BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477867
Length=2842
Score E
Sequences producing significant alignments: (Bits) Value
AT3G05750.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 3877 0.0
AT5G26910.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 863 0.0
> AT3G05750.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: membrane; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G26910.1); Has
2317 Blast hits to 1467 proteins in 247 species: Archae -
4; Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink). |
chr3:1704120-1707678 FORWARD LENGTH=2900
Length=2900
Score = 3877 bits (2099), Expect = 0.0
Identities = 2501/2687 (93%), Gaps = 60/2687 (2%)
Strand=Plus/Plus
Query 192 AGAGAGACGAAAATGAAAGACTTTCGTTGTTTTTAGGGTTTCCATCTTCAGTATCTCAGA 251
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 235 AGAGAGACGAAAGTGAAAGACTTTCGTTGTTTTTAGGGTTTCAATCTTCAGTATCTCAGA 294
Query 252 TTTTCACATCTGGGTCTTCGTCTCGGTGCCTACATTTTCTTGTTAACGTTTAGACAATTT 311
||||||||||||||| ||||||| |||||||||||| ||||||| |||||||||| ||||
Sbjct 295 TTTTCACATCTGGGTATTCGTCTTGGTGCCTACATTATCTTGTTGACGTTTAGACTATTT 354
Query 312 CGAATTCGATGGTAGAAATGGAGGTTGTTGAGAGGAAACGATCCAGAGGAGGTTTTCTAA 371
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 355 CGAATTTGATGGTAGAAATGGAGGCTGTTGAGAGGAAACGATCCAGAGGAGGTTTTCTAA 414
Query 372 ATATGTTTGATTGGCCTGGTAAATCCCGGAAGAAGTTCTTCTCCTCTA--A-CAGCAGCT 428
|||||||||||||||||||||||||||| |||||| |||||||||||| | ||||||||
Sbjct 415 ATATGTTTGATTGGCCTGGTAAATCCCGTAAGAAGCTCTTCTCCTCTAGCAGCAGCAGCT 474
Query 429 CGAAACTCTCCGAAGCATCAAAGCAAGAAAAACAAAATGCTCAAAACCCCTCAAAGTCAT 488
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 475 CGAAACTCTCCGAAGGATCAAAGCAAGAGAAACAAAATGCTCAAAACCCCTCAAAGTCAT 534
Query 489 GGCCCTCTCCGATTGAGAGG-GATGAGATTGAAAAGAATTCAACTTACAATCCGAGAAGT 547
||||||||| ||||||| || |||||||||| ||||||||||||||||||||| ||||||
Sbjct 535 GGCCCTCTCTGATTGAG-GGAGATGAGATTGGAAAGAATTCAACTTACAATCCCAGAAGT 593
Query 548 GACTCGAGTTGTTCAACATCCACTGCCACTAGTGATGATGGACAAGGGTCCAAAGCTCCG 607
|||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 594 GACTCGAGTTGTTCAACATCCACTCCCACTAGTGATGATGGACAAGGTTCCAAAGCTCCA 653
Query 608 AGTG-TGATTGCGAGGCTCATGGGTTTAGAGTCTCTACCTGTACCAAATGCCTTGGAGCC 666
|||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 654 AGTGTTG-TTGCGAGGCTCATGGGTTTAGAGTCTATACCTGTACCAAATGCCTTGGAGCC 712
Query 667 CCGGTC-TAATCCTGATTTTGATCCATACTTCCTCAGATCCTCACGCAAGACAAGCACAT 725
|||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 713 CCGG-CGTAATCCTGATTTTGATCCATACTTCCTCAGATCCTCACGCAAGGCAAGCACAT 771
Query 726 GGGATGCATATGAGAATTTGGGTTATGTAAATCTCCGCAGTGACTATGATGGTATTTCTT 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 GGGATGCATATGAGAATTTGGGTTATGTAAATCTCCGCAGTGACTATGATGGTATTTCTT 831
