BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477694
Length=2219
Score E
Sequences producing significant alignments: (Bits) Value
AT3G04350.1 | Symbols: | Plant protein of unknown function (DU... 3284 0.0
AT5G18490.1 | Symbols: | Plant protein of unknown function (DU... 1037 0.0
> AT3G04350.1 | Symbols: | Plant protein of unknown function (DUF946)
| chr3:1153727-1156776 REVERSE LENGTH=2256
Length=2256
Score = 3284 bits (1778), Expect = 0.0
Identities = 2028/2148 (94%), Gaps = 20/2148 (1%)
Strand=Plus/Plus
Query 1 TCAACCTTCTCCTCTTTCTTACGCAATTACAACTTCAACGCCTCTCCCTCTCTCTGTTCG 60
||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||
Sbjct 1 TCAACCTTCTCCTCTTTCTTACGCAATTACAACTTCAACGCCTCT--CTATCTC--TTCG 56
Query 61 CTGTGAATGTCGAGATAGTCATAAGCTCTCTGC-TTTCAAATTTCTTTCAAATTGAGGTA 119
| |||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||
Sbjct 57 CCGTGAATGTCGAGATAGTCGTAAGCTCTCTGCTTTTCAAATTTCTCTCAAATTGAGGTA 116
Query 120 TAGAGAGAAGGGCACAGAGATAGAGAGCGAGAGGCATTGGAAACAGTGATTTTCCCAGTT 179
|||||| ||||||||||||||||||| ||| ||||| |||||| |||||||||||||||
Sbjct 117 GAGAGAG-AGGGCACAGAGATAGAGAGAGAGGGGCATAGGAAACGGTGATTTTCCCAGTT 175
Query 180 CCCGGAGAAACAATCGGCTGATTTCTCTACAATCGGAGAATCTGAACCTTACCCACTCGA 239
||||||| |||||||||||||||||||| ||||| ||||||| ||||| ||||||||||
Sbjct 176 CCCGGAGGAACAATCGGCTGATTTCTCTGTAATCGAAGAATCTAAACCTCACCCACTCGA 235
Query 240 ATTCAGCTCGTGGGTTTTGGTGGGTTTTTATCAATTGTCCAGATTCTGGAGAAAAATCTT 299
| |||||||||||||||||| |||| | ||| |||| |||| ||||||||||||||||||
Sbjct 236 AATCAGCTCGTGGGTTTTGGGGGGTCTCTATTAATT-TCCAAATTCTGGAGAAAAATCTT 294
Query 300 GAATTT-TATCAAGATGTTTGGGTGTGATTGTTTTTACCGGAGCAGAGGACTCTCTGTGT 358
| |||| | ||||||||||||||||||||||||||||| ||||||||||| |||| | ||
Sbjct 295 GTATTTCT-TCAAGATGTTTGGGTGTGATTGTTTTTACTGGAGCAGAGGAATCTCCGAGT 353
Query 359 TGGATTCGGAATCGTCTGAGCCAAAGCCCTTCTCGCTTCCATCTCCTCTTCCTAGTTGGC 418
|||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 354 TGGATTCGGAATCGTCCGAGCCAAAGCCCTTCTCACTTCCGGCTCCTCTTCCTAGTTGGC 413
Query 419 CACAAGGTAAAGGTTTTGCCACGGGAAGAATAAACTTAGGAGAAATAGAAGTGGTGAAAA 478
| |||||||||||||||||||| |||||||| | | ||||||||||||||||||||||||
Sbjct 414 CGCAAGGTAAAGGTTTTGCCACAGGAAGAATTAGCCTAGGAGAAATAGAAGTGGTGAAAA 473
Query 479 TCACCAAGTTCCATAGAGTTTGGAGCTCTGATTCATCGCACGGCAAATCAAAATGTGCAA 538
|||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||| |
Sbjct 474 TCACCAAGTTCCATCGAGTTTGGAGCTCTGATTCATCACACGACAAATCAAAACGTGCTA 533
