BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477778
Length=3459
Score E
Sequences producing significant alignments: (Bits) Value
AT3G04980.1 | Symbols: | DNAJ heat shock N-terminal domain-con... 5097 0.0
> AT3G04980.1 | Symbols: | DNAJ heat shock N-terminal domain-containing
protein | chr3:1378684-1382181 REVERSE LENGTH=3498
Length=3498
Score = 5097 bits (2760), Expect = 0.0
Identities = 3251/3486 (93%), Gaps = 42/3486 (1%)
Strand=Plus/Plus
Query 1 ATGGAGGCTGGTGATTTTGTTGGAGCTCA-AAAGTTTGTTACCAAGGCGCAAAGACTCTT 59
||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||
Sbjct 1 ATGGAGGCTGGTGATTTTGTTGGAGCTCATAAA-TTCGTTACCAAGGCGCAAAGACTCTT 59
Query 60 CCCCAATCTCGAAAACATAGTGCAGATGATAACCATATGTGATGTGCATTCTTCTGCAAT 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 60 CCCCAATCTCGAAAACATAGTGCAGATGATGACCATATGTGATGTGCATTCTTCTGCAAT 119
Query 120 TAAGAAAATCAAAGGGCTTGACGATTGGTATGGTGTCCTTCAGGTTCAGCCATTTGCTGA 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 120 TAAGAAAATCAAAGGGCTTGACGATTGGTATGGTGTCCTTCAGGTTCAGCCATATGCTGA 179
Query 180 TGCTGATACAATCAAGAAGCAATACAGAAAGCTTGCGCTGCTTCTCCATCCTGACAAAAA 239
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 180 TGCTGACACAATCAAGAAGCAATACAGAAAGCTTGCGCTGCTTCTCCATCCAGACAAAAA 239
Query 240 CAAGTTTGCTGGTGCAGAGGCTGCTTTCAAGTTGGTTGGGGAAGCAAACAGATTGCTTTC 299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 CAAGTTTGCTGGAGCAGAGGCTGCTTTCAAGTTGGTTGGGGAAGCAAACAGATTGCTTTC 299
Query 300 TGATCAGATAAAACGTTCTCAGTATGATAACAGATACAGATCCCATTCAATGCTTGCTAA 359
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 300 TGATCAGATCAAACGTTCTCAGTATGATAACAGATACAGATCCCATTCAATGTTTGCTAA 359
Query 360 CAAGCATGTGCATGCATACTCGGGTCGCCACTGTGAAGCTACAAACAGTGATGCGGAGAA 419
|| ||||||| ||| |||||||||||||||||||| ||||||||||| || |||||||||
Sbjct 360 CAGGCATGTGAATGTATACTCGGGTCGCCACTGTGCAGCTACAAACAATGCTGCGGAGAA 419
Query 420 TATTGCAAGTGTTTACACATTCTGGACACGTTGCAGGCACTGTGGCCAGTGGTATAAATA 479
|||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 420 TATTGCTGGTGTTTTCACATTCTGGACACGTTGCAGGCACTGTGGCCAGTGTTATAAATA 479
Query 480 CCTGAGAGAATATATGAATACAGT-TATGTACTGTTCCAGTTGCCGGAAATCTTATGTCG 538
| |||||||||||||||| || | |||| ||||||||||||||| |||||||| |||||
Sbjct 480 CTTGAGAGAATATATGAACAC-TTCTATGCACTGTTCCAGTTGCCAGAAATCTTTTGTCG 538
Query 539 CCTGCAACATGAGGTGTGATGGAGTGCCACCTAGTAGTTCAACTGCTGGTAGAAAGGAAT 598
