BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477795
Length=1666
Score E
Sequences producing significant alignments: (Bits) Value
AT3G05120.1 | Symbols: ATGID1A, GID1A | alpha/beta-Hydrolases s... 2459 0.0
AT5G27320.1 | Symbols: ATGID1C, GID1C | alpha/beta-Hydrolases s... 933 0.0
> AT3G05120.1 | Symbols: ATGID1A, GID1A | alpha/beta-Hydrolases
superfamily protein | chr3:1430471-1432778 FORWARD LENGTH=1740
Length=1740
Score = 2459 bits (1331), Expect = 0.0
Identities = 1550/1651 (94%), Gaps = 34/1651 (2%)
Strand=Plus/Plus
Query 1 ATTAAACCCCATTTTGATCTCTCAAG-TTTTCAAAAGCAGGAGATTTTCCTTTT-CCAGA 58
|||||||||||||||||||||| || |||| |||||||||||||||||||||| |||||
Sbjct 19 ATTAAACCCCATTTTGATCTCT--AGTTTTTTAAAAGCAGGAGATTTTCCTTTTCCCAGA 76
Query 59 AAGAGAAATTTCACTAATCAAAGTTTCTAGCTTTCACTTATCGACTTGAAAATTCTCGTC 118
|| ||||||||| | |||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct 77 AA-AGAAATTTCCCAAATCAAAGTTTCGAGCTTTCACTTCTCGACTTGCAAATTCTCGTC 135
Query 119 CTTTTTACTGAATTCGATCTGGGTTTTTGTTTTTGATTAGTAAAATAAC-------AAAA 171
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 136 CTTTTTACTGAATTCGATCTGGGTTTTTGTTTTTGATTAGTAAAATAACAAAAAAAAAAA 195
Query 172 GGGGGGTTT-TCAGAAATGGCTGCGAGCGATGAAGTTAATCTTATTGAGAGCAGAACAGT 230
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 196 AAAGGATTTATCAGAAATGGCTGCGAGCGATGAAGTTAATCTTATTGAGAGCAGAACAGT 255
Query 231 GGTTCCTCTCAATACATGGGTTCTAATATCCAACTTCAAAGTAGCCTACAATATCCTGCG 290
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 256 GGTTCCTCTCAATACATGGGTTTTAATATCCAACTTCAAAGTAGCCTACAATATCCTTCG 315
Query 291 TCGCCCCGATGGAACCTTTAACCGACACTTAGCTGAGTATCTAGACCGTAAAGTCACTGC 350
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 316 TCGCCCTGATGGAACCTTTAACCGACACTTAGCTGAGTATCTAGACCGTAAAGTCACTGC 375
Query 351 AAACGCCAATCCTGTGGATGGGGTGTTCTCGTTCGATGTCTTGATTGATCGTAGAATCAA 410
|||||||||||| || |||||||| |||||||||||||||||||||||||| || |||||
Sbjct 376 AAACGCCAATCCGGTTGATGGGGTTTTCTCGTTCGATGTCTTGATTGATCGCAGGATCAA 435
Query 411 TCTTCTAAGTAGAGTCTATAGACCAGCTTATGCAGATCAAGAGCAACCTCCTAGTGTTTT 470
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 436 TCTTCTAAGCAGAGTCTATAGACCAGCTTATGCAGATCAAGAGCAACCTCCTAGTATTTT 495
Query 471 AGATCTCGAGAAGCCTGTTGATGGCGACATTGTCCCTGTTATATTGTTCTTCCATGGAGG 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 AGATCTCGAGAAGCCTGTTGATGGCGACATTGTCCCTGTTATATTGTTCTTCCATGGAGG 555
Query 531 TAGCTTTGCTCATTCTTCTGCAAACAGTGCCATCTACGATACTCTTTGTCGCAGGCTTGT 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 TAGCTTTGCTCATTCTTCTGCAAACAGTGCCATCTACGATACTCTTTGTCGCAGGCTTGT 615
