BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477873 Length=2823 Score E Sequences producing significant alignments: (Bits) Value AT3G05790.1 | Symbols: LON4 | lon protease 4 | chr3:1720154-172... 4416 0.0 AT3G05780.1 | Symbols: LON3 | lon protease 3 | chr3:1714941-171... 1262 0.0 AT5G26860.1 | Symbols: LON_ARA_ARA, LON1 | lon protease 1 | chr... 1225 0.0 > AT3G05790.1 | Symbols: LON4 | lon protease 4 | chr3:1720154-1725182 REVERSE LENGTH=2829 Length=2829 Score = 4416 bits (2391), Expect = 0.0 Identities = 2696/2841 (95%), Gaps = 30/2841 (1%) Strand=Plus/Plus Query 1 ATGCTGAAGCTTCTCACTCCGA---C---CGCTTCCCATCACGTGACTCCGGCTATTCGA 54 ||||||||| |||||||||||| | |||||||||||||||||||||||||| |||| Sbjct 1 ATGCTGAAGTTTCTCACTCCGACTGCTTACGCTTCCCATCACGTGACTCCGGCTACTCGA 60 Query 55 TTCCGGTCTACCCCGGTTAAGAGTCTATTGTTTAAGCAACTGACTCTGCTAACCGGATGG 114 |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||| Sbjct 61 TTCCGGTCTACCCCGGTTAAGAATCTATTGTTCAAGCAACTGACTCTTCTAACCGGATGG 120 Query 115 AACCGGAGTTCCTACGAATTGGGTCGTCGTTCTTTTTCCTCCGAGTTGGATTCCGACGCG 174 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 121 AACCGGAGTTCCTACGAATTGGGTCGTCGTTCTTTTTCCTCCGACTTGGATTCCGACAC- 179 Query 175 AAATCCTCAGCAACGACGACTGTCTCAACTAAACCTCACCTCGACGATTGTCTAACGGTT 234 ||| || |||| || ||||||||| ||||||||||||| |||||||||||||||||| Sbjct 180 AAA--GTCTTCAACTACTACTGTCTCAGCTAAACCTCACCTGGACGATTGTCTAACGGTT 237 Query 235 ATAGCATTGCCATTGCCTCACAAGCCTCTTATTCCTGGCTTTTACATGCCAATCTATGTC 294 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 238 ATAGCATTGCCATTGCCCCACAAGCCTCTTATTCCTGGCTTTTACATGCCAATATATGTC 297 Query 295 AAGGATCCTAAAGTTCTTGCAGCTTTACAAGAGAGCAGAAGACAACAAGCTTTATATGCG 354 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct 298 AAGGATCCTAAAGTTCTTGCAGCTTTACAAGAGAGTAGAAGACAACAAGCTCCATATGCA 357 Query 355 GGGGCTTTCCTTTTCAAGGATGACGCGTCAACTGACTCATCTTCTAGCTCTGAAACTGAG 414 |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 358 GGGGCTTTCCTTTTGAAGGATGACGCGTCATCTGACTCATCTTCGAGCTCTGAAACTGAG 417 Query 415 AATATTCTAGAGAAGTTGAAAGGAAAAGAGTTGCTTTACCGGATTCATGAAGTTGGCACA 474 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 418 AATATTCTAGAGAAGTTGAAAGGAAAAGAGTTGATTAACCGGATTCATGAAGTTGGCACA 477 Query 475 CTTGCTAAGATTTCAAGTATCCAAGGTGAGCAAGTCATCCTCATTGGCCGCAGACGACTT 534 ||||| |||||||||||||||||||||||||||||||||| ||||| | ||||| |||| Sbjct 478 CTTGCCCAGATTTCAAGTATCCAAGGTGAGCAAGTCATCCTTATTGGTCACAGACAACTT 537 Query 535 CGAATAACAGAGA---TG-GT--GAGTGAAGATCCTCTAACCGTAAAAGTTGACCATCTA 588 ||||||||||||| || || |||||||||||| |||||||| ||||||||||||||| Sbjct 538 CGAATAACAGAGATGGTGAGTGAGAGTGAAGATCCCCTAACCGTCAAAGTTGACCATCTA 597 Query 589 AAGGATAAGCCATATGACAAGGACGATGATGTCATCAAGGCAACATACTTTCAAGTTATG 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 598 