BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477692
Length=752
Score E
Sequences producing significant alignments: (Bits) Value
AT3G04320.1 | Symbols: | Kunitz family trypsin and protease in... 1153 0.0
AT3G04330.1 | Symbols: | Kunitz family trypsin and protease in... 761 0.0
> AT3G04320.1 | Symbols: | Kunitz family trypsin and protease
inhibitor protein | chr3:1143791-1144661 FORWARD LENGTH=871
Length=871
Score = 1153 bits (624), Expect = 0.0
Identities = 712/755 (94%), Gaps = 4/755 (1%)
Strand=Plus/Plus
Query 1 ACAAAAAGATGAAAACATTCCGATTGATGATGATCTCTTTCTTGCTAGTTGCAATAACAA 60
||| ||||||||||||||||| |||||||||||||||||||||| | |||||||||||||
Sbjct 17 ACACAAAGATGAAAACATTCCAATTGATGATGATCTCTTTCTTGTTCGTTGCAATAACAA 76
Query 61 CAACATCCGGTGTCGTTGGTGAGGGTAACGACGTGGTTTATGATGGCGAAGGAGACCCGG 120
||||||||||||| ||| |||||||||||||||| |||||||| ||||||||||| ||||
Sbjct 77 CAACATCCGGTGTGGTTAGTGAGGGTAACGACGTAGTTTATGACGGCGAAGGAGATCCGG 136
Query 121 TTAAGCCCAACGTTCCGTATTACATCAGCTTCATGACGTCGGATTACAACATGTGGATCT 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 137 TTAAGCCCAACGTTCCATATTACATCAGCTTCATGACGTCGGATTACAACATGTGGATCT 196
Query 181 GCCGAAGGCAATATGGATCTACTGATCCCAACTCATGCCCACAACAACCGTTAATGGTCA 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 197 GCCGAATGCAATATGGATCTACTGATCCCAACTCATGCCCACAACAACCGTTAATGGTCA 256
Query 241 CTCATCCAGATATGGCAGCACCCACACCAGTTATGTTTGTATTAGCATCCAAATCAGATG 300
|||||||| || | |||||||| |||||||||||||||||||||||| ||| |||||||
Sbjct 257 CTCATCCAAATTTAGCAGCACCAACACCAGTTATGTTTGTATTAGCAAACAAGTCAGATG 316
Query 301 TCGTACGTGAATCAGCCAAACTTAAGATTAAGTTCGTAGGTCCCCGTCAGTGCGGTAAAT 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 317 TCGTACGTGAATCAGCCAAACTTAAGATTAAGTTCGTAGGTCCCCGTCAGTGTGGTAAAT 376
Query 361 CCGGGTTTTGGAGAGTTGTTCAGAGGAACTCTTTAGAAGGTGAAGTAGTCCTCAACGGAT 420
|||||||||||| ||| |||||||| ||||||| ||||||||||||| ||||||||||||
Sbjct 377 CCGGGTTTTGGAAAGTAGTTCAGAGAAACTCTTCAGAAGGTGAAGTATTCCTCAACGGAT 436
Query 421 CTAAATCTAAGTCAAACAATGATAGTACGTTCGCCATCCATAAAACTAACGAATACTACA 480
||||||||| |||| ||||||| || || ||||||||||| |||||||||||||||||||
Sbjct 437 CTAAATCTATGTCACACAATGACAGCACATTCGCCATCCACAAAACTAACGAATACTACA 496
Query 481 AGTTCACTTTCGGTGACGGTGACTATCCAACGACTATCAGTATGACCAACGACTATCCGA 540
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 497 AGTTTACTTTCGGTGACGGTGACTATCCAACGACTATCAGTATGACCAACGACTATCCGA 556
Query 541 TATATAGGTTGTTATCAAAGCGGTTATCTGGAGAGATGGAGATTTATTTCTACAAGAACC 600
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 557 TATATAGGTTGTTATCGAAGAGGTTATCTGGAGAGATGGAGATTTATTTCTACAAGAACC 616
Query 601 TGACTACGGGTGAAGGCTAA--TGTTCTGTTTTCACTTGCCTTTTTATGTAATGTTTTCA 658
|||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||
Sbjct 617 TGACTACGAGTGAAGGCTAAAATGTTCTGTTTTCACTTACCTTTTTATATAATGTTTTCA 676
Query 659 TTTTTAAAATCAAACAAAACTTGTTGTAATAACATGAATAATCAAATAAACTAAACTCGG 718