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 539 CCTGCAAAATGAGGTGTGATGGAGTGCCACCTAGTAGTTCAACCGCTGGTAGAAAAGAAT 598
Query 599 TTCAATATCAAGGGATGTATAATACATCTCGGCAAAATGCTTCTACAGGAGCAGAATCAG 658
| ||| |||||| ||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 599 TCCAAGATCAAGTGATGTCTAATACATCTCGGCAAAATGCTTCTACAGCAGCAGAATCAG 658
Query 659 GCGGTTCAGCAGCTGAGATGGGTAAGAATGGGACAGCT-GGagaaaaactcaacaagaag 717
|| | ||||||||||| |||||||||||||||| || | |||| ||| |||||||||||
Sbjct 659 GCAGCTCAGCAGCTGATATGGGTAAGAATGGGAAAG-TCGGAGGGAAAGTCAACAAGAAG 717
Query 718 aatcaagaaaaacagaaaaaagGTGCTGCTAACA-GGGAACCCAAGAAAGATGAGGGTTG 776
|||||||||||||||||||| ||||||| ||||| ||||| | |||||||| || |||||
Sbjct 718 AATCAAGAAAAACAGAAAAATGGTGCTGTTAACAGGGGAA-CTAAGAAAGAAGAAGGTTG 776
Query 777 TACAGAGAATGACGCTGAAGGAAGAACCCCCCAGAATAGTGAGACAGCG-ACGAATAATT 835
|||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||| ||
Sbjct 777 TACAGAGAATGACGCTGAAGGAAGAAAACCCCAGACTAGTGAGACAG-GTACGAATATTT 835
Query 836 CTGCTGAAATACCTAAGGCTGATGTATTGAAGCCGCAGCATCAGGT-aaa-aa-aaCCAC 892
|||||||||| ||||| |||||||||||||||||||| ||||| || ||| || |||||
Sbjct 836 CTGCTGAAATGCCTAAAGCTGATGTATTGAAGCCGCAACATCAAGTAAAAGAAGAACCAG 895
Query 893 ATACTAGTGCAGCAAAGTCAATACCTGATTTATCAGCTCCAAAGAAGAATCAGACAGCCA 952
|||||||||||| |||||||||||||||||||||||||||| ||||||||| | || |||
Sbjct 896 ATACTAGTGCAGAAAAGTCAATACCTGATTTATCAGCTCCACAGAAGAATCGGGCACCCA 955
Query 953 AAAAGAAGAGAAAAGCTGTCGAGGAATCCTCTAAGAGTTTTGAAGTTGATAG--C---T- 1006
|||||||||| |||| ||| || |||||||||||||||||||| |||||||| | |
Sbjct 956 AAAAGAAGAGGAAAGTTGTTGAAGAATCCTCTAAGAGTTTTGAGGTTGATAGCTCTGATA 1015
Query 1007 CTGCTGGGGCTAAAACAGATACATATGAATATAATAAGAGGAAGTCATCGAGGAAAAAGC 1066
||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct 1016 CTGCTGGGGCTAAAACAGATACAAATGAACATAATAAGAGGAAGTCATCAAGGAAAAAGC 1075
Query 1067 CACAGGTTTTTTGCTCAAAGGGGGGAAGCGATGGTGATTGTGTCAGCCCTCCAAATAAAA 1126
||||||||| || | |||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1076 CACAGGTTTCTTACGCAAAGGAGGGAAGCGATGGTGATTTTGTCAGCCCTCCAAATAAAA 1135
Query 1127 AGACAAAATCAGCTTGTGAATTTGAGTCTGAGTTTAATACGAAGCAAACTGCTGAGGATA 1186
|||||||||||| || |||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct 1136 AGACAAAATCAGGTTTTGAATTTGAGTCTGAGCCTAATAAGAAGCAAACGGCTGAGGATA 1195
Query 1187 ATCAGTCATCTGAACTGGCTGATTCTGGTGTTTCTTCTGCTTCTTCACATGCTTATAAAG 1246
|| ||||| || ||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1196 ATAAGTCACCTAAACTGGCTGTTTCTGGTGTTTCTTCTGCTTCTTCACATTCTTATAAAG 1255