Query 786 GGGACCATTTGGATTCAAGAATGAATAAAGAGTGTAACCGGCCTATCGACCGCTTTCAAA 845
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 832 GGGACCATTTGGATTCAAGAATGAACAAGGAGTGTAACCGGCCTATCGACCGCTTTCAAA 891
Query 846 CCGAAACGTTACCTCCAAGGTCGGCTAAACCAATCCCTGTCACTCACAATAGGCTCTTGT 905
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 892 CCGAAACGTTACCTCCAAGGTCGGCTAAACCAATCCCTGTCACCCACAATAGGCTCTTGT 951
Query 906 CTCCTATCCGAAGTCCTGGATTTGTTCAGTCCAGGAACCCTGCTTCTGTAATGGAAGCAG 965
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 952 CTCCTATCCGGAGTCCTGGGTTTGTTCAGTCCAGGAACCCTGCTTCTGTAATGGAAGAAG 1011
Query 966 CTTCGAGAATGATTGAACCAAGTCCTCGGATAGTTGCTAAAACACGGTTTTCATCATCTG 1025
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1012 CTTCGAGAATGATTGAACCAAGTCCTCGGGTAGTTGCTAAAACACGGTTTTCATCATCTG 1071
Query 1026 ATTCCTCTTCATCACTTCCAATGAGGATCAGAGATTTGAAAGAGAAACTAGAAGCTTCAC 1085
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1072 ATTCCTCTTCATCACTTCCAATGAAAATCAGAGATTTGAAAGAGAAACTAGAAGCTTCAC 1131
Query 1086 AGAAAGGACAAAGTCCTCAAGTCTCTAATGGTACCTGCAACAATAAGTGCTTCAGAGGAA 1145
||||||||||||| |||||| |||| ||||| || ||||| |||||||||||||||||||
Sbjct 1132 AGAAAGGACAAAGCCCTCAAATCTCAAATGGCACTTGCAATAATAAGTGCTTCAGAGGAA 1191
Query 1146 AGCAAGATGAAAAGAGAACTACATTATCACTCAAGACACAAGAGATAAATAAGTTATTGG 1205
|||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct 1192 AGCAAGATGAAAAGAGAACTACATTACCACTCAAGACACAAGAGCGAAATAATTTATTGG 1251
Query 1206 GAGAAAGCAGGTTTGGTGGTTCGAAGGGTAAAGTGAAGCCGCCCTCTGTATCTGCACATG 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 GAGAAAGCAGGTTTGGTGGTTCGAAGGGTAAAGTGAAGCCGCCCTCTGTATCTGCACATG 1311
Query 1266 CAAAGGCCAATACTATTCACAAGCGGGACAGTTCAGTGCTCTCAAGTGGCAACAGAGACC 1325
||||||||||||||||||||||||| ||||||||| ||||||||| |||| |||||||||
Sbjct 1312 CAAAGGCCAATACTATTCACAAGCGAGACAGTTCAATGCTCTCAAATGGCTACAGAGACC 1371
Query 1326 AAAAGAAGAAGGTGGAAACTAAGAACCGCATAGTAAGAAA-TGGTCTCAAAGAATCTTCT 1384
|||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||
Sbjct 1372 AAAAGAAGAAGGTGGAAACTAAGAACCGCATAGTAA-AAAGTGGTCTTAAAGAATCTTCT 1430
Query 1385 GCTAGCACTAGGAAAACCGTGGATAAGCCAAATAACCAGAAACAGAACCAATTTGCTGAA 1444
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1431 GCTAGCACTAGGAAAACCGTTGATAAGCCAAATAACCAGAAACAGAACCAATTTGCTGAA 1490
Query 1445 ACATCTGTTTCAAATCAGAGAGGCAGCAAAGTGATGAAGAAAGTAAACAAGGTTTTGGTG 1504
|| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 1491 ACGTCTGTTTCAAATCAGAGAGGCAGAAAAGTGATGAAGAAAGTAAACAAAGTTTTGGTG 1550
Query 1505 GAAAGCGGAACTACAACTAAGAAGCCTGGTTTTACAGCAACATCAGCGGAAAAGAGCACT 1564
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1551 GAAAACGGAACTACAACTAAGAAGCCTGGTTTTACAGCAACATCAGCGAAAAAGAGCACT 1610
Query 1565 GCTTCATCCTTGTCCCGCAAAAAGAATCTTCCCCGCAACAAAAAATCGGCAAATGGGGTG 1624
||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||||