Query 539 CATTTTACAGAGCCGAGGAAATTCCAGAAGGTTTCCATTGCTTTGGTCACTATTGCCAAC 598
|||||||||||||||| || ||||||||||| ||||||||| |||||||||||||||| |
Sbjct 534 CATTTTACAGAGCCGATGACATTCCAGAAGGATTCCATTGCCTTGGTCACTATTGCCAGC 593
Query 599 CAACCGATCAGCCCTTGAGAGGTTATGTACTTGCAGCTCGGTCTAGCAAAGCCGTCAATG 658
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 594 CAACCGATCAGCCCTTGAGAGGTTATGTACTTGCAGCTCGGACTAGCAAAGCCGTCAATG 653
Query 659 CTGATGATCTCCCACCCCTGAAAAAGCCTGTGAGTTATTCTTTAGTTTGGAGTGCAGATT 718
|||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 654 CTGATGATTTCCCGCCCTTGAAAAAGCCTGTGAGTTATTCTTTAGTTTGGAGTGCAGATT 713
Query 719 CAGAGAAAAATGGCAGTGGCTATTTCTGGCTACCTAATCCTCCGGTTGGTTACAGAGCAA 778
||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 714 CAGAGAAAAATGGTGGTGGTTATTTCTGGCTACCTAATCCTCCGGTTGGTTACAGAGCAA 773
Query 779 TGGGAGTTATTGTAACCCCTGGACCAGGTGAACCTGAACCAGAGGAGGTTAGATGTGTAA 838
|||||||||||||||||| || |||||||||||||||| |||||||||| ||||||||||
Sbjct 774 TGGGAGTTATTGTAACCCATGAACCAGGTGAACCTGAAACAGAGGAGGTCAGATGTGTAA 833
Query 839 GAGAGGATCTCACAGAGAGTTGTGAAACCTCTGAGATGATACTTGAGGTGGGTTCTTCGA 898
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 834 GAGAGGATCTTACAGAGAGTTGTGAAACCTCTGAGATGATACTTGAGGTGGGTTCTTCGA 893
Query 899 AGAATTCGAACGGCTCTAGTTCTCCTTTTAGTGTGTGGAGCACCCGACCTTGCGAGAGAG 958
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 894 AGAAGTCGAACGGCTCTAGTTCTCCTTTTAGTGTATGGAGCACCCGACCTTGCGAGAGAG 953
Query 959 GGATGCTGTCACAAGGTGTAGCTGTTGGGTCATTCTTTTGCTGCACTTATGATCTGTCTT 1018
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct 954 GGATGCTGTCACAAGGTGTCGCTGTTGGGTCATTCTTTTGCTGCACGTATGATCTGTCGT 1013
Query 1019 CTGATAGGACGGTCCCTGATATTGGATGCTTAAAGAATCTTGATCCGACCTTACACGCGA 1078
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1014 CTGAGAGGACGGTCCCTGATATCGGATGCTTAAAGAATCTTGATCCGACCTTACACGCGA 1073
Query 1079 TGCCAAATCTCGACCAGGTCCATGCGGTTATTGAACACTTCGGACCAACAGTCTACTTCC 1138
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1074 TGCCAAATCTCGACCAGGTCCATGCGGTTATCGAACACTTCGGACCAACAGTCTACTTCC 1133
Query 1139 ACCCAGAAGAGGCTTACATGCCTTCATCCGTACAATGGTTCTTTAAGAATGGAGCTTTGT 1198
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1134 ACCCAGAAGAGGCTTACATGCCTTCATCTGTACAATGGTTCTTTAAGAATGGAGCTTTGT 1193
Query 1199 TGTACCGGTCAGGGAAATCACAAGGTCAACCGATTAACTCCACGGGCTCGAACTTGCCTG 1258
