BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477829
Length=1621
Score E
Sequences producing significant alignments: (Bits) Value
AT3G05400.1 | Symbols: | Major facilitator superfamily protein... 2628 0.0
AT3G05155.1 | Symbols: | Major facilitator superfamily protein... 778 0.0
> AT3G05400.1 | Symbols: | Major facilitator superfamily protein
| chr3:1549586-1554148 FORWARD LENGTH=1711
Length=1711
Score = 2628 bits (1423), Expect = 0.0
Identities = 1583/1654 (96%), Gaps = 35/1654 (2%)
Strand=Plus/Plus
Query 1 TAGTCTATATATCATAGGGAAGAGAAAGAAAAAACATTCTACTTCACGCAAATA-TTGCT 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 16 TAGTCTATATATCATAGGGAAGAGAAAGAAAAAACATTCTACTTCACGCAAATATTTTAT 75
Query 60 CTCTTTG-TTCTTGTTCTTAATTAGGGGTTGATTGAAGAATATGGAAGGAGAGAAAAATA 118
||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||
Sbjct 76 CTCTTTGTTTCTTGTTCTTAATTAGGGTTTGATTGAAGAAAATGGAAGGAGAGAATAATA 135
Query 119 TGGAGAAAGGATTATTATTGGCAAAAAAGGAAGAGACTGCAAATACAACTCCACTCCTTA 178
||||||||||||| |||||||||||||||||||| | |||||||||||||||||| ||||
Sbjct 136 TGGAGAAAGGATTGTTATTGGCAAAAAAGGAAGACAGTGCAAATACAACTCCACTTCTTA 195
Query 179 TCTTCTCCACCTTCATCATTGTCTCTGCCTCCTTCACCTTTGGCGCTGCCATAGGTTATA 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 196 TCTTCTCCACCTTCATCATTGTCTCTGCCTCCTTCACCTTTGGCGCTGCCATAGGTTATA 255
Query 239 CTGCAGATACAATGTCCTCCATTATGTCAGACTTGGATCTTTCTCTCGCACAATTTTCGC 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 256 CTGCAGATACAATGTCCTCCATTATGTCAGACTTGGATCTTTCTCTCGCACAATTTTCGC 315
Query 299 TGTTTGGTTCGTTGACGACGTTTGGAGGAATGATCGGTGCAATATTCAGCGCCAAAGCTG 358
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 316 TGTTTGGTTCGTTGTCGACGTTTGGAGGAATGATCGGTGCAATATTCAGCGCCAAAGCTG 375
Query 359 C-AGCTGCCTTCGGTCATAAAATGACGTTGTGGGTGGCTGATCTATTCTGCATAACTGGT 417
| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 376 CAAG-TGCCTTCGGTCATAAAATGACGTTGTGGGTGGCTGATTTATTCTGCATAACTGGT 434
Query 418 TGGCTTGCAATTGCACTAGCCAAGAATATTATTTGGCTTGACATGGGGCGATTTTTGGTG 477
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 435 TGGCTTGCAATTTCACTAGCCAAGGATATTATTTGGCTTGACATGGGGCGATTTTTGGTG 494
Query 478 GGAATTGGAGTTGGTCTCATTAGCTACGTGGTTCCTGTATATATTGCAGAAATAACACCC 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 495 GGAATTGGAGTTGGTCTCATTAGCTACGTGGTTCCTGTATATATTGCAGAAATAACACCC 554
Query 538 AAGCACGTAAGAGGGGCTTTTACATTTAGCAATCAGCTTTTGCAAAACTGTGGAGTTGCA 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 AAGCACGTAAGAGGGGCTTTTACATTTAGCAATCAGCTTTTGCAAAACTGTGGAGTTGCA 614
