BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477854
Length=3487
Score E
Sequences producing significant alignments: (Bits) Value
AT3G05630.1 | Symbols: PLDP2, PDLZ2, PLDZETA2 | phospholipase D... 3323 0.0
> AT3G05630.1 | Symbols: PLDP2, PDLZ2, PLDZETA2 | phospholipase
D P2 | chr3:1635200-1640348 FORWARD LENGTH=3505
Length=3505
Score = 3323 bits (1799), Expect = 0.0
Identities = 2002/2101 (95%), Gaps = 9/2101 (0%)
Strand=Plus/Plus
Query 1 TATATAACGTCGATCAATTGATTAGAGGAATCTCGAGTATTTCTGACATGCAATCGTGAA 60
|||||||||||||| |||||| || ||||||||||||||||| ||||||||||||||||
Sbjct 27 TATATAACGTCGATTTATTGATCAGTGGAATCTCGAGTATTTCGGACATGCAATCGTGAA 86
Query 61 CGGCGAGTTTCGACGACGGTTAGGGGAATATTAATCGATGTCGACGGATAAATTGCTACT 120
||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||
Sbjct 87 CGGCGAGTTTCGACGACGGTTTGGGG-A-GTTAATCGATGTCGACGGATAAATTACTACT 144
Query 121 TCCTAACGGCGTTAAGTCAGACGGAGTCATCAGAAGGACCAGAGCTGATGCTGCGGCGGC 180
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 145 TCCTAACGGCGTTAAGTCAGACGGAGTCATCAGAATGACCAGAGCTGATGCT---GCGGC 201
Query 181 GGCGGCCGCTTCTTATTCTCTCGGCGGTGGAAGTCAAATATTTGACGAGCTCCCCAAGGC 240
|||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 202 GGCGGCAGCTTCTTCTTCTCTCGGCGGTGGAAGTCAAATATTCGACGAGCTTCCCAAGGC 261
Query 241 TGCGATCGTCTCGGTCTCGAGACCCGACACCACCGATTTTAGTCCCTTGCTTCTTTCTTA 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 262 TGCGATCGTCTCGGTCTCGAGACCTGACACCACCGATTTTAGTCCCTTGCTTCTTTCTTA 321
Query 301 CACCTTGGAGCTTCAGTATAAACAGTTCAAGTGGACATTACAGAAGAAGGCTTCTCAAGT 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 322 CACCTTGGAGCTTCAGTATAAACAGTTCAAGTGGACATTACAAAAGAAGGCTTCTCAAGT 381
Query 361 TCTATACTTACATTTTGCGTTGAAGAAACGTTTGATCATTGAAGAACTTCACGACAAGCA 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 382 TCTGTACTTACATTTTGCGTTGAAGAAACGTTTGATCATTGAAGAACTTCACGACAAGCA 441
Query 421 CGAACAGGTTAGAGAGTGGCTACACAGCTTGGGGATTTTTGATATGCAAGGATCAGTTGT 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 AGAACAGGTTAGAGAGTGGCTACACAGCTTGGGGATTTTTGATATGCAAGGATCAGTTGT 501
Query 481 GCAAGATGATGAAGAACCTGATGATGGCGCTCTTCCTCTGCACTATACTGAAGATAGTAT 540
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 502 GCAAGATGATGAAGAACCTGACGATGGTGCTCTTCCTCTGCACTATACTGAAGATAGTAT 561
Query 541 CAAGAACAGGAATGTTCCTTCGCGTGCAGCGTTTCCAATCATTCGTCCAACTATAGGCCG 600
||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct 562 CAAGAACAGGAATGTTCCTTCCCGTGCAGCGCTTCCAATCATTCGTCCAACGATAGGCCG 621
