCAAGATT-TTGGAAA-TGGATACAGGAC 460
|||||||||| | ||| || | | || ||||||||| || ||| | | || ||| | |
Sbjct 876 TAAGATTGAG-ACTGACAAGATT-TCGTGGAGCAAG-TTCTTG-ACAGTGAATAT-GTA- 929
Query 461 CATTGGCTGACAGGCCGATTGCATTTACACATGAGAGTTTCTTTG-TTGACGAGG-AGAA 518
| | |||| | || | | | | | |||||| ||| ||||||||| | ||
Sbjct 930 --T-GT-TGAC---C---TT-C-TGGA-AG--G-GAGTTT-TTTCATTGACGAGGTA-AA 971
Query 519 GAATGTCTCC-ATGGGTTTTGATG-ACT--TGAATCGCCACACAGTTAACATCATTGGAG 574
||| || | | ||| ||||||| || |||||||| | |||||| ||||| | ||||
Sbjct 972 GAAAGT-TGCTATGATTTTTGATATACCGATGAATCGCGAGACAGTTTACATCGTGGGAG 1030
Query 575 AGGCCGGATACTTTATAGAATTGGATCTCGGAGTACCTGT--A-GCCGACATAA-ACTGT 630
|||| ||| || ||| |||| || |||| ||| |||||| | | |||| || ||| |
Sbjct 1031 AGGCTGGAAACGTTAAAGAACTGCATCTAGGACAACCTGTTGATGTTGACA-AACACTTT 1089
Query 631 GGGGCACGAAGGCCAC-ATTTGTGC-C-CTTATGTTCCAAGTTCAGTGCAAATCAAACAA 687
| | |||| ||||||| | ||||||||||||||| |||||||||||| |||
Sbjct 1090 T---C-C-----CCACTATTTGTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAA 1140
Query 688 CCTCCCGGAGGCAAAAGGAAACGAA-AAACCATTCTAGAAAAGCGTCAAT---ATGATCA 743
||||| ||| || ||||||||| || ||| || ||||||||| |||| || ||||| |
Sbjct 1141 CCTCCAGGATGCCAAAGGAAAC-AAGAAAGCAGTCTAGAAAAACGTCGATGTGATGATGA 1199
Query 744 AAACATGT-TGAGACTT 759
|||||| | | ||||||
Sbjct 1200 AAACATATCT-AGACTT 1215
> AT3G22940.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8131468-8132706 FORWARD LENGTH=1239
Length=1239
Score = 119 bits (64), Expect = 5e-26
Identities = 402/554 (73%), Gaps = 67/554 (12%)
Strand=Plus/Plus
Query 229 GATCACATAATCTGTTTTGATTTCACAAGTGAGAGAGTTGGG-CCGCTTCTGCGTCTACC 287
||||| ||||||||||||||||||||||||||||| ||| || |||||||||| | | ||
Sbjct 667 GATCATATAATCTGTTTTGATTTCACAAGTGAGAG-GTTTGGTCCGCTTCTGCTTTTGCC 725
Query 288 GTTTTGCGCTG-GGCTTCATGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTG 346
|||| | | | || | || | ||| ||| || ||||||||||||| ||||||||||
Sbjct 726 GTTTAGTGATTTGGATGG-TG--T-TGTTACTCTAGCTTGTGTTAGAGAGGAGAAGCTTG 781
Query 347 CGGCTTTACTTACCCACAACGAATCAAATCCATATGAGTTTGAGATATGGATTACGACTA 406
|||||||| || ||| | || | | | | || ||| | |||||||||| ||
Sbjct 782 CGGCTTTAGTTTGTCACGAGGA-TG---T---T--G--TT-GAGGTTTGGATTACGATTA 829
Query 407 AGATTGAGTATGAAAAAG-TGTCATGGAGCAAGATT-TTGGAAA-TGGATACAGGACCAT 463
|||||||| || || | | ||||||||| || ||| | | || || | | |
Sbjct 830 AGATTGAGGCC-AATGAGGTATTGTGGAGCAAG-TTCTTG-ACAGTGAATGTTG-AT--T 883
Query 464 TGGCTGAC-AGG--CCGA-TTGCATTTACACATGAG-AGTTTCTTTGTT-GACGAGGAGA 517
||| ||| || |||| || || | ||| ||| | ||||| ||| | ||||||||||
