BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477768 Length=1853 Score E Sequences producing significant alignments: (Bits) Value AT3G04930.1 | Symbols: | DNA-binding storekeeper protein-relat... 2567 0.0 > AT3G04930.1 | Symbols: | DNA-binding storekeeper protein-related transcriptional regulator | chr3:1362905-1364799 FORWARD LENGTH=1895 Length=1895 Score = 2567 bits (1390), Expect = 0.0 Identities = 1752/1911 (92%), Gaps = 87/1911 (5%) Strand=Plus/Plus Query 1 GAACACACCACCTTCTCTCCAATCTGGATCTGG-T--TCTTCTTCTTGGTCTATTCTTCA 57 ||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| || Sbjct 14 GAACACACCACCTTCTCTCCAATCTGGATCTGGTTCCTCTTCTTCTTGGTCTCTTCTCCA 73 Query 58 TCTCACCGTAGCTGATCTCGTATTGTTCTCCGTTCATTTGTTACGGTGGAGATGACATCG 117 ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 74 TCTCATCGGAGCTGATCTCGAATTGTTCTCCGTTCATTTGTTACGGTGGAGATGACATCG 133 Query 118 GATCACCGCGA--CTCTGCTT-TCTCT---A-TGGAATCGCCGGATCCGGAGGAAGGAGG 170 ||||||||||| |||| || ||||| | |||||||||| |||||||| |||||||| Sbjct 134 GATCACCGCGACGCTCT-TTTCTCTCTGGAACTGGAATCGCCTGATCCGGACGAAGGAGG 192 Query 171 TGTAGGAGACGGAGGAGAATCTGATACCGACGAGGATTTGCGTGACAACGATGATGTTGT 230 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 193 TGTAGCAGACGGAGGAGAATCTGATACCGACGAGGATTTGCGCGACAACGATGATGTTGT 252 Query 231 TATGCCGGAAACGAACGAAGCCGAAGCTGAAGACGACGATCCCGAAGAGGAAGATCTCAA 290 |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 253 TATGCCGGGAACGAACGAAGCTGAAGCTGAAGACGACGATCCCGAAGAGGAAGATCTCAA 312 Query 291 TTCTCCG---------TCACTCGCCATGGTTTCTACCATCTCGGCGACTGCGGTTGTTTC 341 ||||||| |||||| ||||||||||||| ||||| |||||||| |||||||| Sbjct 313 TTCTCCGTCTACATCATCACTCCCCATGGTTTCTACGATCTCAGCGACTGCTGTTGTTTC 372 Query 342 CGGGAAGCCGACGGCGACTCCCTCTACAGGCGCCGTGACTGTTGCTCTTCCGGCTGGATC 401 ||||| |||||||||||| ||||||||||||||||||| ||||| |||||||||||||| Sbjct 373 CGGGACCCCGACGGCGACTTCCTCTACAGGCGCCGTGACCGTTGCACTTCCGGCTGGATC 432 Query 402 CGCCGTCCCTGTCTCTGTGATTCCCGTTGATTCCGATCCGAAATGGCACCGTATGACGGA 461 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 433 CGCCGTCCCTGTCTCCGTGATTCCCGTTGATTCCGATCCGAAGTGGCACCGTATGACGGA 492 Query 462 GATCGTTCACCAGAGACCTCCGATCGATGATTCTAGACGCCTATTCCAGAGGCTGTGGAC 521 |||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 493 GATCGTCCATCAGAGACCACCGATCGATGATTCTAGACGCCTTTTCCAGAGGCTGTGGAC 552 Query 522 GGATGAAGACGAGATCGAGCTTCTCCGTGGTTTTCTCGATTACATGACGACGCACCGTGG 581 || |||||||||||||||||||| ||||||||||||||||||||||||| |||||| || Sbjct 553 AGACGAAGACGAGATCGAGCTTCTTCGTGGTTTTCTCGATTACATGACGATGCACCGCGG 612 Query 582 TAGCAGCTCGCATCCGCCGGATACGGCGCCGTTTTACGAGCAGATAAAGTCGAAACTTCA 641 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 613 AAGCAGCTCGCATCCGCCGGATACGGCGCCGTTTTATGAGCAGATAAAGTCGAAACTTCA 672 Query 642 GCTGGATTTCAACAAGAACCAGCTGGTGGAGAAGCTTCGGCGATTGAAGAAGAAGTACAG 701 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 673 GCTGGATTTCAACAAGAACCAGCTGGTGGAGAAGCTTCGGAGATTGAAGAAGAAGTACAG 732 Query 702 GAATGTGATGAGCAAGATCAGCTCTGGTAAAGAGGTATTCTTCAAGAGCCCTCATGATCA 761 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 733 GAATGTGATGAGCAAGATCAGCTCTGGTAAAGAGGTATTCTTCAAGAGCCCTCATGATCA 792 Query 762 GTCTACTTTCGAGATTTCTAGGAAAATCTGGAACCAAACTGGGAAAATCATAGGGTTTGA 821 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 793 GTCTACTTTCGAGATTTCTAGAAAAATCTGGAACCAAACTGGGAAAATCATAGGCTTTGA 852 Query 822 AGATAACAACGTAATGGATTTCGAAGAAACCAATAACCATCATAACACCA--A-TGGTAA 878 |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 853 AGATAACAACGTAATGGATTTCGAAGAAACCAATAACCATCATAACACCACCAATGGTAA 912 Query 879 CTACTCAACCTTTAACAGCCCTAGTTCTAATCCTACTCTGGAGCTCGATTCCGAAAACGG 