Query 601 GTCAGAGACAGTTGTAGACCGTGGGAGAACCGCAATGCAAGGCTACTTGAGTCTCTTTCT 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 622 GTCAGAGACAGTTGTAGATCGTGGGAGAACCGCAATGCAAGGCTACTTGAGTCTCTTTCT 681
Query 661 AGGGAACTTGGACATTGTAAACTCTAAAGAGGTCTGCAAGTTCCTTGAAGTTTCTAGACT 720
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 682 AGGGAACTTGGACATTGTAAACTCCAAAGAGGTCTGCAAGTTCCTAGAAGTTTCTAGACT 741
Query 721 CTCGTTTGCTAGAGAGTACGGTTCCAAGATGAAAGAAGGATTTGTCACAGTGAAGCACCT 780
||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||| |
Sbjct 742 CTCATTTGCTAGAGAGTACGGTTCCAAGATGAAAGAAGGGTATGTCACAGTGAAGCACTT 801
Query 781 GAGGGAAGTCCCGGGTTCTGATAGTGTCCGATGCTGTCTTCCTTCACATTGTCTCGGCTT 840
|||||| ||||| ||||||||| |||||||||||||||||||| |||| |||||||| ||
Sbjct 802 GAGGGACGTCCCAGGTTCTGATGGTGTCCGATGCTGTCTTCCTACACACTGTCTCGGTTT 861
Query 841 CTTTGGAACTAGCTGGACAAAGGTTTGGGCCGTTCTGAAACCGGGATTCTTGGCGTTACT 900
||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct 862 CTTCGGAACTAGCTGGACAAAGGTTTGGGCGGTTCTGAAACCAGGATTTTTGGCGTTACT 921
Query 901 AGAAGATCCATTTAGCGGAAAGCTTCTAGATATAATGGTGTTTGACACATTGGGGTTAC- 959
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 922 AGAAGATCCATTCAGCGGAAAGCTTCTAGATATAATGGTGTTCGACACATTGGGGTTGCA 981
Query 960 AGAGTACGAAAGAGTCTTCTGAACAACCGCGTTTGGCTGAACAGGTGAAGGAACACAACC 1019
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 982 AG-GTACTAAAGAGTCTTCTGAACAACCGCGTTTGGCTGAACAGGTGAAGGAACACAACC 1040
Query 1020 CATTGCGTTTTGGCTTTAAAGTTACTAGTGGGGACCGAACCGTGAGGCTGAGAACGACCA 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1041 CATTGCGTTTTGGCTTTAAAGTTACTAGTGGGGACCGAACCGTGAGGCTGAGAACAACGA 1100
Query 1080 GCAGCAGGAAAGTTAAAGAGTGGGTTAAGGCCGTGGACGAAGCTGGCTGTTACAGTCCAC 1139
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1101 GCAGCAGGAAAGTTAAAGAGTGGGTTAAGGCCGTGGACGAAGCTGGTTGTTACAGTCCAC 1160
Query 1140 ATCGGTTTGGTTCGTTTGCACCACCTAGAGGCTTGACATCGGACGGAAGCCAGGCGCAGT 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1161 ATCGGTTTGGTTCGTTTGCACCACCTAGAGGCTTGACATCGGACGGAAGCCAGGCACAGT 1220
Query 1200 GGTTCGTAGACGGTCACACTGCGTTTGAAGCCATCGCGTTTGCAATCCAAAACGCAACAT 1259
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1221 GGTTCGTAGACGGTCACACTGCGTTTGAAGCTATCGCGTTTGCAATCCAAAACGCAACAT 1280
Query 1260 CAGAGATATTTATGACTGGTTGGTGGTTATGTCCGGAGCTATATCTCAAACGCCCCTTTG 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1281 CAGAGATATTTATGACTGGTTGGTGGTTATGTCCGGAGCTATATCTCAAACGCCCCTTTG 1340
Query 1320 AAGATCATCCGTCATTGCGGCTCGATGCATTGCTGGAGACAAAAGCAAAACAGGGCGTTA 1379
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1341 AAGATCATCCATCATTGCGGCTCGATGCATTGCTGGAGACAAAAGCAAAACAGGGCGTTA 1400
