BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477798 Length=1554 Score E Sequences producing significant alignments: (Bits) Value AT3G05150.1 | Symbols: | Major facilitator superfamily protein... 2394 0.0 AT1G08900.1 | Symbols: | Major facilitator superfamily protein... 56.5 7e-07 > AT3G05150.1 | Symbols: | Major facilitator superfamily protein | chr3:1440073-1443530 FORWARD LENGTH=1640 Length=1640 Score = 2394 bits (1296), Expect = 0.0 Identities = 1436/1505 (95%), Gaps = 4/1505 (0%) Strand=Plus/Plus Query 1 GTTTTTAGATCTAAAGACACGGTGCCTTCTCATTTCCTCCGGGCATTCTACGAAGAAAAT 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 GTTTTTAGATCTAAAAACACGGTGCCTTCTCATTTCCTCCGGGCATTTTACGAAGAAAAT 60 Query 61 GGCGAGAACAAAAGACGACATGGAGAAAATGAACGACAAAGCCGGGCCGTTGCTGCTGCC 120 || || || |||||||||||||||||||| |||||||||| ||| ||||||||||||||| Sbjct 61 GGAGACAAGAAAAGACGACATGGAGAAAAGGAACGACAAATCCGAGCCGTTGCTGCTGCC 120 Query 121 GGAGAATGGATCCGATGTCTCAGAAGAAACGTCGTGGATGGTTTATCTAAGCACAATCAT 180 ||||||||||||||| |||||||||||| | || |||||||||||||||||||| ||||| Sbjct 121 GGAGAATGGATCCGACGTCTCAGAAGAAGCATCATGGATGGTTTATCTAAGCACGATCAT 180 Query 181 TGCCGTTTGCGGTTCCTACGAGTTTGGAACATGCGTGGGATATTCTGCTCCGACCCAGTT 240 |||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct 181 TGCCGTTTGCGGTTCCTACGAGTTTGGAACATGCGTGGGATACTCCGCTCCAACACAGTT 240 Query 241 TGGGATTATGGAAGAGCTTAATTTATCATATTCCCAGTTTTCAGTTTTTGGATCGATACT 300 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | Sbjct 241 TGGGATTATGGAAGAGCTTAATTTATCATATTCCCAGTTTTCGGTTTTCGGATCGATATT 300 Query 301 GAATGTGGGAGCAGTGCTCGGCGCCATTACATCGGGGAAGATCTCTGATTTCATCGGTCG 360 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 301 GAATATGGGAGCAGTGCTCGGCGCCATTACATCGGGGAAGATTTCTGATTTCATCGGTCG 360 Query 361 GAAAGGGGCCATGAGGTTGTCTTCAGTGATCTCTGCCATCGGCTGGCTGATAATTTACTT 420 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GAAAGGGGCCATGCGGTTGTCTTCAGTGATCTCTGCCATCGGCTGGCTGATAATTTACTT 420 Query 421 CGCCAAGGGTGACGTACCTTTGGATTTCGGAAGATTTCTGACGGGTTTTGGTTGCGGCAC 480 |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || Sbjct 421 GGCCAAGGGTGACGTACCTTTGGATTTCGGAAGATTTCTAACGGGTTATGGTTGCGGTAC 480 Query 481 CCTTTCCTTTGTGGTACCGGTATTCATCGCTGAAATTAGTCCAAGAAAATTGAGAGGCGC 540 ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| || Sbjct 481 CCTTTCCTTTGTGGTACCGGTCTTCATCGCCGAAATTAGTCCGAGAAAATTGAGAGGAGC 540 Query 541 CTTAGCGACGCTTAACCAGCTCTTTATCGTAATCGGATTAGCTTCTATGTTCCTCATAGG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 CTTAGCGACGCTTAACCAGCTCTTTATCGTAATCGGATTAGCTTCTATGTTCCTCATAGG 600 Query 601 CGCCGTCGTAAATTGGAGAACTCTTGCACTAACCGGAGTTGCACCGTGCGTGGTTCTATT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 CGCCGTCGTAAATTGGAGAACTCTTGCACTAACCGGAGTTGCACCGTGCGTGGTTCTATT 660 Query 661 CTTTGGGACTTGGTTCATCCCTGAATCACCCAGATGGCTGGAAATGGTTGGCCGCCACCA 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 661 CTTTGGGACTTGGTTCATCCCTGAATCACCCAGATGGCTGGAAATGGTTGGCCGCCAC-A 719 Query 721 C-GATTTTGAAATTGCGTTGCAAAAGCTGAGGGGTCCTCACACCAATATCAGAAGAGAAG 779 ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| Sbjct 720 