||| |||||||||| |||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 677 TTTCTAAAATCAAATAAAACTTGTTGTAATAACATGA-TAATCAAACAAACTAAACTCGG 735
Query 719 AGATCATAA-GTTGGTTCATCTATTGCGTATTCAT 752
||||||||| |||||||||||||||||||||||||
Sbjct 736 AGATCATAAAGTTGGTTCATCTATTGCGTATTCAT 770
> AT3G04330.1 | Symbols: | Kunitz family trypsin and protease
inhibitor protein | chr3:1145757-1146365 FORWARD LENGTH=609
Length=609
Score = 761 bits (412), Expect = 0.0
Identities = 549/613 (90%), Gaps = 17/613 (3%)
Strand=Plus/Plus
Query 9 ATGAAAACATTCCGATTGATGATGATCTCTTTCTTGCTAGTTGCAATAACAACAACATCC 68
|||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||
Sbjct 1 ATGAAAACATTCCGATCGATGTTGATCTCTCTCTTGCTCGTTGCAATAACAACAACATCC 60
Query 69 GGTGTCGTTGGTGAGGGTAACGACGTGGTTTATGATGGCGAAGGAGACCCGGTTAAGCCC 128
| || |||| |||||||||| ||||||||||||| ||||||||||| | ||||||||||
Sbjct 61 -G-GT-GTTGTTGAGGGTAACTACGTGGTTTATGACGGCGAAGGAGATCAGGTTAAGCCC 117
Query 129 AACGTTCCGTATTACATCAGCTTCATGACGTCGGATTACAACATGTGGATCTGCCGAAGG 188
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 118 AACGTTCCGTACTACATCAGCTTCATGACGTCGGATTACAACATGTGGATCTGCCGAAAG 177
Query 189 CAATATGGA--TCTACTGATCCCAACTCATGCCCACAACAACCGTTAATGGTCACTCATC 246
|| ||||| |||| |||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 178 -AA-ATGGAGATCTAATGATCCCAACTCCTGCCCACAGCAACCGTTAATGGTCACTCATC 235
Query 247 CAGATATGGCAGCACCCACACCAGTTATGTTTGTATTAGCATCCAAATCAGAT---GTCG 303
|| ||||||||||||||||||| ||||||||||| ||| || ||||||||| ||||
Sbjct 236 CAAATATGGCAGCACCCACACCGGTTATGTTTGTGTTATCAAACAAATCAGAGACAGTCG 295
Query 304 TACGTGAATCAGCCAAACTTAAGATTAAGTTCGTAGGTCCCCGTCAGTGCGGTAAATCCG 363
||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||
Sbjct 296 TACGTGAATCAGCCAAACTCAAGATTAAGTTCGTAGATCCCCGTCCCTGCGGTGAATCCG 355
Query 364 GGTTTTGGAGAGTTGTTCAGAGGAACT-CTTTAGAAGGTGAAGTAGTCCTCAACGGATCT 422
||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||||
Sbjct 356 GGTTTTGGAGAGTAGTTCAGAG-AACTTCTTCAGAAGGTGAAGTAGTCCTCAACGGATCT 414
Query 423 AAATCTAAGTCAAACAATGATAGTACGTTCGCCATCCATAAAACTAACGAATACTACAAG 482
|||||| |||| |||||| ||||||||||||||| | ||||||||||||||||||||
Sbjct 415 GAATCTACGTCAGACAATGCCAGTACGTTCGCCATCGAGCAAACTAACGAATACTACAAG 474
Query 483 TTCACTTTCGGTGACGG---TGACTATCCAACGACTATCAGTATGA-CCAACGACTATCC 538
||||||||||||||||| |||||||| ||||||||||||| | | ||||||| |||||
Sbjct 475 TTCACTTTCGGTGACGGCCCTGACTATCTAACGACTATCAGTTT-ATCCAACGATTATCC 533
Query 539 GATATATAGGTTGTTATCAAAGCGGTTATCTGGAGAGATGGAGATTTATTTCTACAAGAA 598
||||||||||||||||| ||| ||| |||||||| |||||||||||||||||||||||
Sbjct 534 AATATATAGGTTGTTATCCAAGAAGTTCTCTGGAGAAATGGAGATTTATTTCTACAAGAA 593
Query 599 CCTGACTACGGGT 611
||| |||| ||||
Sbjct 594 CCTTACTATGGGT 606
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 36520224869
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5