Query 1247 GAAAGGCCAAGAAAAATGAGCATTCTGGAAATGAAGACATCTTGTCATG-CAAAAACAAA 1305
|||||||||||||||||| |||||||||||||||||||| ||||||| | ||||||||||
Sbjct 1256 GAAAGGCCAAGAAAAATGCGCATTCTGGAAATGAAGACAACTTGTCA-GCCAAAAACAAA 1314
Query 1306 GTTAGTGAAGGCTGTGATGGTAATGGAGAAGATGCAGCCTTGTTGAGCAAGATTGGTAGA 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 GTTAGTGAAGGCTGTGATGGTAATGGAGAAGATGCAGCCTTGTTGAGCAAGATTGGTAGA 1374
Query 1366 GTTGAAAAAGGATACAAAGCTAATGAAAAT-CATAATCCGCTTGATGTACCTGATCTAGA 1424
|||||||||||||||||||||||||||||| | ||||||||||||| |||||||| ||||
Sbjct 1375 GTTGAAAAAGGATACAAAGCTAATGAAAATTC-TAATCCGCTTGATATACCTGATTTAGA 1433
Query 1425 GTTCAGTGTGTTTGATGTTGAATGGAAAACAGAAGATTTTGCTGTCAATCAAGTGTGGTC 1484
||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1434 GTTCAGTGTGTTTAAAGTTGAACGGAAAACAGAAGATTTTGCTGTCAATCAAGTGTGGTC 1493
Query 1485 TACTACAACTGATTCTAGAGATGGTATGCCTAGGAAATATGCTCAGATAAAGAATGTGCT 1544
|||||||||||||| ||||||||||||||||||||||||||||| | ||||||| || ||
Sbjct 1494 TACTACAACTGATTGTAGAGATGGTATGCCTAGGAAATATGCTCGGGTAAAGAAAGTACT 1553
Query 1545 GAATGGCGAGTTCAAGCTGCGGATTACCTACCTTGATCCTGTACTGGGTAATAATGATGA 1604
|||||||||||||||||||||||| |||||||||||||||||||||| ||| | ||||||
Sbjct 1554 GAATGGCGAGTTCAAGCTGCGGATCACCTACCTTGATCCTGTACTGGATAAGACTGATGA 1613
Query 1605 AAGTATTCCAGTTGCTTGTGGAAAGTTCAAATATGGGACAACAAAGGAAGTTGAGGACCG 1664
||||||||||||||||||||||||||||||| |||||| ||||| ||||||| | ||| |
Sbjct 1614 AAGTATTCCAGTTGCTTGTGGAAAGTTCAAAAATGGGAAAACAATGGAAGTTAAAGACAG 1673
Query 1665 CTCAATCTTTTCAGGTCAAATGCATAACTTGCATTGCAACGAA-ATTGTTTCCATCTATC 1723
||||||||||||||||||||||||| |||||| ||||||| || |||||||||||||| |
Sbjct 1674 CTCAATCTTTTCAGGTCAAATGCATCACTTGCGTTGCAAC-AATATTGTTTCCATCTACC 1732
Query 1724 CAAGGAAAGGGGAAATATGGGCTATTTTCAGAGAATGGAATGCGGAATGGAACACTAGTC 1783
||||||||||||||||||||||||| |||||||| ||| | | |||||||||||||||||
Sbjct 1733 CAAGGAAAGGGGAAATATGGGCTATATTCAGAGAGTGGGAGGAGGAATGGAACACTAGTC 1792
Query 1784 TAAAAAAGCATAAATTACCATATAAGTATGACTTTGTGGAAATTGTCAGTGATTTTCATG 1843
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1793 TAAAAAAGCATAAATTTCCATATAAGTATGACTTTGTGGAAATTGTCAGTGATTTTCATG 1852
Query 1844 ATCTTAACGGTGTTGGAGTGGCCTATCTGGGAAAACTTAAAGGGTCTGTTCAGCTATTTC 1903
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1853 ATCTTAACGGGGTTGGAGTGGCCTATCTGGGAAAACTTAAAGGGTCTGTTCAGCTATTTC 1912
Query 1904 ACTGGGAGGCGCAGAATGGAATTTGCCAGATTCAATTTACTCCGAAAGATATGCTTAGAT 1963