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1194 TGTACCGGTCAGGGAAATCAGAAGGTCAACCGATTAACTCCACGGGCTCGAACTTGCCTG 1253
Query 1259 CTGGAGGATGCAATGATATGGAATTCTGGATAGATCTTCCCGAAGACGAAGAAGCAAAGA 1318
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 1254 CTGGAGGATGCAATGATATGGATTTCTGGATAGATCTTCCTGAAGACGAAGAAGCAAAGA 1313
Query 1319 GTAATCTCAAGAAAGGAAACCTTGAAAGCTCGGAGCTTTACGTTCATGTGAAACCAGCAC 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 GTAATCTCAAGAAAGGAAACCTTGAAAGCTCGGAGCTTTACGTTCATGTGAAACCAGCAC 1373
Query 1379 TTGGTGGAACCTTT-ACCGACATTGTGATGTGGATTTTCTGCCCCTTTAATGGCCCGGCC 1437
||||||||| |||| |||||||| || ||||||||||||||||||||||||||||| |||
Sbjct 1374 TTGGTGGAA-CTTTCACCGACATCGTTATGTGGATTTTCTGCCCCTTTAATGGCCCAGCC 1432
Query 1438 ACGCTCAAAATCGGGCTATTCACGTTACCTATGACCCGCATAGGAGAACATGTCGGTGAT 1497
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1433 ACGCTCAAAATCGGCCTATTCACGTTACCTATGACCCGCATAGGAGAACATGTCGGTGAT 1492
Query 1498 TGGGAACATTTCACTTTCCGCATATGCAACTTCTCTGGTGAGCTTTGGCAAATGTT-TTT 1556
|||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct 1493 TGGGAACATTTCACTTTCCGCATATGTAATTTCTCTGGTGAGCTTTGGCAAATGTTCTTT 1552
Query 1557 CTCTCAGCATAGTGGTGGTGGTTGGGTTGATGCATCAGATATTGAGTTTGTGAAAGATAA 1616
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1553 -TCTCAGCATAGTGGTGGTGGTTGGGTTGATGCATCAGATATTGAGTTTGTGAAAGATAA 1611
Query 1617 CAAACCGGCTGTGTACTCATCTAAACACGGACATGCGAGTTTCCCTCACCCGGGAATGTA 1676
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1612 CAAACCGGCTGTGTACTCATCTAAACACGGACATGCGAGTTTCCCTCATCCAGGAATGTA 1671
Query 1677 CCTCCAAGGCTCGTCAAAGCTCGGGATTGGAGTCAGAAACGATGTTGCAAAAAGCAAGTA 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1672 CCTCCAAGGCTCGTCAAAGCTCGGGATTGGAGTCAGAAACGATGTTGCAAAAAGCAAGTA 1731
Query 1737 CATTGTGGATTCAAGCCAAAGGTATGTGATTGTAGCAGCTGAGTATTTAGGTAAAGGAGC 1796
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1732 CATTGTGGATTCAAGCCAAAGGTATGTGATAGTAGCAGCTGAGTATTTAGGTAAAGGAGC 1791
Query 1797 TGTGATAGAGCCGTGCTGGTTACAGTATATGAGGGAATGGGGTCCGACCATTGCATATGA 1856
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1792 TGTGATAGAGCCGTGCTGGTTACAGTATATGAGAGAATGGGGTCCGACCATTGCATATGA 1851
Query 1857 TTCGGGGTCTGAGATCAATAAGATCATGAATCTTCTTCCTTTGGTTGTTAGGTTCTCTAT 1916
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1852 TTCAGGGTCTGAGATCAATAAGATCATGAATCTTCTTCCTTTGGTTGTTAGGTTCTCTAT 1911
Query 1917 TGAGAACATTGTTGATTTGTTTCCCATTGCTCTTTATGGAGAAGAAGGTCCTACGGGGCC 1976