Query 598 GTCGTATATTACTTTGGAAATTTCTTGTCATGGAGAACTTTAGCCATAATCGGTAGTATT 657
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 615 GTCGTATATTACTTTGGAAATTTCTTGTCATGGAGAACTTTAGCCATAATAGGTAGTATT 674
Query 658 CCATGTTGGATACAAGTTATTGGTTTGTTCTTCATACCTGAGTCTCCAAGATGGCTGGCG 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 675 CCATGTTGGATACAAGTTATTGGTTTGTTCTTCATACCTGAGTCTCCAAGATGGCTGGCG 734
Query 718 AAAAAAGGTCGTGATAAAGAATGTGAAGAAGTTCTTCAAAAGTTAAGAGGAAGAAGATAT 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 735 AAAAAAGGTCGTGATAAAGAATGTGAAGAAGTTCTTCAAAAGTTAAGAGGAAGAAAATAC 794
Query 778 GACATTGTGCCTGAAGCTTGCGAAATCAAGATTTCAGTTGAAGCTTCGAAGCAAAATTCG 837
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 795 GATATTGTGCCTGAAGCTTGCGAAATCAAGATTTCAGTTGAAGCTTCGAAGAAAAATTCG 854
Query 838 AATATCAATATTCGTAGTCTTTTCAAAAAGAGATATGCTCATCAACTTACAATCGGTATA 897
|||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 855 AATATCAACATTCGTAGTCTTTTCGAAAAGAGATATGCTCATCAACTTACAATCGGCATT 914
Query 898 GGTTTGATGCTTCTGCAACAGTTATGTGGAACTGCAGGAATAGGTTCTTACGGAAGCACT 957
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 915 GGTTTGATGCTTCTGCAACAGTTATGTGGAACTGCAGGAATAAGTTCTTACGGAAGCACT 974
Query 958 CTATTTAAACTTGCCGGGTTTCCTGCTCGGATTGGGATGATGGTGTTGTCTCTTATCGTC 1017
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 975 CTATTTAAACTTGCCGGGTTTCCTGCTCGGATTGGGATGATGGTGTTATCTCTTATCGTC 1034
Query 1018 GTACCAAAATCTTTAATGGGTCTAATCCTCGTGGATCGATGGGGGAGACGCCCACTTCTT 1077
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1035 GTACCAAAATCTTTAATGGGTCTAATCCTCGTGGATCGATGGGGAAGACGCCCACTTCTT 1094
Query 1078 ATGACTTCAGCGTTTGGGTTATGTTTAAGCTGTATCACATTGGCAGTAGCGTTTGGAGTT 1137
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1095 ATGACTTCAGCGTTGGGGTTGTGTTTAAGCTGTATCACATTGGCAGTAGCGTTTGGAGTT 1154
Query 1138 AAAGATGTCCCGGGGATTGGAAAAATTACTCCAATTTTCTGTTTCATTGGAATATTGTCG 1197
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155 AAAGATGTCCCGGGAATTGGAAAAATTACTCCAATTTTCTGTTTCATTGGAATATTGTCG 1214
Query 1198 TTTACGATGATGTTCGCAATTGGAATGGGAGCGTTACCATGGATTATAATGTCTGAGATA 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1215 TTTACGATGATGTTCGCAATTGGAATGGGAGCGTTACCATGGATTATAATGTCTGAGATA 1274
Query 1258 TTTCCAATGGATATAAAGGTATTAGCTGGGAGTTTAGTGACCATAGCAAATTGGTTCACT 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1275 TTTCCAATGGATATAAAGGTATTAGCTGGGAGTTTAGTGACCATAGCAAATTGGTTCACT 1334
Query 1318 GGTTGGATCGCCAACTACGGTTTCAATTTTATGTTGGTTTGGAGCCCAAGCGGGACTTTT 1377