Query 591 TGGTTTGTGCAAGTGTGTTGTTGTCTCTGTGAACTATCGGCGTGCACCCGAGAATCCATA 650
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 616 TGGTTTGTGCAAGTGTGTTGTTGTCTCTGTGAATTATCGGCGTGCACCAGAGAATCCATA 675
Query 651 CCCTTGTGCTTATGATGATGGTTGGATTGCTCTTAATTGGGTTAACTCAAGAGCTTGGCT 710
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 676 CCCTTGTGCTTATGATGATGGTTGGATTGCTCTTAATTGGGTTAACTCGAGATCTTGGCT 735
Query 711 TAAATCCAAGAAAGACTCAAAGGTTCATATATTCCTGGCGGGGGATAGCTCGGGAGGTAA 770
|||||||||||||||||||||||| ||||| ||| |||| || |||||||| ||||||||
Sbjct 736 TAAATCCAAGAAAGACTCAAAGGTCCATATTTTCTTGGCTGGTGATAGCTCTGGAGGTAA 795
Query 771 CATTGCGCATAATGTAGCGCTAAAAGCGGGTGAATCAGGAATCGATGTTTTGGGGAACAT 830
||| ||||||||||| || ||| |||||||||||| |||||||||||||||||||||||
Sbjct 796 CATCGCGCATAATGTGGCTTTAAGAGCGGGTGAATCGGGAATCGATGTTTTGGGGAACAT 855
Query 831 TCTGCTGAATCCTATGTTTGGTGGGAATGAGAGGACGGAGTCTGAGAAAAGTTTGGATGG 890
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 856 TCTGCTGAATCCTATGTTTGGTGGGAATGAGAGAACGGAGTCTGAGAAAAGTTTGGATGG 915
Query 891 GAAATACTTTGTGACAGTTAGAGACCGCGATTGGTATTGGAAAGC-TTTTCTACCTGAGG 949
||||||||||||||| |||||||||||||||||||| |||||||| |||| |||| ||||
Sbjct 916 GAAATACTTTGTGACGGTTAGAGACCGCGATTGGTACTGGAAAGCGTTTT-TACCCGAGG 974
Query 950 GAGAAGATAGAGAGCATCCAGCGTGTAATCCGTTTAGCCCAAGAGCGAAAAGCTTAGAAG 1009
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 975 GAGAAGATAGAGAGCATCCAGCGTGTAATCCGTTTAGCCCGAGAGGGAAAAGCTTAGAAG 1034
Query 1010 GATTGAGTTTCCCCAAGAGTCTTGTGGTTGTCGCAGGTTTGGATTTGATTCGAGATTGGC 1069
|| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 1035 GAGTGAGTTTCCCCAAGAGTCTTGTGGTTGTCGCGGGTTTGGATTTGATTAGAGATTGGC 1094
Query 1070 AGTTGGCTTACGCGGAAGGGCTCAAGAAAGCGGGTCAAGAGGTAAAGCTTATGCATTTAG 1129
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1095 AGTTGGCATACGCGGAAGGGCTCAAGAAAGCGGGTCAAGAGGTTAAGCTTATGCATTTAG 1154
Query 1130 AGAAAGCAACTGTTGGGTTTTACCTCTTGCCTAATAACAATCATTTCCATAATGTTATGG 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155 AGAAAGCAACTGTTGGGTTTTACCTCTTGCCTAATAACAATCATTTCCATAATGTTATGG 1214
Query 1190 ATGAGATTTCTGCGTTTGTAAACG---AACGTTAACAC-GGTGTTAGAGAAAGAAGGTTG 1245
|||||||||| ||||||||||||| || |||||||| || ||||||||||||||||||
Sbjct 1215 ATGAGATTTCGGCGTTTGTAAACGCGGAATGTTAACACTGG-GTTAGAGAAAGAAGGTTG 1273
Query 1246 TTTTAACAGAGCCAAGACATCTTTCAAACTAACAAACAGGTGAATGTATTGCCTGTGGAT 1305
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1274 TTTTAACAAAGCCAAGACATCTTTCAAACTAACACACAGGTGAATGTATTGCCTGTGGAT 1333
Query 1306 TCTCTCGGTTAGTTTTGTTTTTGTGTTTAGTATCTAAGTGTGTGGCGGTTTGCGGCAGCC 1365