AAGGATAAGCCATATGACAAGGACGATGATGTCATCAAGGCAACATACTTTCAAGTGATG 657 Query 649 TCGACACTTAGGGATGTTTTAAAGACAACTTCACTCTGGAGAGATCAAGTTCGGACATAT 708 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 658 TCGACACTTAGGGATGTCTTAAAGACAACTTCACTCTGGAGAGATCATGTTCGGACATAT 717 Query 709 ACCCAGGCATGTTCTCTTCATATCTGGCACAGCTTGCGACATATAGGTGAATTCAATTAT 768 ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| Sbjct 718 ACCCAGGCATGTTCTCTTCATATTTGGCACTGCTTGAGACATATAGGTGAATTCAATTAT 777 Query 769 CCAAGGTTAGCCGATTTTGGAGCCGGGATCTCTGGCGCTAACAAACATCAAAATCAGGGG 828 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 778 CCAAAGTTAGCCGATTTTGGAGCTGGGATCTCTGGCGCTAACAAACATCAAAATCAGGGG 837 Query 829 GTTCTTAAAGAACTGGATGTTCATAAACGTCTGGAGTTGACGCTGGAATTGGTGAAAAAA 888 |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 838 GTTCTTGAAGAACTGGATGTTCACAAACGTCTAGAGTTGACGCTGGAATTGGTGAAAAAA 897 Query 889 GAAGTTGAAATTAACAAGATTCAAGAATCCATAGCAAAAGCTGTTGAAGAAAAATTTAGT 948 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 898 GAAGTTGAAATTAACAAGATTCAAGAATCCATAGCAAAAGCTGTTGAAGAAAAATTTAGT 957 Query 949 GGCGACAGACGTCGTATCATACTAAAGGAGCAGATCAATGCTATAAAAAAGGAGCTTGGC 1008 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 GGCGATAGACGTCGTATCATACTAAAGGAGCAGATCAATGCTATAAAAAAGGAGCTTGGC 1017 Query 1009 GTGGAGACAGACAACAAATCTGCACTTTCTGAAAAGTTTAGGGGGAGGGTTGACCCTATT 1068 | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1018 GGGGAGACAGACAGCAAATCTGCACTTTCTGAAAAGTTTAGGGGGAGGATTGACCCTATT 1077 Query 1069 AAAGACAAGATTCCAGAACATGTACTAAAAGTCATAGAAGAAGAGCTTAAAAAACTGCAG 1128 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 AAAGACAAGATTCCAGGACATGTACTAAAAGTCATAGAAGAAGAGCTTAAAAAACTGCAG 1137 Query 1129 CTGTTAGAAACCAGTTCCAGCGAATACGATGTGACCTATAACTACCTTGATTGGTTGACC 1188 ||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||||| Sbjct 1138 CTGTTAGAAACCAGTTCTAGCGAATTCGATGTGACTTGTAACTACCTTGATTGGTTGACC 1197 Query 1189 GTGCTGCCTTGGGGAAAATTCAGTGATGAGAATTTTGATGTCCTACGGGCAGAAAAGATT 1248 ||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct 1198 GTGTTGCCTTGGGGAAATTTCAGTGATGAGAATTTTAATGTCCTACGGGCAGAAAAGATT 1257 Query 1249 CTTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATACTAGAGTTTATTGCT 1308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1258 CTTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATACTAGAGTTTATTGCT 1317 Query 1309 GTGGGAAGACTTAGAGGCACTTCACAAGGGAAGATCATTTGTCTCTCTGGCCCACCTGGA 1368 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1318 GTGGGAGGACTTAGAGGCACTTCACAAGGGAAGATCATTTGTCTCTCTGGCCCAACTGGA 1377 Query 1369 GTAGGTAAAACTAGCATTGGGCGTTCCATTGCACGTGCTCTTGACCGCAAGTTCTTCCGG 1428 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1378 GTAGGTAAAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGG 1437 Query 1429 TTCTCTGTTGGAGGACTATCCGATGTTGCTGAGATTAAGGGGCATCGTCGAACATATATT 