|||||||| ||||| ||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1913 ACTGGGAGCCGCAGCATGGAATTTGCCAGATTCAATGTAGTCCGAAAGATATGCTTAGAT 1972
Query 1964 TTTCTCACAAAGTACCAGCAGTCAAAATTACTGGAAAAGAGAAAGAATCTGTTCCACCTA 2023
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1973 TTTCTCACAAAGTACCAGCAGTCAAAATGACTGGAAAAGAGAAAGAATCTGTTCCACCTA 2032
Query 2024 ACTCATATGAACTGGATCCTGCTGCATTACCAAAAGATATATTTCAGTTT-AGTGCGGTT 2082
||||||||||| ||||||||||||| ||||||||||||||||||||| || | |||||||
Sbjct 2033 ACTCATATGAATTGGATCCTGCTGCCTTACCAAAAGATATATTTCAGGTTGA-TGCGGTT 2091
Query 2083 GATATGGAGATGGATAGCGAGATCATGAAAGGTAAAGCGGACGGCCCTTATAAGGTTGGA 2142
||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||
Sbjct 2092 GATATGGAGATGGATAGTGAGATCCTGAAAGGTAAAGCTGACGGCCCTTATAAGGTTGGA 2151
Query 2143 TCAAAGGCCAAGCCAGTTCCAGAGACCGCACCATCTCCAAGGAAACGTC-GAAAATCTGA 2201
| ||||||||| |||||| |||||||||| |||||||||||||||||| |||| |||||
Sbjct 2152 GCGAAGGCCAAGGCAGTTCAAGAGACCGCATCATCTCCAAGGAAACGTCAGAAA-TCTGA 2210
Query 2202 TGATGATAATG--G-TG-T--ATGCAGTAATCTTGGGGAAGTCATAGGCGGAAGCAACAG 2255
||||||||||| | || | |||||||||||||||||||||||||||||||||||||||
Sbjct 2211 TGATGATAATGATGATGGTGTATGCAGTAATCTTGGGGAAGTCATAGGCGGAAGCAACAG 2270
Query 2256 AAGCCATATTTTTTCTTCTTCTGAAGTTGATGAAAAGAACACACCAACCAAGTCCAGAAA 2315
||| |||||||||||||||| |||||||||||| ||||||||| ||||||| ||||||||
Sbjct 2271 AAGTCATATTTTTTCTTCTTGTGAAGTTGATGATAAGAACACATCAACCAAATCCAGAAA 2330
Query 2316 GGATGCTGAGGCCACAGATGTTTTCAAACTTCGAAAATCTCCTCGTCTTCAAACAATTCC 2375
||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2331 GGATGGTGAGTCCACAGATGTTTTCAGACTTCGAAAATCTCCTCGTCTTCAAACAATTCC 2390
Query 2376 AAGCCAACAAGGAGATGAGAAGAAATGTGTTAAACAAGGCAACAAGATGAATATCCCAAA 2435
|| ||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||
Sbjct 2391 AAACCACCAAGGAGATGAGAAGAAAAGTGCTAAACAAGGCAACAAGATGAATACCCCAAA 2450
Query 2436 GAAAATGGATAAGGGTCTTGTGACAGATTCTTTGGGAGTTGATGAAAAGAACACACCAAA 2495
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||
Sbjct 2451 GAAAATGGATAAGGGTCTTGTGACAGATTCTTTGGGTGTTGATGAAAAGAAAACATCAAA 2510
Query 2496 CAAGTCCAGAAAGAATGGTGAGGCCACAGATGTTTTCAAACTTCGAAAATCTCCTCGTCT 2555
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2511 ---GTCCAGAAAGAATGGTGAGGCCACAGATGTATTCAAACTTCGAAAATCTCCTCGTCT 2567
Query 2556 TCAAACAATTCCAAGCCAACAAGGAGATGAGATGAAAAGTGCTAAACAAGGCAATAAGAT 2615
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 2568 TCAAACAATTCCAAGCCAACAAGGAGATGAGATGAAAAGTACTAAACAAGGCAATAAAAT 2627