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1335 GGTTGGATCGCCAACTATGCTTTCAATTTTATGTTGGTTTGGAGCCCAAGCGGGACTTTT 1394
Query 1378 ATAATATCCGCTATAATCTGTGGAGCAACAATTGTATTCACATGGTGCTTGGTGCCGGAG 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1395 ATAATATCCGCTATAATCTGTGGAGCAACAATTGTATTCACATGGTGCTTGGTGCCGGAG 1454
Query 1438 ACTCGAAGATTAACGTTAGAAGAAATCCAGCTGTCCTTTGTCAATGTTTAGGGTTCATCG 1497
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 1455 ACTCGAAGATTAACGTTAGAAGAAATCCAACTGTCGTTTGTCAATGTTTAGGGTTCATCG 1514
Query 1498 GAAGCATTCATA-ATACA-C-TA------------C-A--TCATTTGCTACAACATAATT 1539
|||||||||||| ||||| | || | | |||||||||||| ||||||
Sbjct 1515 GAAGCATTCATATATACATCATAAAGGTTGATATACTACATCATTTGCTACAT-ATAATT 1573
Query 1540 CG--T---ATC----C-ATAAATTATTTGATTAATTCAATATAATTAA--AGAGTTTCCA 1587
|| | ||| | ||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1574 CGGCTTCGATCGTATCCATAAATTATTTGATTAATTCAATATAATTAACTAAAGTTTCCA 1633
Query 1588 TTGTTTGGTTGAACTCATTGAAGATTATTTTATT 1621
|||||| |||||||||||||||||||| ||||||
Sbjct 1634 TTGTTTAGTTGAACTCATTGAAGATTAGTTTATT 1667
> AT3G05155.1 | Symbols: | Major facilitator superfamily protein
| chr3:1448570-1451213 FORWARD LENGTH=1287
Length=1287
Score = 778 bits (421), Expect = 0.0
Identities = 825/1015 (81%), Gaps = 48/1015 (5%)
Strand=Plus/Plus
Query 87 TTGATTGAAGAATATGGAAGGAGAGAA-A--AATATGGAGAAAGGATTATTATTGGCAAA 143
|||| ||||||| ||||| |||||||| | | || |||||||||||||||||| ||
Sbjct 65 TTGAGTGAAGAAAATGGAGGGAGAGAATAGTAGCATTGAGAAAGGATTATTATTGATAAG 124
Query 144 AAAGGAAGAGACTGCAAATACAACTCCACTCCTTATCTTCTCCACCTTCATCATTGTCTC 203
|||||||||| |||||||||||||||| | ||| ||||| |||| ||||||||||||||
Sbjct 125 GAAGGAAGAGAGTGCAAATACAACTCCATTTCTTGTCTTCACCACTTTCATCATTGTCTC 184
Query 204 TGCCTCCTTCACCTTTGGCGCTGCCATAGGTTATACTGCAGATACAATGTCCTCCATTAT 263
||| |||||| ||||||||| |||| |||| ||||||| | ||||||| ||||||||||
Sbjct 185 TGCTTCCTTCTCCTTTGGCGTTGCCTTAGGACATACTGCTGGTACAATGGCCTCCATTAT 244
Query 264 GTCAGA-CTTGGATCTTTCTCTCGCACAATTTTC-GCTGTTTGGTTCGTTGA-CGACGTT 320
| ||| ||| ||||||||| || |||||||||| | | |||||||| | | ||| ||
Sbjct 245 GGAAGATCTT-GATCTTTCTATCACACAATTTTCTG-TATTTGGTTCACT-ATTGACATT 301
Query 321 TGGAGGAATGATCGGTGCAATATTCAGCGCCA-AAGCTGCAGCTGCCTTCGGTCATAAAA 379
|||||||||||| || ||| |||| ||||||| || ||||| | | || ||| |||||
Sbjct 302 TGGAGGAATGATTGGAGCACTATTTAGCGCCACAA-TTGCAGATTCATTTGGTTGTAAAA 360
Query 380 TGACGTTGTGGGTGGCTGATCTATTCTGCATAACTGGTTGGCTTGCAATTGCACTAGCCA 439
|||| |||||| | |||| |||||||||||| ||| ||||||||||||||||||||||