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1912 TGAGAACATTGTTGATTTGTTTCCCATTGCTCTTTATGGAGAAGAAGGTCCCACAGGGCC 1971
Query 1977 AAAGGAGAAAGATAACTGGGAAGGAGATGAGATGTGCTGAAAGAAGACAAACCT-TTGCG 2035
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1972 AAAGGAGAAAGATAACTGGGAAGGAGATGAGATGTGCTGAAAGAAGACAAACCTCTTT-G 2030
Query 2036 TGAAGAATAAGGTTTAGTGGGAGACGAAGTCTCTTGTTGACGCAGAGAGATTTGGTCTC- 2094
||| || | |||||| ||| ||| ||||||||||||||| | ||| | |||| ||||
Sbjct 2031 TGATCAAGACGGTTTAATGGAAGATGAAGTCTCTTGTTGAATCGGAGGGTTTTGATCTCT 2090
Query 2095 ATCTTTGTTACGTG-TTGTGACTAATATGTA-TTTACAGTATACTAGA 2140
| || | || || |||||||||||||||| ||||||||||||||||
Sbjct 2091 A-CTCTACTA-GTAATTGTGACTAATATGTAATTTACAGTATACTAGA 2136
> AT5G18490.1 | Symbols: | Plant protein of unknown function (DUF946)
| chr5:6134152-6136765 REVERSE LENGTH=1996
Length=1996
Score = 1037 bits (561), Expect = 0.0
Identities = 1365/1736 (79%), Gaps = 123/1736 (7%)
Strand=Plus/Plus
Query 325 GATTGTTTTTACCGGAGCAGAGGACTCTCTGTGTTGGATTCGGAATCGTCTGAGCCAAAG 384
||||| || ||| ||| | ||| |||| | |||||| ||||||||||| ||| |||||
Sbjct 221 GATTGCTTCTACTGGAATAAAGGTTTCTCCGAGTTGGAATCGGAATCGTCCGAGTCAAAG 280
Query 385 CCCTTCTCGCTTCCATCTCCTCTTCCT-AGTTGGCCACAAGGTAAAGGTTTTGCCACGGG 443
||||||||||||||||||||||||||| | | |||||||||| | ||||||||| || ||
Sbjct 281 CCCTTCTCGCTTCCATCTCCTCTTCCTCAAT-GGCCACAAGGCAGAGGTTTTGCTACTGG 339
Query 444 AAGAATAAA-CTTAGGAGAAATAGAAGTGGTGAAAATCACCAAGTTCCATAGAGTTTGGA 502
||| |||| ||| |||||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct 340 AAGGATAAGTCTT-GGAGAAATCCAAGTGGTGAAAGTCACCGAGTTCGATAGAGTTTGGA 398
Query 503 GCTCTGATTCATCGCACGGCAAATCAAAATGTGCAACATTTTACAGAGCC-GAGGAAATT 561
| || | |||| || |||| || ||| ||| | ||||||| | || | || ||
Sbjct 399 AATGTGGCACCTCGCGTGGTAAATTAAGATGCGCATCTTTTTACAAA-CCTGTGGGGATA 457
Query 562 CCAGAAGGTTTCCATTGCTTTGGTCACTATTGCCAACCAACCGATCAGCCCTTGAGAGG- 620
|||||||||||||||||| ||||||| || ||||| |||| | ||||||| ||||||||
Sbjct 458 CCAGAAGGTTTCCATTGCCTTGGTCATTACTGCCAGCCAAACAATCAGCCATTGAGAGGC 517
Query 621 TTATGTACTTGCAGCTCGGTCTAGCAAAGCC-G-TCAA-T-GCTGATGATC-TCCCACC- 674
|| ||| |||||||||||| ||| ||| ||| | ||| | || ||||||| || | ||
Sbjct 518 TT-TGTTCTTGCAGCTCGGGCTAACAA-GCCCGGTCATCTAGCGGATGATCATCGC-CCT 574
Query 675 CCT--GAAAAAGCCTGTGAGTTATTCTTTAGTTTGGAGTGCAGATTCAGAGAAAAATGGC 732
||| |||||||||| ||| ||||||||||||||||||| |||||||||| |
Sbjct 575 CCTTTGAAAAAGCCTTTGAATTATTCTTTAGTTTGGAGTTCAGATTCAGA------T--- 625