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1334 TCTCTCGTTTAGTTTTGTTTTTGTGTTTAGTATCTAAGTGTGTGGCGGTCTGCGGCAGCC 1393
Query 1366 TTTGTGATGACTGTTTAAACGCTGGATTCTGAAACGCTAAAGCTTGTGGAAGAATAGTGA 1425
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1394 TTTGTGATGACTGTTTAAACGCTGGATTCTGAAACGCTAAAGCTTGTGGAAGAACAGTGA 1453
Query 1426 GGCGTTTAGAGACTTGGAAAGGAACAAAGCAGTAGTAAAAATTTCTCCTTTGT--GTCTG 1483
||||||||||||||||||||||||| ||||| ||||||||||||||||||| | |||||
Sbjct 1454 GGCGTTTAGAGACTTGGAAAGGAACCAAGCACTAGTAAAAATTTCTCCTTTTTTTGTCTG 1513
Query 1484 TAATATTTGGCCTTTAGCTTTTAGCCTTGAGtttttttATTAACTAAAAGCTGAATTTTT 1543
||||||||||| ||||||||||| ||||||| |||||| |||||||||||||| |||||
Sbjct 1514 TAATATTTGGCATTTAGCTTTTACCCTTGAGCCTTTTTACTAACTAAAAGCTGA-TTTTT 1572
Query 1544 TCAGCGTGGGAGTGGTAATTA-A-AT--ATAAATAT-T-T----CAAGAATGTAATGTTT 1593
||||| || |||||||||||| | || |||||||| | | ||||||||||||||||
Sbjct 1573 TCAGCATGAGAGTGGTAATTAGATATCTATAAATATATATATTTCAAGAATGTAATGTTT 1632
Query 1594 -TATACAAATTGTAATGATTTTGGTAAATGT 1623
|| ||||||| || ||||||||||||||||
Sbjct 1633 ATACACAAATTTTAGTGATTTTGGTAAATGT 1663
> AT5G27320.1 | Symbols: ATGID1C, GID1C | alpha/beta-Hydrolases
superfamily protein | chr5:9629087-9631210 FORWARD LENGTH=1666
Length=1666
Score = 933 bits (505), Expect = 0.0
Identities = 872/1045 (83%), Gaps = 42/1045 (4%)
Strand=Plus/Plus
Query 187 ATGGCTGCG-AGCGATGAAGTTAATCTTATTGAGAGC-AGAACAGTGGTTCCTCTCAATA 244
||||||| | || || ||||||||||||||||||||| || |||||||||||||||||||
Sbjct 168 ATGGCTG-GAAGTGAAGAAGTTAATCTTATTGAGAGCAAG-ACAGTGGTTCCTCTCAATA 225
Query 245 CATGGGTTCTAATATCCAACTTCAAAG-TAGCCTACAATATCCTGCGTCGCCCCGATGGA 303
|||||||||||||||||||||| ||| |||| |||||| ||||||||||||| || |||
Sbjct 226 CATGGGTTCTAATATCCAACTT-TAAGCTAGCTTACAATCTCCTGCGTCGCCCTGACGGA 284
Query 304 ACCTTTAACCGACACT-TAGCTGAGTATCTAGACCGTAAAGTCACTGCAAACGCCAATCC 362
|| |||||||| || | | || |||| ||||||||| |||||| ||||||| ||||| ||
Sbjct 285 ACTTTTAACCGTCA-TCTCGCAGAGTTTCTAGACCGGAAAGTCCCTGCAAATGCCAACCC 343
Query 363 TGTGGATGGGGTGTTCTCGTTCGATGTCTTGATTGATCGTAGAATC-AATCTT-CTAAGT 420
||| ||||||| ||||| || ||||| | || ||||| || | ||| || || ||
Sbjct 344 TGTTAATGGGGTCTTCTCTTTTGATGTGATCATCGATCG-CCAAACTAAT-TTGCTTAGC 401
Query 421 AGAGTCTATAGACCAGCTTATGCAGATCAAGAGCAAC--CTCCTAGTGTT-TTAGATCT- 476
||||| || ||||||||| |||| | | || || | || ||| || | |||||
Sbjct 402 AGAGTTTACAGACCAGCTGATGC---T---G-GC-ACTTCACCAAGTATTACT-GATCTA 452
Query 477 CGAGAAGCCTGTTGATGGCGACATTGTCCCTGTTATAT-TGTTCTTCCATGGAGGTAGCT 535
| |||| ||||||||||| || || || |||||||| | | ||||| ||||| || ||||
Sbjct 453 C-AGAATCCTGTTGATGGTGAAATAGTGCCTGTTAT-TGTCTTCTTTCATGGTGGAAGCT 510