1488 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1438 TTCTCTGTTGGAGGACTATCCGATGTTGCTGAGATTAAGGGGCATCGTCGAACGTATATT 1497 Query 1489 GGTGCCATGCCTGGAAAGATGGTGCAATGTCTAAAGAATGTGGGAACAGAAAATCCTCTT 1548 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1498 GGTGCCATGCCTGGAAAGATGGTGCAGTGTCTAAAGAATGTGGGAACAGAAAATCCTCTT 1557 Query 1549 GTTCTGATCGATGAGATTGATAAGCTTGGAGTTAGGTGCCACGATGGCGACCCAGCCAGT 1608 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 1558 GTTCTGATCGATGAGATTGATAAGCTTGGAGTTAGGGGCCACCATGGCGACCCAGCCAGT 1617 Query 1609 GCAATGTTGGAGCTTTTGGATCCAGAGCAAAATGCAAACTTTCTAGACCACTATCTCAAT 1668 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || Sbjct 1618 GCAATGTTGGAGCTTTTGGATCCAGAGCAGAATGCAAATTTTCTAGACCACTATCTCGAT 1677 Query 1669 GTTACTATTGACTTATCCAAGGTTTTATTTGTATGCACAGCAAACGTGACAGATACCATT 1728 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1678 GTTCCTATTGACTTATCCAAGGTTTTATTTGTATGCACAGCAAACGTGACAGATACCATT 1737 Query 1729 CCGAGTCCCCTGCTAGACAGAATGGAGGTGATTACTCTCTCAGGGTACATTACTGATGAG 1788 ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1738 CCGGGTCCTCTGCTAGACAGAATGGAGGTGATCACTCTCTCAGGGTACATTACTGATGAG 1797 Query 1789 AAAATGCATATTGCTAGAGACTATTTGGTGAAAACTGCACGCAGAGATTGTGGCATTAAG 1848 ||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct 1798 AAAATGCATATCGCTAGAGACTATTTGGAGAAAACCGCACGCAGAGATTGTGGCATTAAG 1857 Query 1849 CCTGAACAGGTTGATGTGAGCGATGCAGCTCTTCTTTCCTTGATAGAAAATTACTGCAGA 1908 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 1858 CCTGAACAGGTTGATGTGAGCGATGCAGCTTTTCTTTCCTTGATAGAACATTACTGCAGA 1917 Query 1909 GAAGCAGGAGTTAGAAATCTCCAGAAGCAGATAGAGAAGGTTTTTCGTAAGATTGCTCTT 1968 |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 1918 GAAGCAGGAGTTAGAAATCTCCAGAAGCAGATTGAGAAGATTTTTCGTAAGATTGCTCTT 1977 Query 1969 AAACTTGTGCGCAAAGGGGCAGCATCAGCCGAAGTGCCT-GCAATTTCTGATGATGTTAC 2027 |||||||| ||||||| |||| | || ||||||||||| | |||||||||||||||||| Sbjct 1978 AAACTTGTTCGCAAAGCGGCATC--CA-CCGAAGTGCCTAG-AATTTCTGATGATGTTAC 2033 Query 2028 TACTGACAATGGAGATACTAAATCTGTGGCCAAGACTGATTTGGAATCCCCAGAGACCTC 2087 |||||||| || ||| ||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 2034 TACTGACACTGAAGAAACTAAATCTTTGGCCAAGACTGATTTGGAATCTCCAGAGACCTC 2093 Query 2088 TGCAGACGGATCCACCGTGTTGACAGATGAGTTGGCAACTGGTGA-CACAAAAGAATCAA 2146 |||||| |||||||| |||||||||||||||||||||||||| || | ||| |||||||| Sbjct 2094 TGCAGAAGGATCCACTGTGTTGACAGATGAGTTGGCAACTGGGGATC-CAACAGAATCAA 2152 Query 2147 AGACTGAGCAGAGCGGAGA-G-AGCGGAGA-GGTAGCTGAAAAGTTTATGATTGATGAAT 2203 |||||||||||||||||| | ||| || | ||| |||||||| |||||||||||||| Sbjct 2153 CGACTGAGCAGAGCGGAGAGGTAGCTGAAACGGT---TGAAAAGTATATGATTGATGAAT 2209 Query 2204 CAAACCTTTCAGATTATATAGGCAAGCCAGTATTCCAGGCAGAGAAGATATATGAACAGA 2263 ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct 2210 CAAACCTTTCAGATTATGTAGGCAAGCCAGTATTCCAGGAAGAGAAGATATATGAGCAGA 2269 Query 2264 CACCAGTCGGGGTTGTAATGGGTCTAGCTTGGACATCCATGGGGGGCTCAACATTGTACA 2323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2270 CACCAGTCGGGGTTGTAATGGGTCTAGCTTGGACATCCATGGGGGGCTCAACATTGTACA 2329 Query 2324 TAGAGACAACCTTTGTAGAAGAAGGAGAAGGCAAAGGTGGTCTTCATATAACGGGTCGGC 2383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2330 TAGAGACAACCTTTGTAGAAGAAGGAGAAGGCAAAGGTGGTCTTCATATAACGGGTCGGC 2389 Query 2384 TTGGGGATGTGATGAAAGAAAGCGCAGAGATTGCTCACACAGTCGCCAGAAGAATAATGC 2443 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 2390 TTGGGGATGTGATGAAAGAAAGCGCAGAGATAGCTCACACAGTCGCGAGAAGAATAATGC 2449 Query 2444 TGGAGAAAAAACCGGAGAACAAGTTCTTTGCGAATTCCAAGCTTCATTTACATGTACCTG 2503 |||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 2450 TGGAGAAAGAACCCGAGAACAAGTTGTTTGCGAATTCCAAGCTTCATCTACATGTACCTG 2509 Query 2504 CAGGAGCCACTCCAAAAGACGGTCCAAGCGCAGGCTGCACCATGATAACTTCATTGCTAT 2563 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2510 CAGGAGCCACACCAAAAGACGGCCCAAGCGCAGGCTGCACCATGATAACTTCATTGCTAT 2569 Query 2564 CACTTGCCTCGAAGAAGCCAGTAAGGAAGGATCTTGCAATGACCGGAGAAGTCACTTTGA 2623 ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 2570 CACTTGCCTTGAAGAAGCCTGTAAGGAAGGATCTTGCAATGACTGGAGAAGTCACTTTGA 2629 Query 2624 CGGGTAGAATTCTTGCAATTGGCGGCGTGAAAGAGAAGACAATAGCTGCAAAACGGAGTC 2683 | |||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||| Sbjct 2630 CCGGTAGAATCCTTGCGATTGGCGGCGTGAAAGAGAAGACTATAGCTGCAAGACGGAGTC 2689 Query 2684 AAGTGAAGGTGATAATATTCCCGGAGGCTAACCGGCGAGATTTTGATGAGCTGGCG-GAA 2742 |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| Sbjct 2690 AAGTGAAGGTGATAATATTCCCTGAGGCTAACCGGAGAGATTTTGATGAGCTGGCGAGAA 2749 Query 2743 AACGTGAAAGAAGGGCTCGAAGTTCATTTCGTGAATGAATATGAGCAGATTTTCGAGCTA 2802 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2750 A-CGTGAAAGAAGGGCTCGAAGTTCATTTCGTGGATGAATATGAGCAGATTTTCGAGCTA 2808 Query 2803 GCCTTTGGCTATGACCATTAG 2823 ||||||||||||||||||||| Sbjct 2809 GCCTTTGGCTATGACCATTAG 2829 > AT3G05780.1 | Symbols: LON3 | lon protease 3 | chr3:1714941-1719608 REVERSE LENGTH=2775 Length=2775 Score = 1262 bits (683), Expect = 0.0 Identities = 886/984 (90%), Gaps = 13/984 (1%) Strand=Plus/Plus Query 1012 GAGACAGACAACAAATCTGCACTTTCTGAAAAGTTTAGGGGGAGGGTTGACCCTATTAA- 1070 |||||||| || |||| ||||||||| |||| | |||| ||| |||| ||| || Sbjct 994 GAGACAGATGACGGATCTTCACTTTCTGCAAAGATAAGGGTAAGGATTGATACTA-AAAG 1052 Query 1071 AGACAAGATTCCAGAACATGTACTAAAAGTCATAGAAGAAGAGCTTAAAAAACTGCAGCT 1130 |||||| |||||| |||||||| |||||||||| ||||||||| ||| ||| ||| || | Sbjct 1053 AGACAAAATTCCAAAACATGTAATAAAAGTCATGGAAGAAGAGTTTACAAAGCTGGAGAT 1112 Query 1131 GTTAGAA-ACCAGTTCCAGCGAATACGATGTGACCTATAACTACCTTGATTGGTTGACCG 1189 ||||||| | | | ||||| | |||| ||||||||||||||||| |||||||||||| Sbjct 1113 GTTAGAAGA-AAACTATAGCGACTTCGATTTGACCTATAACTACCTTCATTGGTTGACCG 1171 Query 1190 TGCTGCCTTGGGGAAAATTCAGTGATGAGAATTTTGATGTCCTACGGGCAGAAAAGATTC 1249 |||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| Sbjct 1172 TGCTGCCTTGGGGAAATTTCAGTTATGAGAATTTTGATGTCCTACGGGCAAAAAAGATTC 1231 Query 1250 TTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATACTAGAGTTTATTGCTG 1309 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1232 TTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATATTAGAGTTTATTGCTG 1291 Query 1310 TGGGAAGACTTAGAGGCACTTCACAAGGGAAGATCATTTGTCTCTCTGGCCCACCTGGAG 1369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1292 TGGGAAGACTTAGAGGCACTTCACAAGGGAAGATCATTTGTCTCTCTGGCCCACCTGGAG 1351 Query 1370 TAGGTAAAACTAGCATTGGGCGTTCCATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGT 1429 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1352 TAGGTAAAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGT 1411 Query 1430 TCTCTGTTGGAGGACTATCCGATGTTGCTGAGATTAAGGGGCATCGTCGAACATATATTG 1489 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| Sbjct 1412 TCTCTGTTGGAGGACTATCCGATGTTGCTGAGATTAAGGGGCATTGTCAAACATATGTTG 1471 Query 1490 GTGCCATGCCTGGAAAGATGGTGCAATGTCTAAAGAATGTGGGAACAGAAAATCCTCTTG 1549 |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 1472 GTGCCATGCCTGGAAAGATGGTGCAATGTCTAAAGAGTGTGGGAACAGCAAATCCTCTTA 1531 Query 1550 TTCTGATCGATGAGATTGATAAGCTTGGAGTTAGGTGCCACGA-TGGCGACCCAGCCAGT 1608 || || |||| ||||||||||||||||| | ||||||||| | |||||||||||||||| Sbjct 1532 TTTTGTTCGACGAGATTGATAAGCTTGG--T-AGGTGCCAC-ACTGGCGACCCAGCCAGT 1587 Query 1609 GCAATGTTGGAGCTTTTGGATCCAGAGCAAAATGCAAACTTTCTAGACCACTATCTCAAT 1668 || |||||||| || ||||||||||||| |||||||| ||| ||||||||| ||||||| Sbjct 1588 GCGTTGTTGGAGGTTATGGATCCAGAGCAGAATGCAAAATTTTTAGACCACTTTCTCAAT 1647 Query 1669 GTTACTATTGACTTATCCAAGGTTTTATTTGTATGCACAGCAAACGTGACAGATACCATT 1728 ||||||||||||||||| |||||||||||||||||||| ||||| |||| ||| | ||| Sbjct 1648 GTTACTATTGACTTATCAAAGGTTTTATTTGTATGCACTGCAAATGTGATAGAAATGATT 1707 Query 1729 CCGAGTCCCCTGCTAGACAGAATGGAGGTGATT-ACTCTCTCAGGGTACATTACTGATGA 1787 ||| |||| |||||||||||||||||||||||| | |||||| ||||| |||||||||| Sbjct 1708 CCGGGTCCTCTGCTAGACAGAATGGAGGTGATTGA-TCTCTCTGGGTATGTTACTGATGA 1766 Query 1788 GAAAATGCATATTGCTAGAGACTATTTGGTGAAAACTG-CACGCAGAGATTGTGGCATTA 1846 ||||||||||||||||||||||||||||||||||| | || |||||||||| ||||||| Sbjct 1767 GAAAATGCATATTGCTAGAGACTATTTGGTGAAAAA-GACATGCAGAGATTGCGGCATTA 1825 Query 1847 AGCCTGAACAGGTTGATGTGAGCGATGCAGCTCTTCTTTCCTTGATAGAAAATTACTGCA 1906 |||||||||| |||||| |||| |||||||||||||||||||||||||||||||| || | Sbjct 1826 AGCCTGAACATGTTGATTTGAGTGATGCAGCTCTTCTTTCCTTGATAGAAAATTATTGTA 1885 Query 1907 GAGAAGCAGGAGTTAGAAATCTCCAGAAGCAGATAGAGAAGGTTTTTCGTAAGATTGCTC 