Query 733 AGTGGCTATTTCTGGCTACCTAATCCTCCGGTTGGTTACAGAGCAATGGGAGTTATTGTA 792
|| ||| |||||| ||||||||||||| |||||||| ||||| |||||||||||||
Sbjct 626 --TG-CTACTTCTGGTTACCTAATCCTCCTGTTGGTTATAGAGCCGTGGGAGTTATTGTC 682
Query 793 ACCCCTGGACCAG-GTGAACCTGAACCAGAGGAGGTTAGATGTGTAAGAGAGGATCTCAC 851
|| |||| ||| | || |||||| || || || ||||||||| |||||||||| ||
Sbjct 683 ACTGATGGATCAGAG-GAGCCTGAAGTTGATGAAGTGAGATGTGTACGAGAGGATCTTAC 741
Query 852 AGAGAGTTGTGAAACCTCTGAGATGATACTTGAGGTGGGTTCTTCGAAGAATTCGAACGG 911
|||||| ||||||||| | | ||| | |||| | ||| | | | | | ||
Sbjct 742 AGAGAGCTGTGAAACC---G-G-TGAGA----AGGT---T-CTT-G--G--T--GTA-GG 780
Query 912 CTCTAGTTCTCCTTTTAGTGTGTGGAGCACCCGACCTTGCGAGAGAGGGATGCTG-TCAC 970
| | || ||| | ||| |||||||| ||||||||||||||| || || || |
Sbjct 781 ----A-T-CT--TTTAA-TGTTTGGAGCACTAAACCTTGCGAGAGAGGTATT-TGGTCTC 830
Query 971 AAGGTGTAGCTGTTGGGTCATTCTTTTGCTGC-ACTTATGATCTGTCTTCTGATAGGACG 1029
|| || | |||||||||||| |||||| | ||| |||||||||||||||||| |
Sbjct 831 GTGGAGTGGAGGTTGGGTCATTCGTTTGCT-CTACTAATGATCTGTCTTCTGATAATAAA 889
Query 1030 GTC-CC-TGAT-ATTG-GATGCTT-AAAGAATCTTGATCCGA-CCTTACACGCG-ATGCC 1082
| | || ||| |||| | || || ||| ||||| || |||| ||| ||| | | |||||
Sbjct 890 GCCGCCATGAACATTGCG-TGTTTGAAA-AATCTCGACCCGAGCCT-ACAAG-GTATGCC 945
Query 1083 AAATCTCGACCAGGTCCATGCGGTTATTGAACACT-TCGGACCAACAGTCTACTTCCA-C 1140
|||||| || ||||||||||| ||||| | || | | ||||| | ||||||||||| |
Sbjct 946 AAATCTTGATCAGGTCCATGCACTTATTCACCATTAT-GGACCGATGGTCTACTTCCATC 1004
Query 1141 CCAGAAGAGGCTTACATGCCTTCATCCGTACAATGGTTCTTTAAGAATGGAGCTTTGTTG 1200
|| |||||| ||||||||||||| || || | |||||||||||| || ||||||||||||
Sbjct 1005 CC-GAAGAGACTTACATGCCTTCGTCTGTGCCATGGTTCTTTAAAAACGGAGCTTTGTTG 1063
Query 1201 TACCGGTCAGGGAAATCACAAGGTC-AACCGATTAACTCCA-CGGGCTCGAACTTGCCTG 1258
|||||| |||||||| ||||| | ||||||||||||| | | ||||||||||||||||
Sbjct 1064 CACCGGTTTGGGAAATCTCAAGG-CGAACCGATTAACTC-AGCTGGCTCGAACTTGCCTG 1121
Query 1259 CTGGAGGATGCAAT-GATATGGAA-TTCTGGATAGATCTTCCC-GAAGACGAAGAAGCAA 1315
| || ||| | || ||| ||| |||||||| ||||| ||| ||||| ||||||| |
Sbjct 1122 CGGGTGGA-GAAAACGATG-GGAGCTTCTGGATTGATCT-CCCTGAAGATGAAGAAGTTA 1178
Query 1316 AGA-GTAATCTCAAGAAAGGAAACCTTGAAAGCTCGGAGCTTTACGTTCATGTGAAACCA 1374
|| ||||||| ||||| ||||| | |||||||| ||||||||||| || ||||||||
Sbjct 1179 -GAAGTAATCTAAAGAAGGGAAATATAGAAAGCTCAGAGCTTTACGTCCACGTGAAACCC 1237
Query 1375 GCACTTGGTGGAACCTTT-ACCGACATTGTGATGTGGATTTTCTGCCCCTTTAATGGCCC 1433