Query 1380 AGATTTATATTCTTCTGTATAAGGAAGTCCAAATCGCGCTGAAAATCAACAG-TATGTAC 1438
|||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1401 AGATATATATTCTTCTGTATAAGGAAGTCCAAATCGCGCTGAAAATCAACAGCT-TGTAC 1459
Query 1439 AGCAAGAAACGGCTTCAAAACATTCACAAGAACGTCAAAGTTCTTCGTTATCCAGACCAT 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1460 AGCAAGAAACGGCTTCAAAACATTCACAAGAACGTCAAAGTTCTTCGTTATCCAGACCAT 1519
Query 1499 CTCTCCTCCGGCATATACCTCTGGTCGCACCACGATAAGATAGTGATTGTGGATTACCAA 1558
|||||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||
Sbjct 1520 CTCTCCTCCGGCATTTACCTCTGGTCGCACCACGAGAAAATAGTGATTGTAGATTACCAA 1579
Query 1559 GTTTGCTTCATTGGAGGGTTAGATCTCTGTTTTGGCCGCTACGATACAGCTGAACACAAG 1618
||||| ||||||||||||||||||||||||||||| || ||||||||||| || ||||||
Sbjct 1580 GTTTGTTTCATTGGAGGGTTAGATCTCTGTTTTGGGCGGTACGATACAGCGGAGCACAAG 1639
Query 1619 ATCGGAGATTGCCCTCCTTATATATGGCCAGGAAAGGATTATTACAATCCTAGAGAATCT 1678
|| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct 1640 ATTGGAGATTGCCCTCCTTATATATGGCCTGGAAAAGATTACTACAATCCTAGAGAATCT 1699
Query 1679 GAACCAAACTCATGGGAAGAAACGATGAAAGATGAGCTAGACAGGAGAAAGTACCCGAGA 1738
|||||||| || |||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1700 GAACCAAATTCGTGGGAAGAAACGATGAAAGATGAGTTAGACAGGAGAAAGTACCCGCGA 1759
Query 1739 ATGCCGTGGCACGAAGTCCACTGTGCTCTATGGGGACCGCCTTGTCGCGATGTGGCTAGA 1798
|||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||
Sbjct 1760 ATGCCGTGGCACGATGTCCACTGCGCTCTATGGGGACCGCCTTGTCGGGATGTGGCTCGA 1819
Query 1799 CATTTTGTCCAGAGGTGGAACCACTCTAAGAGAAACAAGGCACCTAATGAACAGACAATT 1858
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1820 CATTTTGTCCAGCGGTGGAACCACTCTAAGAGAAACAAGGCACCTAATGAACAGACGATT 1879
Query 1859 CCGTTGCTGATGCCTCACCACCATATGGTTCTTCCTCACTACTTGGGAACTAGAGAGATC 1918
|| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1880 CCATTGTTGATGCCTCACCACCACATGGTTCTTCCTCACTACTTGGGAACTAGAGAGATC 1939
Query 1919 GATATTATCGCAGCGGCTAAACCCGAGGAAGATCCTGACAAACCTGTTGTTCTTGCCAGA 1978
||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct 1940 GATATAATCGCAGCGGCTAAACCAGAGGAAGACCCTGACAAACCTGTCGTTCTTGCCAGA 1999
Query 1979 CAAGACTCTTTCTCTTCTACATCGCCGCCACAGGACATCCCTTTGCTTCTCCCACAAGAA 2038
|| ||||||||||||||| | || ||||| || || ||||||||||||||||||||||||
Sbjct 2000 CATGACTCTTTCTCTTCTGCCTCACCGCCCCAAGAAATCCCTTTGCTTCTCCCACAAGAA 2059
Query 2039 ACCGATGCAGATTTCACCAGCAGAGGAGATCTGAAGTTAGACAGCGGTTCAAGACAAGAT 2098
||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct 2060 ACCGATGCAGATTTCGCCGGCAGAGGAGATCTGAAGTTAGACAGCGGTGCAAGACAAGAT 2119