Sbjct 361 TGACTTTGTGGATCACTGAGGTATTCTGCATAAGTGGATGGCTTGCAATTGCACTAGCCA 420
Query 440 AGAATATTATTTGGCTTGACATGGGGCGATT-TTTGGTGGGAATTGGAGTTGGTCTCATT 498
|||| ||||||||||| ||| |||| ||||| ||| || |||||||||||||||||| ||
Sbjct 421 AGAACATTATTTGGCTGGACTTGGGACGATTCTTT-GTAGGAATTGGAGTTGGTCTCCTT 479
Query 499 AGCTACGTGGTTCCTGTATATATTGCAGAAATAACACCCAAGCAC-GTAAGAGGGGCTTT 557
|| |||||||||||||||||||| ||||||||||| || || || || |||| ||||
Sbjct 480 AGTTACGTGGTTCCTGTATATATCGCAGAAATAACTCCTAA-AACTGTGCGAGGCACTTT 538
Query 558 TACATTTAGCAATCAGCTT-TTGCAAAACTGTGGAGTTGC-A-GTCGTATATTACTTTGG 614
||||||||| |||||| || |||||||| |||||||| || | | || |||||| ||||
Sbjct 539 TACATTTAGTAATCAG-TTATTGCAAAATTGTGGAGTCGCAACGGCG--TATTACCTTGG 595
Query 615 AAATTTCTTGTCATGGAGAACT-TTAGCCATAATCGGTAGTA-TTCCATG-TTGGATACA 671
||||||| |||||||||||| | ||||| |||| || | || ||||||| || ||||||
Sbjct 596 AAATTTCATGTCATGGAGAA-TAATAGCCTTAATAGGCA-TACTTCCATGCTT-GATACA 652
Query 672 AGTTATTGGTTTGTTCTTCATACCTGAGTCTCCAAGATGGCTGGCGAAAA-AAGGTCGTG 730
| || |||| ||||| ||| | || || |||||||||||| |||| |||| |||||||||
Sbjct 653 ACTTGTTGGGTTGTTTTTCGTCCCCGAATCTCCAAGATGGTTGGC-AAAAGAAGGTCGTG 711
Query 731 ATAAAGAATGTGAAGAAGTTCTTCA-AAAGTTAAGAGGAAGAAG-ATATGACATTGTGCC 788
| |||||||||| | |||||||| ||| ||||||| ||| | | || ||||||
Sbjct 712 ACGAAGAATGTGAGGTTGTTCTTCAGAAA-CTAAGAGG-AGATGAAGCGGATATTGTGAA 769
Query 789 TGAAGCTTGCGAAATCAAGATTTCAGTTGAAGCTTCGAAGCAAAATTCGAATATCAATAT 848
||| || |||||| |||||| ||||| |||| | | ||||||||| ||
Sbjct 770 GGAAACTCAAGAAATCTTGATTTCTGTTGAGGCTT-----C----TGCGAATATCAGCAT 820
Query 849 TCGTAGTCTTTTCAAAAAGAGATATGCTCATCAACTTACAATCGGTATAGGTTTGATGCT 908
||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||
Sbjct 821 GCGTAGTCTTTTCAAAAAGAAATATACTCATCAACTTACAATTGGTATAGGTTTGATGCT 880
Query 909 TCTGCAACAGTTATGTGGAACTGCAGGAATAGGTTCTTAC---GGAAGCACTCTATTTAA 965
||||||||||||| |||| | ||||||| |||||| |||| || ||| | |||| |
Sbjct 881 TCTGCAACAGTTAAGTGGGAGTGCAGGATTAGGTTATTACACTGGTAGCG-T--ATTTGA 937
Query 966 ACTTGCCGGGTTTCCTGCTCGGATTGGGATGATGGTGTTGTCTCTTATCGTCGTACCAAA 1025
|||||||| |||||| ||||||||||||||| |||||||||| || |||| ||||||||
Sbjct 938 TCTTGCCGGATTTCCTTCTCGGATTGGGATGACGGTGTTGTCTATTGTCGTGGTACCAAA 997
Query 1026 ATCTTTAATGGGTCTAATCCTCGTGGATCGATGGGGGAGACGCCCACTTCTTATG 1080
| || || ||||||| || || ||||| |||||||| ||| | || |||||||||
Sbjct 998 AGCTATATTGGGTCTGATACTTGTGGAACGATGGGGAAGAAGACCGCTTCTTATG 1052
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80069869275
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5