Query 536 TTGCTCATTCTTCTGCAAACAGTGCCATCTACGATACTCTTTGTCGCAGGCTTGTTGGTT 595
|||| |||||||||||||||||||| || || |||||||||||||| |||||||||||||
Sbjct 511 TTGCACATTCTTCTGCAAACAGTGCTATTTATGATACTCTTTGTCGTAGGCTTGTTGGTT 570
Query 596 TGTGCAAGTG-TGTTGTTGTCTCTGTGAACTATCGGCGTGCACCCGAGAATCCATACCCT 654
|||| ||| |||||||||||||||||| ||||| |||||||| ||||||| |||||||
Sbjct 571 TGTG-TGGTGCTGTTGTTGTCTCTGTGAATTATCGTCGTGCACCAGAGAATCGATACCCT 629
Query 655 TGTGCTTATGATGATGGTTGGATTGCTCTT-AATTGGGTTAACTCAAGAGCTTGGCTTA- 712
||||||||||||||||| ||| || | || || ||||| ||||| || |||||||||
Sbjct 630 TGTGCTTATGATGATGGATGGGCTG-TTTTGAAATGGGTCAACTCGAGTTCTTGGCTTAG 688
Query 713 AATCCAAGAAAGACTCAAAGGTTCATATATTCCTGGCGGGGGATAGCTC-GGGAGGTAAC 771
|| |||||||||||||||||||| ||| ||| ||||||| |||||||| ||| ||||||
Sbjct 689 AA-GCAAGAAAGACTCAAAGGTTCGTATTTTCTTGGCGGGTGATAGCTCTGGG-GGTAAC 746
Query 772 ATTGCGCATAATGTAGCGCTAAAAGCGGGTGAATC-AGGAATCGATGTTTTGGGGAACAT 830
|||| ||||||||| ||| ||| ||||| ||| || ||| ||||||||||||||||||||
Sbjct 747 ATTGTGCATAATGTCGCGGTAAGAGCGGTTGAGTCAAGG-ATCGATGTTTTGGGGAACAT 805
Query 831 TCTGCTGAATCCTATGTTTGGTGGGAATGAGAGGACGGAGTCTGAGAAAAGTTTGGATGG 890
| |||| || ||||||||||| |||| || || ||||| ||||||||| ||||||||||
Sbjct 806 TTTGCTTAACCCTATGTTTGGAGGGACCGAAAGAACGGAATCTGAGAAACGTTTGGATGG 865
Query 891 GAAATACTTTGTGACAGTTAGAGACCGCGATTGGTATTGGAAAGCTTTTCTACCTGAGGG 950
||| |||||||| || ||||||||||| ||||||||||||| ||| ||||| ||||||||
Sbjct 866 GAAGTACTTTGTTACGGTTAGAGACCGAGATTGGTATTGGAGAGCGTTTCTTCCTGAGGG 925
Query 951 AGAAGATAGAGAGCATCCAGCGTGTAATCCGTTTAGCCCAAG-AGCGAAAAGCT-TAGAA 1008
||||| ||||||||||||||||||| |||||| |||| || ||| || || | |||||
Sbjct 926 TGAAGACAGAGAGCATCCAGCGTGTAGCCCGTTTGGCCCGAGAAGC-AAGAG-TCTAGAA 983
Query 1009 GGATTGAGTTTCCCCAAGAGTCTTGTGGTTGTCGCAGGTTTGGATTTGATTCGAGATTGG 1068
|| ||||||||||||||||||||||| ||||| || ||||| |||||||||| |||||||
Sbjct 984 GGGTTGAGTTTCCCCAAGAGTCTTGTCGTTGTAGCGGGTTTAGATTTGATTCAAGATTGG 1043
Query 1069 CAGTTGGCTTACGCGGAAGGGCTCAAGAAAGCGGGTCAAGAGGTAAAGCTTATGCATTTA 1128
|| ||| ||||||||||||||||||||||||||||||||||| |||||| | | ||
Sbjct 1044 CAATTGAAGTACGCGGAAGGGCTCAAGAAAGCGGGTCAAGAGGTGAAGCTTCTTTACTTG 1103
Query 1129 GAGAAAGCAACTGTTGGGTTTTACCTCTTGCCTAATAACAATCATTTCCATAATGTTATG 1188
||| |||| ||| |||| || ||| | |||||||| |||||||| ||||||| ||||||
Sbjct 1104 GAGCAAGCCACTATTGGCTTCTACTTATTGCCTAACAACAATCACTTCCATACCGTTATG 1163
Query 1189 GATGAGATTTCTGCGTTTGTAAACG 1213
|||||||| |||| ||||||||||
Sbjct 1164 GATGAGATAGCTGCATTTGTAAACG 1188
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82328893800
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5