Query 2099 C 2099
|
Sbjct 2120 C 2120
Score = 2183 bits (1182), Expect = 0.0
Identities = 1302/1361 (96%), Gaps = 3/1361 (0%)
Strand=Plus/Plus
Query 2128 TCCTGGGGAAACTTCAGAGGAAAGCGATCGGGACGAGGCTGTGAACGACTGGTGGTGGCA 2187
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2119 TCCTGGGGAAACTTCAGAGGAAAGCGATCTGGACGAGGCTGTGAACGACTGGTGGTGGCA 2178
Query 2188 GATTGGGAAGCAAAGTAATTGCCGGTGTCAAATAATCAGAAGTGTTAGCCAATGGTCTGC 2247
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2179 GATTGGGAAGCAGAGTGATTGCCGGTGTCAAATAATCAGAAGTGTTAGCCAATGGTCTGC 2238
Query 2248 TGGGACGAGCCAGTCTGAAGATAGCATTCATAGAGCTTATTGTTCGCTTATCCAGAACGC 2307
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2239 TGGGACGAGCCAGCCTGAAGATAGCATTCATAGAGCTTATTGTTCGCTTATCCAGAACGC 2298
Query 2308 TGAACATTTTATCTACATAGAGAACCAATTCTTTATCTCCGGGCTAGAAAAAGATGACAC 2367
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 2299 TGAACATTTTATCTACATAGAGAACCAATTCTTCATCTCCGGGCTAGAAAAAGAGGACAC 2358
Query 2368 GATTCTTAACCGCGTTCTCGAAACGTTATACAGGCGCATTCTGAAGGCTCATGAACAGAA 2427
||| || ||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||
Sbjct 2359 GATCCTAAACCGCGTTCTAGAAGCGTTATACAGACGCATTCTGAAGGCTCATGAAGAGAA 2418
Query 2428 CAAGTGCTTCCGCGTTGTGATCGTTATTCCGCTTCTCCCTGGATTTCAGGGAGGTATTGA 2487
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2419 CAAGTGCTTCCGCGTTGTGATCGTTATTCCGCTACTCCCTGGATTTCAGGGAGGTATTGA 2478
Query 2488 TGACTTCGGAGCAGCCACGGTTCGAGCACTGATGCATTGGCAATACCGTACGATCTCTAG 2547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2479 TGACTTCGGAGCAGCCACGGTTCGAGCACTGATGCATTGGCAATACCGTACGATCTCTAG 2538
Query 2548 AGAACGAACTTCGATTCTTGACAACCTTAACGCTTTGCTCGGTCCCAAGACGCAAGAATA 2607
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2539 AGAAGGAACTTCGATTCTTGACAACCTTAACGCTTTGCTCGGTCCCAAGACGCAAGATTA 2598
Query 2608 TATCTCTTTCTATGGTTTGAGATCGTACGGACGGCTGTTTGAGGACGGTCCAATTGCCAC 2667
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2599 CATCTCTTTCTATGGTTTGAGATCGTACGGACGGCTGTTTGAGGACGGTCCAATTGCCAC 2658
Query 2668 TAGCCAGATTTACGTGCACAGCAAGCTAATGATTGTTGATGACCGGATTGCGGTGATCGG 2727
|||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||
Sbjct 2659 TAGCCAGATTTACGTGCATAGCAAGTTAATGATTGTTGATGACCGGATCGCAGTGATCGG 2718
Query 2728 ATCTTCTAATATAAACGATCGGAGCTTACTAGGCTCCCGAGACTCTGAGATCGGGGTTGT 2787
||||||||||||||||||| ||||||||||||| || ||||||||||||||||| |||||
Sbjct 2719 ATCTTCTAATATAAACGATAGGAGCTTACTAGGTTCACGAGACTCTGAGATCGGTGTTGT 2778
Query 2788 GATCGAAGACAAAGAATTCGTGGAATCTTCAATGAACGGAGTGAAGTGGATGGCCGGGAA 2847