Sbjct 884 TGGGTGATGAGATTCCGAGTT-CACTGACATATG-GTAGTTT-TTTCATCGACGAGGAGA 940
Query 518 AGAATGTCTCC-ATGGGTTTTGATGA--CTT-GAATCGC--C-ACACAGTTAACATCATT 570
|||| || | | ||| ||||||| | ||| | ||||| | |||||||| |||||||
Sbjct 941 AGAAAGT-TGCTATGATTTTTGATAAAACTTTGGATCGCGGCGACACAGTTCACATCATG 999
Query 571 GGAGAGGCCGGATACTT-TATAGAA-TTGGATCTCGGAGTACCTGTAGCCGACATAAACT 628
|||||||| ||||| | | | || ||| ||||||||| ||| || | |||||
Sbjct 1000 GGAGAGGCTGGATA-TGGTGGACAAGTTG-ATCTCGGAGAACCGGTT----A-ATAAAA- 1051
Query 629 GTGGGGCACGAAGGCCACATT-TGTGCCCTTATGTTCCAAGTTCAGTGCAAATCAA-ACA 686
| ||| | |||| || ||||| |||||||||| |||| |||||||||||| | |
Sbjct 1052 G------ACGTTGCCCAC-TTGTGTGCTCTTATGTTCCGAGTTTAGTGCAAATCAAGA-A 1103
Query 687 ACCTCCCGGAGGCAAAAGGAAAC-GAAAAACCATTCTAGAAAAGCGTCAATATGATCAAA 745
|||| | ||| | ||||||||| | ||| | | | |||||||||||||||||| || ||
Sbjct 1104 ACCTGCAGGATTCCAAAGGAAACAGCAAAGCAAGT-TAGAAAAGCGTCAATATGTTCGAA 1162
Query 746 ACATGTTGAGACTT 759
|||| | || ||||
Sbjct 1163 ACATATCGAAACTT 1176
> AT5G41510.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16607124-16608326 FORWARD LENGTH=1203
Length=1203
Score = 108 bits (58), Expect = 1e-22
Identities = 180/235 (77%), Gaps = 24/235 (10%)
Strand=Plus/Plus
Query 235 ATAATCTGTTTTGATTTCACAAGTGAGAGAGTTGGGCCGCTTCT-GCGTCTACCGTTTTG 293
|||||| |||| ||||| ||||| |||||| |||| || ||||| || ||| || | |
Sbjct 688 ATAATCCGTTTCGATTTTACAAGAGAGAGATTTGGACCCCTTCTAGC-TCTGCC--TACG 744
Query 294 CGCT-GGGCTTCATGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGCTT 352
| | | | || | | | ||||| |||||||||||||| ||||||||||||||| ||||
Sbjct 745 -GATCGTGAATCTTCA-TTTGTGAGTTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTT 802
Query 353 TACTT----A-C--C--CACAACGAATCAAATC-CATATGAGTTTGAGATATGGATTACG 402
|| || | | | ||| | || ||| | | |||||||||||||||||||||||||
Sbjct 803 TATTTAAGCACCGGCTGCACCATGATTCATA-CGAATATGAGTTTGAGATATGGATTACG 861
Query 403 ACTAAGATTGAG-TATGAAAAAGTGTCATGGAGCAAGATT-TTG-GAAATGGATA 454
|||||||||||| | |||| || || ||||||||| || ||| ||| ||||||
Sbjct 862 ACTAAGATTGAGGTC-GAAATGGTTTCGTGGAGCAAG-TTCTTGAGAA-TGGATA 913
> AT5G36200.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:14244106-14246296 REVERSE LENGTH=1416
Length=1416
Score = 62.1 bits (33), Expect = 9e-09
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand=Plus/Plus
Query 643 CCACATT-TGTGCCCTTATGTTCCAAGTTCAGTGCAAATCAAACAA 687
|||| || ||||| |||||||||||||||||||||||||||| |||
Sbjct 1126 CCAC-TTGTGTGCTCTTATGTTCCAAGTTCAGTGCAAATCAAGCAA 1170
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 41543639569
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5