GTGATTTTGAAATTGCGTTGCAAAAACTGAGGGGTCCTCAGGCCAATATCACAAGAGAAG 779 Query 780 CCGAGGAAATTCAGGAGTACTTAGCGAGTCTTGCTCACCTCCCAAAAGCCACGCTG-TGG 838 ||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct 780 CCGGGGAAATTCAGGAGTACTTAGCGAGTCTTGCTCACCTCCCGAAAGCCACATTGATGG 839 Query 839 GACCTTATTGACAAAAAGAATATTCGATTTGTGATTGTTGGAGTTGGTTTGATGTTTTTC 898 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 840 -ACCTTATTGACAAAAAGAATATTCGATTTGTGATAGTTGGAGTTGGTTTGATGTTTTTC 898 Query 899 CAACAATTCGTTGGAATAAATGGTGTTATCTTCTACGCACAACAAATATTCGTATCGGCA 958 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct 899 CAACAATTCGTTGGAATTAATGGCGTTATCTTCTACGCACAACAAATATTCGTATCAGCA 958 Query 959 GGGGCATCCCCAACTCTTGGAAGCATTCTATACTCGATCGAACAAGTTGTTCTTACAGCA 1018 || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 959 GGAGCATCCCCAACTCTTGGAAGCATTCTATACTCGATCGAACAAGTCGTTCTCACAGCA 1018 Query 1019 CTCGGTGCAACATTGCTAATTGATCGTCTTGGTAGAAGGCCACTTCTTATGGCTTCAGCT 1078 || || |||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 1019 CTAGGCGCAACATTGCTAATTGATCGGCTTGGAAGAAGGCCACTTCTTATGGCTTCAGCT 1078 Query 1079 GTTGGGATGCTGATTGGATGTTTGCTCATTGGAAATTCATTTCTTTTGAAGGCTCATGGT 1138 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1079 GTTGGGATGCTGATTGGATGTTTGCTCATCGGAAATTCATTTCTTTTGAAGGCTCATGGT 1138 Query 1139 TTAGCACTTGACATCATTCCGGCCCTGGCAGTTAGTGGTGTCTTGGTCTACATTGGTTCG 1198 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1139 TTAGCACTTGACATCATTCCGGCTCTGGCAGTTAGTGGTGTCTTGGTCTACATCGGTTCG 1198 Query 1199 TTCTCTATTGGAATGGGTGCAATCCCATGGGTTATAATGTCTGAGATATTTCCAATAAAT 1258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1199 TTCTCTATTGGAATGGGTGCAATCCCATGGGTTATAATGTCTGAGATATTTCCAATAAAT 1258 Query 1259 ATGAAAGGAACTGCTGGAGGACTTGTCACTGTAGTAAATTGGCTAAGTTCATGGCTTGTC 1318 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1259 TTGAAAGGAACTGCCGGAGGACTTGTCACTGTAGTAAATTGGCTAAGTTCATGGCTTGTC 1318 Query 1319 TCCTTCACTTTCAACTTTCTCATGATTTGGAGCACTCATGGTACATTTTATGTATATGGT 1378 || |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 1319 TCATTCACTTTCAACTTTCTCATGATTTGGAGCCCTCATGGTACATTTTATGTGTATGGT 1378 Query 1379 GGCGTATGTGTATTTGCTATTGTCTTCATAGCAAAACTTGTTCCTGAAACTAAAGGCAGA 1438 || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1379 GGGGTATGTGTATTGGCTATTATCTTCATAGCAAAACTTGTTCCTGAAACTAAAGGCAGA 1438 Query 1439 ACCTTGGAAGAGATTCAAGCAATGATGATGTAATTCTATAATTATATAATACATGTTAAt 1498 ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| Sbjct 1439 ACCTTGGAAGAGATTCAAGCAATGATGATGTAACTCTGTAAATATATAATACATGTTAAT 1498 Query 1499 ttttt 1503 ||||| Sbjct 1499 TTTTT 1503 > AT1G08900.1 | Symbols: | Major facilitator superfamily protein | chr1:2852454-2855779 FORWARD LENGTH=1543 Length=1543 Score = 56.5 bits (30), Expect = 7e-07 Identities = 38/42 (90%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 1223 CCATGGGTTATAATGTCTGAGATATTTCCAATAAATATGAAA 1264 ||||||||||||||||||||||||||||| | ||| ||||| Sbjct 1156 CCATGGGTTATAATGTCTGAGATATTTCCGGTGAATGTGAAA 1197 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76706432760 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5