||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 2779 GATTGAAGACAAAGAATTCGTGGAATCTTCGATGAACGGAATGAAGTGGATGGCCGGGAA 2838
Query 2848 ATTCTCTTACAGTCTTAGATGTTCCTTGTGGTCAGAGCATCTCGGCCTTCACCCCGGAGA 2907
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2839 GTTCTCTTACAGTCTTAGATGTTCCTTGTGGTCAGAGCATCTCGGCCTTCACGCCGGAGA 2898
Query 2908 GATGCAGAAGATCGAAGATCCAATCAAAGATGCAACATACAAGGACTTGTGGATGGCAAC 2967
||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 2899 GATTCAGAAGATCGAAGATCCAATCAAAGATGCAACATACAAAGACTTATGGATGGCAAC 2958
Query 2968 GGCTAAGAAGAACACCGATATCTACGACCAAGTCTTCTCCTGCATCCCGAATGAACATAT 3027
|||||||| ||||| || |||||| ||||||||||||| ||||||||||||||||||||
Sbjct 2959 AGCTAAGAAAAACACGGACATCTACAACCAAGTCTTCTCGTGCATCCCGAATGAACATAT 3018
Query 3028 ACGCTCAAGAGCTGCATTGAGACACAATATGTCTATTTGTAAAGACAAGTTGGGTCATAC 3087
||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||
Sbjct 3019 ACGCTCAAGAGCTGCATTGAGACACAATATGGCTCTTTGTAAAGACAAGTTGGGTCACAC 3078
Query 3088 TACGATCGACCTTGGCATTGCACCAGAGAGGCTAGATTCATGCGGCAGCGACTCGTGGGA 3147
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 3079 TACGATCGACCTTGGCATTGCACCGGAGAGGCTAGAATCATGCGGCAGCGACTCGTGGGA 3138
Query 3148 GATGCTGAAGGAGACAAGAGGGCACCTTGTGTGTTTCCCATTACAGTTTATGTGTGATCA 3207
||| |||||||||||||||||| |||||||||| |||||||||||||| |||||||||||
Sbjct 3139 GATTCTGAAGGAGACAAGAGGGAACCTTGTGTGCTTCCCATTACAGTTCATGTGTGATCA 3198
Query 3208 AGAAGATCTCAGACC-GGTTTTCAACGAATCCGAGTTCTACACTGCTCCTCAAGTCTTCC 3266
||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 3199 AGAAGATCTCAGACCAGGTTT-CAACGAATCTGAGTTCTACACTGCTCCTCAAGTCTTCC 3257
Query 3267 ACTGACCACTATTTAT-GTACGCCCAGTTCTCTTTAAACAGTTAATAGAGTACCTAAGCT 3325
||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3258 ACTAACCACTATTTATTGTACGCCCAGTTCTCTTTAATCAGTTAATAGAGTACCTAAGCT 3317
Query 3326 CACACGTTACTTTTGTATAGAGATGTTAGTTATATAGAAAGAGGAAATTCATTTGATTGC 3385
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3318 CACACGTTACTTATGTATAGAGATGTTAGTTATATAGAAAGAAGAAATTCATTTGATTGC 3377
Query 3386 TTCCTAGATTCGCAGAGGTATGTGTGTGTATATTATACACTTCTTGTAAATAATAATGTT 3445
||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 3378 TTCCTAGGTTCGCAGAGGTATGTGTGTGTATAGTATACACTTCTTGTAAATCATAATGTT 3437
Query 3446 TATGTACCTCAAGCTGTACAATACATCTTCAATTGCGGATA 3486
||||| |||||||||||||||||||||||||||||||||||
Sbjct 3438 TATGTGCCTCAAGCTGTACAATACATCTTCAATTGCGGATA 3478
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 173577622780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5