938 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 913 CTACTCAACCTTTAACAGCCCTAGTTCTAATCCTACTCTGGAGCTCGACTCCGAAAATGG 972 Query 939 AGTCGAGAAGAAATTGACAATGAGTAGCAGTAGCGTGTCGAGAAAACGATCACGATCAAG 998 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 973 AATCGAGAAGAAATTGACAATGAGTAGCAGTAGCGTGTCGAGAAAACGATCACGATCAAG 1032 Query 999 AATTGGGAAGATTGAGGAAGACAACAAACCCGTCATCACTCCCTCTGATGGGCAGATACC 1058 |||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct 1033 AATTGGGAAGATTGAGGAAGACAACAAACCTGTCATCACTCCCTCTGATGGGC-----C- 1086 Query 1059 AAATGCAGCTAGCAATGTTAACCTCAACGAAACCGCAGCAGCTGTTGGTATTGGAGGAAA 1118 || | |||||||||||| |||||||||||| || ||||||||||||||||||||||| Sbjct 1087 AA-T--AGCTAGCAATGTCAACCTCAACGAA---GCTGCAGCTGTTGGTATTGGAGGAAA 1140 Query 1119 TCTCGGGGGTTTGATCGAAGAGACTGTGAAAAACTGCGTTTCTCCTGTGATCAAGGAGAT 1178 |||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct 1141 TCTCGGGGGTTTGATCGAAGAGACTGTGAAAAACTGTGTCTCTCCTGTGATCAAAGAGAT 1200 Query 1179 GATGAATGGGACAACAAGTATGATGATGGCTGCAATGGGAGGAGGGTTTCCAGGT---GG 1235 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 1201 GATGAATGGGACAACAAGTATGATGATGGCTGCAATGGGAGGAGGGTTTCCGGGTCTTGG 1260 Query 1236 TGGTGGTGGT---------------CATGGCTTTGGCTCGCTAAGCCCCATGTTTACACG 1280 |||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1261 TGGTGGTGGTGGTGGTGGTGGTGGTCATGGTTTTGGCTCGCTAAGCCCCATGTTTACACG 1320 Query 1281 GCCGCTCAATTTCGGTTTTGGTGTAGAAGGG-GGAGGAAACAAGGCGGTGGCAGATGAGC 1339 |||| |||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| Sbjct 1321 GCCGTTCAATTTCGGTTTTGGTGTAGA-GGGAGGAGGAAACAAGGCGGTTGCAGATGAGC 1379 Query 1340 GGTGGAGGAAACAACAGATTCTGGAGCTGGAAGTGTATTCAAGGAGATTAGAATTGGTTC 1399 ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct 1380 GGTGGAGGAAACAACAGATTCTGGAATTGGAAGTGTATTCAAGGAGATTAGAGTTGGTTC 1439 Query 1400 AAGAGCAGATTAGAACAACATTGAACGAGTTAAAGACGATGCCGAGTGGTGTATGATGAA 1459 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1440 AAGAGCAGATTAGAACGACATTGAACGAGTTAAAGACGATGCCGAGTGGTATATGATGAA 1499 Query 1460 GAGCAAGAAGAATAAGACAAGAAATAACCAGTTAGGTTGATATTTGATATCTCTGAATTA 1519 | || ||||||||||||||| || ||||| ||||||||||||||||||||| ||| ||| Sbjct 1500 GGGCGAGAAGAATAAGACAACAAGGAACCATTTAGGTTGATATTTGATATCTTTGAGTTA 1559 Query 1520 ACCTTCTGGTGTGTGGGTGAGTATAGTAAGAGATTTGAATCTTTTTTAAGTTATAAATTG 1579 ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 1560 ACCTTCTGGTGTGTGAGTGAGTATAGTAAGAGATTTGGATCTTTTT-AAGTTATAAATTG 1618 Query 1580 CTAAGGTATTGTGATCTTTCTCTAGGTTTT-----------GAttttttttt-tt-t-CT 1625 ||||||||||||||||||||||||||||| ||||||||||| || | || Sbjct 1619 GTAAGGTATTGTGATCTTTCTCTAGGTTTTTTCATCATTTTGATTTTTTTTTCTTCTTCT 1678 Query 1626 TATCTTTAAATTATTTGTCAATAGGGATGAATCATAGGTggggggggggggggTTTGTGT 1685 |||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct 1679 TATCTTTAAATTATTTGTCAATAGGGATGAATCATAGGAGGGGGG--------TTTGTGT 1730 Query 1686 ATAACCTTT-GTATTAGATTATAGtttttttttCGTAGAATCATTTGTTCAATAACAAAC 1744 ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1731 ATAACCTTTTGTATTAGATTATAGTTCTTTTTTCGTAGAATCATTTGTTCAATAACAAAC 1790 Query 1745 AAACAGACTT-CTAGCTGTTTATTCTCTCaaaaagaa-aaaaaTGAATAACTCTAAATTG 1802 | ||||| |||||||||| |||| |||||||||| |||||| ||||| ||||||||| Sbjct 1791 A----GACTTTCTAGCTGTTT-TTCTTTCAAAAAGAAGAAAAAT-AATAATTCTAAATTG 1844 Query 1803 TGTGCTAATCTTTCTCTGTCTAATAAAATCTGTAATAACATGTTTATTTCT 1853 ||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1845 TGTGCTACTCTTTCTTTGTCTAATAAAATCTGTAATAACATGTTTATTTCT 1895 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91716395715 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5