Sbjct 1611 TCTTCATCTTTGTCCCGCAAAAAGAATCTTTCCCGCAGCAAAAAACCGGCAAATGGGGTG 1670
Query 1625 CAAGAAGCTGGAGTCAACAGTGATAAACGGATGAAAAAGGGTGAGAAGTTGATAAAATGT 1684
|||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct 1671 CAAGAAGCTGGAGTTAACAGTGATAAACGGATCAAAAAGGGTGAGAAGGTGATAAAATGT 1730
Query 1685 AACATCACCGTTGATGGCGGGTTGAAGTCAGGGGACGATGATCGAAAGAAGGACATGGAT 1744
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1731 AACATCACCGTCGATGGCGGGTTGAAGACAGGGGACGATGATCGAAAGAAGGACATGGAT 1790
Query 1745 GTGATTTCGTTCACTTTCTCATCTCCGATCAAAGGTTTATCATCCA-ATTCGCGATCCTC 1803
||||||||||||||||||||||| |||||||||||||||||||| | |||||| || ||
Sbjct 1791 GTGATTTCGTTCACTTTCTCATCCCCGATCAAAGGTTTATCATC-AGATTCGCAATACTT 1849
Query 1804 CATCAAAAAGACTGATCAAGATACAGAATCAGCACTTAGTTTCAATAAGATAGACAGTGA 1863
| ||||||| |||||||||| |||| ||||||||| |||||||||||||||| |||||
Sbjct 1850 TTTAAAAAAGAATGATCAAGATGCAGAGTCAGCACTTTGTTTCAATAAGATAGATAGTGA 1909
Query 1864 TTCTCTAAATTTTCTGTTGGAGAAAAAGCTCAGAGAGCTAACTTCTAAGATTGAGTCATC 1923
|||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 1910 TTCTCTAAATTTTCTGTTGGAGAAAAAGCTCAGAGAACTAACCTCTAAGATGGAGTCATC 1969
Query 1924 TTGCAGTAGTCTGACCCAAGAAGAAGAGTCTTCGGGTTCCATTACAAAGGATTGGGTGAA 1983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1970 TTGCAGTAGTCTGACCCAAGAAGAAGAGTCTTCGGGTTCCATTACAAAGGATTGGGTGAA 2029
Query 1984 TGGGACGATATCATTGCCGTCAGATGATCTGGATAACGGTTTATCAGAGAGCGAATCTGT 2043
|||||| | |||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 2030 TGGGACAAGATCATTGCCGTCAGATGATCAGGATAACGGTTTATCAGAAAGCGAATCTGA 2089
Query 2044 TTCTGACTATAGTAGTTCATTCTACAAAAATAAAATATTCCAGGCAGAAGAAGATCAGGA 2103
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||
Sbjct 2090 TTCTGACTATAGTAGTTCATTCTACAAAAAGAAAATATTCCAGGCAGAAGATGATGAGGA 2149
Query 2104 AGTTGACAGCTTCAGCAATGACGAAAATCTCCAAATTTCCTGCAGCACGAGTTTCTCAAA 2163
|||| |||| ||||||| || ||||||||||||||| ||||||||||||||||||||||
Sbjct 2150 AGTTAACAGTTTCAGCACTGCCGAAAATCTCCAAATCTCCTGCAGCACGAGTTTCTCAAG 2209
Query 2164 TTCACGCAATGAATATCTCCATGGA-ATTGGAGAAACCGAACTCTCAGAATCTG------ 2216
|||||||||||| |||| |||| | |||| |||||||||||||||||||||||
Sbjct 2210 TTCACGCAATGATTATCACCATA-ACATTGAAGAAACCGAACTCTCAGAATCTGTTGCTT 2268
Query 2217 -A--AGAAG--GA-------CATGACTGGGAGCTCGAGTACATAACCGAGATCATAGCCT 2264
| ||||| || |||||||||||||||||||||||||| |||||||| ||||
Sbjct 2269 TATCAGAAGCTGAAGAAGGTCATGACTGGGAGCTCGAGTACATAACGGAGATCATTGCCT 2328
Query 2265 CTGGCCAACTGATGGTTAAAGAATTCTCCTTGGGGATGGCTACTGCTATATTACCTCTGA 2324
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2329 CTGGCCAACTGATGATTAAAGAATTCTCCTTGGGGATGGCTACTGATATATTACCTCTGA 2388
Query 2325 GCCTT-TTCGATGAAATCGAAGGCAAGAGAGATGCTCGGGGCAAGATGGAGAGAAAAACA 2383
|| || |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 2389 GC-TTATTCGATGAAACCGAAGGCAAGAGAGATGCTCGGGGAAAGATCGAGAGAAAAACA 2447