|| ||||| || | ||| || ||| |||| |||||||| ||||| || |||||||| ||
Sbjct 1238 GCGCTTGGCGGGAT-TTTCACGGACGTTGTAATGTGGATATTCTGTCCATTTAATGGTCC 1296
Query 1434 GGCCACGCTCAAAATCGGGCTAT-TCACGTTACCTATGACCCGCATAGGAGAACATGTCG 1492
||||| |||||||||||||| | ||||| |||| |||| |||| | ||||| ||||| |
Sbjct 1297 AGCCACTCTCAAAATCGGGCT-TCTCACGGTACCAATGAACCGCCTTGGAGAGCATGTTG 1355
Query 1493 GTGATTGGGAACATTTCACTTTCCGCATATGCAACTTCT-CTGGTGAGCTTTGGCAAATG 1551
||||||||||||||||||| ||||| ||| |||||||| | || || ||| || |||
Sbjct 1356 GTGATTGGGAACATTTCACATTCCGGATAAGCAACTTCAAC-GGCGATCTTACACAGATG 1414
Query 1552 TTTTTCTCTCAGCATAGTGGTGGTGGTTGGGTTGATGCATCAGATATTGAGTTTGTGAAA 1611
|| ||||| |||||||||||||| || |||||||||| ||| ||| |||||||||| |||
Sbjct 1415 TTCTTCTCACAGCATAGTGGTGGAGGATGGGTTGATGTATCGGATCTTGAGTTTGTCAAA 1474
Query 1612 G-AT--AACAAACCGGCTGTGTACTCATCTAAACACGGACATGCGAGTTTCCCTCACCCG 1668
| | || ||||||| |||||||||||| |||||||| || || |||||||| ||||||
Sbjct 1475 GGAAGCAATAAACCGGTTGTGTACTCATCCAAACACGGTCACGCTAGTTTCCCACACCCG 1534
Query 1669 GGAATGTACCTCCAAGGCTCGTCAAAGCTCGGGATTGGAGTCAGAAACGATGTTGCAAAA 1728
|||||||| || |||||| |||| ||||||||||||||||| |||||||||||||| |||
Sbjct 1535 GGAATGTATCTTCAAGGCCCGTCGAAGCTCGGGATTGGAGTAAGAAACGATGTTGCGAAA 1594
Query 1729 AGCAAGTACATTGTGGATTCAAGCCAAAGGTATGTGATT-GTAGCAGCTGAGTATTTAGG 1787
|||||||| || |||||||| || |||||||| || | |||||||| |||||||||||
Sbjct 1595 AGCAAGTATATGGTGGATTCTAGTCAAAGGTACA-GAATCGTAGCAGCAGAGTATTTAGG 1653
Query 1788 TAAAGGAGCTGTGAT-AGAGCCGTGCTGGTTACAGTATATGAGGGAATGGGGTCCGACCA 1846
||||||| || | ||| |||| |||| | |||| |||||| |||||||| || || |
Sbjct 1654 CGAAGGAGCGGTT-TCAGAACCGTACTGGCTGCAGTTTATGAGAGAATGGGGACCAACTA 1712
Query 1847 TTGCATATGATTCGGG-GTCTGAGATCAATAAGATCAT-GAATCTTCTTCCTTTGGTTGT 1904
| | ||||||||| | | ||||||||||||||||||| || ||| ||||| || || |
Sbjct 1713 TAGTATATGATTCAGCAG-CTGAGATCAATAAGATCATTGA-TCTACTTCCACTGATTCT 1770
Query 1905 TAGG--TTCTCTATTGAGAACATTGTTGATTTGTTTCCCATTGCTCTTTATGGAGAAGAA 1962
||| |||| | |||||| || | |||||| |||| ||||| || || |||
Sbjct 1771 GAGGAATTCT-T-TTGAGA-----GTC--T--GTTTCCTATTGAGCTTTACGGTGAGGAA 1819
Query 1963 GGTCCTACGGGGCCAAAGGAGAAAGATAACTGGGAAGGAGATGAGATGTGCTGAAA 2018
|||||||| || ||||||||||| ||||| |||||||||||||| || || |||||
Sbjct 1820 GGTCCTACAGGACCAAAGGAGAAGGATAATTGGGAAGGAGATGAAATTTGTTGAAA 1875
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110089795185
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5