Query 2616 GAATACCCCaaaaaaaaCTGATAAGGGTCTTGTGACAGATTCTTTGGGAGTCGGAAAATC 2675
||||||||| || ||||||||||| ||||||| ||||||||||||||||||| |||||||
Sbjct 2628 GAATACCCCGAAGAAAACTGATAAAGGTCTTGAGACAGATTCTTTGGGAGTCAGAAAATC 2687
Query 2676 TCCCAATGGCATTCACCAACCAGCAGAGAGTCAGGAAGGAGAGAGCTCGAAGAAACAAGG 2735
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2688 TCCCAATGGCATTCACCAACCAGCAGAGAGTCAGGAAGGAGAGAGCTCAAAGAAACAAGG 2747
Query 2736 ATGCAATGGTGAAATACCGTCTCTGTCCAAGCAGAATGATTTGCCAACTCAGTTGGGTGG 2795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2748 ATGCAATGGTGAAATACCGTCTCTGTCCAAGCAGAATGATTTGCCAACTCAGTTGGGTGG 2807
Query 2796 TTCTATGTATGAGTCCCCTAATACAACTCATGTGTCACCAAATTGCAAAACACCTCGAAG 2855
||||| |||| |||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 2808 TTCTACGTATAAGTCCCCTCGTACAACTCATGTGTCACCACATTGCAAAACACCTCGAAG 2867
Query 2856 AAATGCCTCTGACTTCAAGAACCTGAGATCTGAAGACAAATTCGGAA-TTGATCAGATAT 2914
|||||||| ||||||| ||||||||||||||||||||||||||| || || |||||||||
Sbjct 2868 AAATGCCTTTGACTTCCAGAACCTGAGATCTGAAGACAAATTCG-AAGTTAATCAGATAT 2926
Query 2915 GGGCTATTTATAGAAATGACAATCGAATGCCCTCAGAGTATGTCAAGATCAAGAAAATTG 2974
||||||| ||||| ||||||||| ||||||||| ||||||||| ||||||||||||||||
Sbjct 2927 GGGCTATCTATAGCAATGACAATGGAATGCCCTTAGAGTATGTGAAGATCAAGAAAATTG 2986
Query 2975 AAACCAAGCCTAAGTTCGTGATACGTGGAACCCCGACAGAGCTGTATCCGCCATCTACAG 3034
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2987 AAACCAAGCCTAAGTTTGTGCTACGTGGAACCCCGACAGAGCTGTATCCGCCATCTACAG 3046
Query 3035 AACCCGTGACCCGCACAGTGTCTTGTGGGGAATTCAAGTTGCTCAAAGGAAGACCCAAAA 3094
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3047 AACCTGTGACCCGCACAGTGTCTTGTGGGGAATTCAAGTTGCTCAAAGGAAGACCCAAAA 3106
Query 3095 TCTTTCCTCATGCGAGCTTCTCACATCAGGTCAAACCCTTCGACAGTAGTAAGAAGTTTA 3154
|| |||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |
Sbjct 3107 TCATTCCTCATGCGAGCTTCTCACATCTGGTCAAACCCTTTGACAGTAGTAAGAGGTTCA 3166
Query 3155 TAGTCAAAGTATACCCAAGGAAAGGTGACATATGGGCTCTGTATAAGAACTGTGATAGCA 3214
| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 3167 GATTCAAAGTATACCCAAGGAAAGGTGAGATATGGGCCCTGTATAAGAACTGTGATAGCA 3226
Query 3215 CCGAAGAACATGACATTGTAGAAGTGGTGGAAGATAACTGTGATGGGGAGATCGTAAAGG 3274
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3227 CTGAAGAACCTGACATTGTAGAAGTGGTGGAAGATAACTGTGATGGGGAGATCGTAAAGG 3286
Query 3275 TGGTGGCTTTGACTGCTGTAGGCTCTAGTTTTCAGAGGAAACAAGGGTCGAATGTGGGTT 3334