Query 2384 CTGTTCGACTTGGTGAATCAGTGCTTAACACTCAAATGCGAGCAGATGTTCATGGGAAGC 2443
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 2448 CTGTTTGACTTGGTGAATCAGTGGTTAACACTCAAATGCGAGCAGATGTTCATGGGAACC 2507
Query 2444 TGCAAAGGAGTGTTGTTGGGGAAACAAGACATTTTTGTTgaaag-aggagagattttggc 2502
||||||||||||||| ||| ||||||||||||||| ||||||| || ||||||||||||
Sbjct 2508 TGCAAAGGAGTGTTG--GGG-AAACAAGACATTTTTCTTGAAAGGAG-AGAGATTTTGGC 2563
Query 2503 agaagaagtgaagaaagaggttcaaggattgaagaagatgagagagatgatgatgatgga 2562
||| ||||| |||||||| ||| |||||||||||||||||||||||||||||| | |
Sbjct 2564 AGACCAAGTGTTGAAAGAGGCTCAGGGATTGAAGAAGATGAGAGAGATGATGATG--G-A 2620
Query 2563 tgagCTAGTTGACAATAACATGAGTAGTTGTGAAGGGAAATGGCTTGATTACAAAAGAGA 2622
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 2621 TGAGCTAGTTGACAATGACATGAGTAGTTGTGAAGGGAAATGGCTTGATTACATGAGAGA 2680
Query 2623 GACGTATGAAGAAGGAGTTGAGATTGAAGAAGAGATTGTGTCCGAATTAGTTGATGACTT 2682
||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2681 GACTTACGAAGAAGGAATTGAGATTGAAGAAGAGATTGTGTCCGAATTAGTTGATGACTT 2740
Query 2683 AGTTAATGATCTTATCATGTGTTTTTGACAACAACCCCTTGGTCTTCTTCTCTCCAACAT 2742
| ||||||||||||||||||||| |||||| ||| || ||||||||||||||||||||||
Sbjct 2741 AATTAATGATCTTATCATGTGTTGTTGACACCAATCCTTTGGTCTTCTTCTCTCCAACAT 2800
Query 2743 GAGAGTGAAATTGTTTTCTATAGGATTATCTGTTAAAAACAAGATTAGGCTCGA-CTACA 2801
|||||||||||||||||||||||||| | |||| |||||||||||| || ||| |
Sbjct 2801 GAGAGTGAAATTGTTTTCTATAGGAT-A------AAAA-CAAGATTAGGCT-GAACTAAA 2851
Query 2802 TTCCCTCACAG--TG---TAA-TTTTTGATCTCTGAAATCGCAAATA 2842
||| |||||| || ||| ||||| ||||||||||||| |||||
Sbjct 2852 TTCTGTCACAGGCTGAACTAAATTTTT-ATCTCTGAAATCGAAAATA 2897
Score = 267 bits (144), Expect = 6e-70
Identities = 178/194 (92%), Gaps = 3/194 (2%)
Strand=Plus/Plus
Query 1 cttcttcttcttcttcttcttcttctttagttctataggtctctctattcttAACCCAAA 60
|||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct 9 CTTCTTCTTCTTCTTCTTCTTCTTCTTTAGTTCTTTAGGTTTCTCTACTCTTAACCCAAA 68
Query 61 TCCCCAAAAC---AAATGCCAAATCGAATCTATTTTCATCGTCCGCCAATTCCAAATGCC 117
||| |||||| |||||| ||||| ||||| |||||||||||| |||||||||||||||
Sbjct 69 TCCACAAAACTGCAAATGCTAAATCAAATCTGTTTTCATCGTCCCCCAATTCCAAATGCC 128
Query 118 AAACTCGTTCTCTTCTTCTGACCCATTTCTCAAAAATCTCAACGTTTCCTTCTTTCCACT 177
|||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||
Sbjct 129 AAACTCTTTCTCTTCTTCTGACCCATTTCTCAAAATTCTCAACTTTTCCTTCTTTTCACT 188
Query 178 GATTTGATTTCTCT 191
|||||| |||||||
Sbjct 189 GATTTGTTTTCTCT 202
> AT5G26910.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G58650.1);
Has 1322 Blast hits to 684 proteins in 162 species: Archae
- 4; Bacteria - 497; Metazoa - 157; Fungi - 101; Plants - 155;
Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink).