||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||
Sbjct 3287 TGGTGGCTTTGACTGCTATGGGCTCTAGTTTTCAGAGGAAACAAGGGTCGGATGTGGGTT 3346
Query 3335 TAATAGACATTCCAAAGGCAGAAATGAGTAGATTTTCTCATCAGATTCCGGCTATCAGAC 3394
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3347 TAATTGACATTTCAAAGGCAGAAATGAGTAGATTTTCTCATCAGATTCCGGCTATCAGAC 3406
Query 3395 AGCCCAA-GAGGGCAACCAGGTTAGTTGAAGGAGGATACTACTGGGAGCTTGACCCTATA 3453
| ||||| || | |||| ||| ||||| ||||||||||||||||||| ||||||||||||
Sbjct 3407 A-CCCAAAGAAGACAACAAGGCTAGTTAAAGGAGGATACTACTGGGAACTTGACCCTATA 3465
Query 3454 GCAATT 3459
||||||
Sbjct 3466 GCAATT 3471
Score = 278 bits (150), Expect = 3e-73
Identities = 179/193 (93%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 2472 AGTTGATGAAAAGAACACACCAAACAAGTCCAGAAAGAATGGTGAGGCCACAGATGTTTT 2531
||||||||| ||||||||| ||| ||| ||||||||| |||||||| |||||||||||||
Sbjct 2295 AGTTGATGATAAGAACACATCAACCAAATCCAGAAAGGATGGTGAGTCCACAGATGTTTT 2354
Query 2532 CAAACTTCGAAAATCTCCTCGTCTTCAAACAATTCCAAGCCAACAAGGAGATGAGATGAA 2591
|| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||
Sbjct 2355 CAGACTTCGAAAATCTCCTCGTCTTCAAACAATTCCAAACCACCAAGGAGATGAGAAGAA 2414
Query 2592 AAGTGCTAAACAAGGCAATAAGATGAATACCCCaaaaaaaaCTG-ATAAGGGTCTTGTGA 2650
|||||||||||||||||| ||||||||||||||||| |||| || |||||||||||||||
Sbjct 2415 AAGTGCTAAACAAGGCAACAAGATGAATACCCCAAAGAAAA-TGGATAAGGGTCTTGTGA 2473
Query 2651 CAGATTCTTTGGG 2663
|||||||||||||
Sbjct 2474 CAGATTCTTTGGG 2486
Score = 244 bits (132), Expect = 3e-63
Identities = 175/195 (90%), Gaps = 5/195 (3%)
Strand=Plus/Plus
Query 2281 GTTGATGAAAAGAACACACCAACCAAGTCCAGAAAGGATGCTGAGGCCACAGATGTTTTC 2340
|||||||||||||| | | || | |||||||||||| ||| ||||||||||||||| |||
Sbjct 2488 GTTGATGAAAAGAA-A-A-CATCAAAGTCCAGAAAGAATGGTGAGGCCACAGATGTATTC 2544
Query 2341 AAACTTCGAAAATCTCCTCGTCTTCAAACAATTCCAAGCCAACAAGGAGATGAGAAGAAA 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2545 AAACTTCGAAAATCTCCTCGTCTTCAAACAATTCCAAGCCAACAAGGAGATGAGATGAAA 2604
Query 2401 TGTGTTAAACAAGGCAACAAGATGAATATCCCAAAGAAAA-TGGATAAGGGTCTTGTGAC 2459
|| |||||||||||| || ||||||| ||| ||||||| || |||| ||||||| |||
Sbjct 2605 AGTACTAAACAAGGCAATAAAATGAATACCCCGAAGAAAACTG-ATAAAGGTCTTGAGAC 2663
Query 2460 AGATTCTTTGGGAGT 2474
|||||||||||||||
Sbjct 2664 AGATTCTTTGGGAGT 2678
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 172172948376
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5