| chr5:9465929-9470403 REVERSE LENGTH=3404
Length=3404
Score = 863 bits (467), Expect = 0.0
Identities = 1331/1731 (77%), Gaps = 127/1731 (7%)
Strand=Plus/Plus
Query 327 AAATGGAGGTTGTTGAGAGGAAACGATCCAGAGGA-GGTTTTCTAAATATGTTTGATTGG 385
||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||
Sbjct 601 AAATGGAGGTTGTTGAGAGGAAACGATCCAGAGGAGGGTTTT-TAAATTTATTTGATTGG 659
Query 386 CCTGGTAAATCCCGGAAGAAGTTCTTCTCCTCTAACAGCAGCTCGA-AACTCTCCGAAGC 444
| ||| |||||||| |||||| |||||| | | ||||| ||| | ||||||| ||||
Sbjct 660 CATGGAAAATCCCGCAAGAAGCTCTTCT-C-C-GGCAGCACCTC-AGAACTCTCAGAAGA 715
Query 445 ATCAAAGCAAGAAAAACAAAATGCTCAAAACCCCTCAAAGTC-ATGGCCCTCTCCGATTG 503
|||||||| || | ||| ||||||| || ||||| | || |||| ||||
Sbjct 716 ATCAAAGC-AG-----C---CTGCACAAAACCTCTTGAAGTCGA-GGGTTTCTCTTATTG 765
Query 504 AGAG-GGATGAGATTGAAAAGAATTCAACTTACAATCC-GAGAAGTGACTCGAGTTGTTC 561
|| | |||||||||| ||||| ||||| | |||| || ||||||||||||||| ||||
Sbjct 766 AG-GTTGATGAGATTGGAAAGAGTTCAAGTAACAA-CCAGAGAAGTGACTCGAGCTGTTG 823
Query 562 AACATCCACTGCCACTAGTGATGATGGACAAGGGTCCAA-AGCTCCGAGTGTGATTGCGA 620
|||| | | || ||||||||||||| |||| ||| ||| ||||||||| ||||||
Sbjct 824 TGCATCTTCAGTAACCAGTGATGATGGAC-AGGGGACAAGAGCCCCGAGTGTGGTTGCGA 882
Query 621 GGCTCATGGGTTTAGAGTCTCTACCTGTACCAAATG-CCTTGGAGCCCCGGTC-TAATCC 678
|||| |||||||||||||||||||| |||||||||| || ||| || | | | ||||||
Sbjct 883 GGCTTATGGGTTTAGAGTCTCTACCGGTACCAAATGTCC-AGGAACCTC-GACTTAATCC 940
Query 679 TGATTTTGATCCATACTTCCTCAGATCC-TCACGCAAGAC-AAGCACATGGGATGCATAT 736
||| ||||||| | ||| |||||| || |||| || || || || |||||||||||||
Sbjct 941 CGATCTTGATCCGTTCTTACTCAGA-CCTTCACAAAACACTAA-CAGATGGGATGCATAT 998
Query 737 GAGAAT-TTGGGTTATGTAAATCTCCGCAGTGACTATGATGGTATTTCTTGGGACCATTT 795
|||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 999 GAGAATCTT-GGTTATGTAAATCTCCGTAGTGACTATGATGGTATTTCTTGGGACCATTT 1057
Query 796 GGATTCAAGAATGAATAAAGAGTGTAACCGGCCTATCGACCGCTTTCAAACCGAAACGTT 855
|||||| |||| |||||| | | | |||| || || || || ||||| | || || ||
Sbjct 1058 GGATTCTAGAACGAATAATGGGCGCAACCAACCGATTGAACGGTTTCAGTCTGAGACTTT 1117
Query 856 ACCTCCAAGGTCGGCTAAACCAATCCCTGTCACTCA-CAATAGGCTCTTGTCTCCTATCC 914
||||| ||||| |||||||| || ||| || || |||||| | | ||||||||||||
Sbjct 1118 TCCTCCCAGGTCAGCTAAACCGATATGTGTTAC-CAACAATAGACACCTGTCTCCTATCC 1176
Query 915 GAAGTCCTGGATTTGTTC-AGTCCAGGAACCCTGCTTCTGTAATGGAAGCAGCTTCGAGA 973
| |||||||| ||||| | | |||||||||||| || ||| |||||||| ||||| |||
Sbjct 1177 GGAGTCCTGGGTTTGTCCCA-TCCAGGAACCCTATTTATGTTATGGAAGCGGCTTCAAGA 1235
Query 974 ATGATTGAACCAAGTCCTCGGATAGTTGCTAAAACACGGTTTTCATCATCTGA-TTCCTC 1032
|||||||||||||||||| |||| ||||||| |||||||||||| |||| || ||| ||
Sbjct 1236 ATGATTGAACCAAGTCCTAGGATGGTTGCTAGAACACGGTTTTCGCCATC-GAATTC-TC 1293
Query 1033 -TTCATCACTTCCAATGAGGAT-CAGAGATTTGAA-AGAGAAACTAGAAGCTTCACAGAA 1089
||||||| |||| |||||||| || |||||| || ||||||| |||||||| |||||||
Sbjct 1294 CTTCATCAGTTCCTATGAGGATTCA-AGATTT-AAGAGAGAAATTAGAAGCTGCACAGAA 1351
Query 1090 AG-GACAAAGTCC-TCAAGTCTCTAATGGTACCTGCAACAATAAGTGCTTCA-GAGGAAA 1146
|| | | | | || |||| ||| |||| ||||| |||| ||||| | || | |||||
Sbjct 1352 AGTGTCTA-G-CCGTCAAAACTCCAATGATACCTTCAACCTTAAGTACC-CAAGTGGAAA 1408
Query 1147 GCA-AGATGAAAAGAGAACTACATTATCACTCAAGACACAAGAGA--TAAATAAGTT-AT 1202
||| | | || ||||||| |||| |||||||| ||||| | | || |||||| ||
Sbjct 1409 GCACA-ACGAGAAGAGAATTACAACATCACTCACGACACC-GTCAACTAG-TAAGTTCAT 1465
Query 1203 TGGGAGAAAGCAGGTT-TGGTGGTTCGAAGGGTAAAGTGAAGCCGCCCTCTGTATCTGCA 1261
|||| ||||||| | || ||||| |||||||||||||||||| | | |||||| |||
Sbjct 1466 GGGGA-AAAGCAG-TACTGATGGTTTGAAGGGTAAAGTGAAGCCATCTTATGTATCCGCA 1523
Query 1262 CATGCAAAGGCCAATACTATTCACAAGCGGGACAGTTCAGTGCTCTCAAGTGGCAACAG- 1320
|| ||||||||| ||| | || || | || |||| || | || | | |
Sbjct 1524 CAAGCAAAGGCCGGTAC-A---AC--GCC---C--TTAAGTG-TCACCAGAAACT-CTGC 1570
Query 1321 AGACCAAAAGAAGAAGGTGGAAACTAAGAACCGCATAGT-AA--G--A-AATGGTCTCAA 1374
| |||||||| |||||| || |||| || || |||| || | | |||| |||||
Sbjct 1571 AAACCAAAAGGAGAAGGCAGACGCTAAAAAGTGCGTAGTCAAAAGCCAGAATGCTCTCAG 1630
Query 1375 AGAATCTTCTGCTAGCACTAGGAAA-ACCGTGGATAAGCCA-AATAACCAGAAACAGAAC 1432
|| | || | ||||| | ||||| | || ||||| | ||||||||||||||||||
Sbjct 1631 AGGAGCTCCCATTAGCA-TGGGAAAGAATATGTTTAAGC-AGAATAACCAGAAACAGAAC 1688
Query 1433 --CA-ATTTG-C-----T--GAA-ACATCTGTTTCAAATCAGAGAGGCAGCAAAGTGA-T 1479
|| | | | || || ||||||| || || | | |||||||||| | |
Sbjct 1689 TGCAGAGACAACCAACCTTCGATGACCTCTGTTTTGAACCAAAAAAGCAGCAAAGTAAAT 1748
Query 1480 GAAGAAAGT---AAACAAGGTTTTGGTGGAAAGCGGAACTACAACTAAGAAGCCTGGTTT 1536
|| ||||| |||||||||| |||||||| ||| | | | | ||| || ||| ||
Sbjct 1749 -AACAAAGTTGTAAACAAGGTTCCAGTGGAAAGTGGATCGATATCAAAGCAGT-TGGGTT 1806
Query 1537 TA-CAGCAACATCAGCGGAAAAGAGCACTGCTTCATCCTTGTCCCGCAAAAAGAATCTTC 1595
|| || | | || |||||||||| ||| ||| ||| ||||| |||||||||| |||||
Sbjct 1807 TATCAACGGCCTCGGCGGAAAAGAATACTTCTTTATCTTTGTCACGCAAAAAGACTCTTC 1866
Query 1596 CCCGCAACAAAAAA-TCGGCAAATGGGGTGCAAGAAGCTGGAGTCAACAG-TGATAAACG 1653
|||| | |||||| || |||||||| ||||| || ||||| || | | |||||||||
Sbjct 1867 CCCGGAGCAAAAAGCTCC-CAAATGGGATGCAAAAATCTGGAATCT-CTGATGATAAACG 1924
Query 1654 GATGAAAAAGG-GTGAGAAGT-TGATAAAATGTAACATCACCGTTGATGGCGGGTTGAAG 1711
|| |||| || | || || | |||| ||||||||||||||| ||||||| || |||||
Sbjct 1925 GACCAAAA-GGAGCGAAAA-TATGATCAAATGTAACATCACCATTGATGGTGGCTTGAAC 1982
Query 1712 TCAGGGGACGATGATCG-AAAGAAGGACATGGATGTGATTTCGTTCACTTTCTCATCTCC 1770
||| | |||||||| ||| ||||| |||||||||||||| ||||| |||||||||||
Sbjct 1983 AAAGGTAAAGATGATCGGAAA-AAGGAAATGGATGTGATTTCATTCACATTCTCATCTCC 2041
Query 1771 GATCAAAGGTTTATCATCCAATTCGCGATCCTCCA-TCAAAAAGACTGATCAAGATACAG 1829
|||||||||||||| || |||| |||||| | |||| | | || |||||| ||||
Sbjct 2042 CATCAAAGGTTTATCTTCTGATTCATTATCCTCTACTCAAGGA-ATTGGTCAAGACACAG 2100
Query 1830 AATCAGCACTTAGTTTCAATAAGATAGACAGTGATTCTCT-AAATTTTCTGTTGGAGAAA 1888
| || ||| |||||||||||| | | | | ||||| || |||| |||||||||| ||
Sbjct 2101 ACTCTGCAGTTAGTTTCAATAT--TGG-CGGCGATTC-CTTAAATGCTCTGTTGGAGCAA 2156
Query 1889 AAGCTCAGAGAGCTAACTTCTAAGATTGAGTCATCTTGCAGTAGTCTGACCCAAGAAGAA 1948
|||||||||||||| ||||||||| ||||||| ||| || |||| ||||||||||||||
Sbjct 2157 AAGCTCAGAGAGCTGACTTCTAAGCTTGAGTCTTCTAGCTGTAGCCTGACCCAAGAAGA- 2215
Query 1949 GAGTCTTCGGGTTCCATTACAAAGGATTGGG-TGAATGGGACGATATCATT 1998
| |||| ||||||| ||| |||| | | |||| |||| ||| |||||
Sbjct 2216 GC--CTTCATATTCCATTCCAATGGAT-GAGATGAACGGGATGATTTCATT 2263
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 141219944545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5