1966 ||||||||||||||||||||||||| |||||||| |||||| ||| |||||| |||||| Sbjct 1886 GAGAAGCAGGAGTTAGAAATCTCCAAAAGCAGATTGAGAAGATTTACCGTAAGGTTGCTC 1945 Query 1967 TTAAACTTGTGCGCAAAGGGGCAG 1990 || |||| || ||| |||| |||| Sbjct 1946 TTGAACTAGTACGCCAAGGAGCAG 1969 Score = 793 bits (429), Expect = 0.0 Identities = 616/707 (87%), Gaps = 10/707 (1%) Strand=Plus/Plus Query 2122 GCAACTGGTGACACAAAAGAATCAAAGACTGAGCAGAGCGGA--GAG-AGCGGAGAGGTA 2178 |||||||| ||| ||| ||||||||||||| ||||||||||| | | ||| | | | Sbjct 2074 GCAACTGGGGACTCAACAGAATCAAAGACTAAGCAGAGCGGATTG-GTAGCTAAAACCT- 2131 Query 2179 GCTGAAAAGTTTATGATTGATGAATCAAACCTTTCAGATTATATAGGCAAGCCAGTATTC 2238 ||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||| Sbjct 2132 -TTGAAAAGGTTATGATTGATGAATCAAACCTTGCAGATTACGTAGGCAAACCAGTATTC 2190 Query 2239 CAGGCAGAGAAGATATATGAACAGACACCAGTCGGGGTTGTAATGGGTCTAGCTTGGACA 2298 |||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 2191 CAGGAAGAGAAGATCTATGAACAGACACCTGTCGGGGTTGTGATGGGTCTAGCTTGGACA 2250 Query 2299 TCCATGGGGGGCTCAACATTGTACATAGAGACAACCTTTGTAGAAGAAGGAGAAGGCAAA 2358 |||||||| |||||||| |||||||| |||||||||||||||||||||||| || ||| Sbjct 2251 TCCATGGGTGGCTCAACGTTGTACATCGAGACAACCTTTGTAGAAGAAGGATTGGGAAAA 2310 Query 2359 GGTGGTCTTCATATAACGGGTCGGCTTGGGGATGTGATGAAAGAAAGCGCAGAGATTGCT 2418 |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct 2311 GGTGGTCTTCATATAACGGGTCAGCTTGGGGATGTGATGAAAGAAAGCGCACAGATTGCT 2370 Query 2419 CACACAGTCGCCAGAAGAATAATGCTGGAGAAAAAACCGGAGAACAAGTTCTTTGCGAAT 2478 ||||||||||| |||||||||||| | |||||| ||||||||||| || ||||||||| Sbjct 2371 CACACAGTCGCTAGAAGAATAATGTTTGAGAAAGAACCGGAGAACCTCTTTTTTGCGAAT 2430 Query 2479 TCCAAGCTTCATTTACATGTACCTGCAGGAGCCACTCCAAAAGACGGTCCAAGCGCAGGC 2538 |||||||||||||||||||| |||| ||||||||| |||||||| || ||||| |||||| Sbjct 2431 TCCAAGCTTCATTTACATGTTCCTGAAGGAGCCACACCAAAAGATGGCCCAAGTGCAGGC 2490 Query 2539 TGCACCATGATAACTTCATTGCTATCACTTGCC-TCGAAGAAGCCAGTAAGGAAGGATCT 2597 ||||||||||| ||||| || |||||||||||| | |||||||| |||||||||||||| Sbjct 2491 TGCACCATGATCACTTCGTTCCTATCACTTGCCAT-GAAGAAGCTTGTAAGGAAGGATCT 2549 Query 2598 TGCAATGACCGGAGAAGTCACTTTGACGGGTAGAATTCTTGCAATTGGCGGCGTGAAAGA 2657 ||||||||| |||||||||||| | || |||||||||||| ||||||| ||||| || || Sbjct 2550 TGCAATGACTGGAGAAGTCACTCTAACTGGTAGAATTCTTCCAATTGGTGGCGTTAAGGA 2609 Query 2658 GAAGACAATAGCTGCAAAACGGAGTCA-AGTGAAGGTGATAATATTCCCGGAGGCTAACC 2716 |||||| |||||||||| ||||||||| | | ||| |||||||||||||| || || | Sbjct 2610 GAAGACTATAGCTGCAAGACGGAGTCAGA-TCAAGACAATAATATTCCCGGAAGCAAATC 2668 Query 2717 GGCGAGATTTTGATGAGCTGGCGGAAAACGTGAAAGAAGGGCTCGAAGTTCATTTCGTGA 2776 || |||| ||||| ||||| ||||||||| ||||||||||||| || ||||| |||||| Sbjct 2669 GGAGAGACTTTGAGGAGCTTGCGGAAAACATGAAAGAAGGGCTTGATGTTCACTTCGTGG 2728 Query 2777 ATGAATATGAGCAGATTTTCGAGCTAGCCTTTGGCTATGACCATTAG 2823 ||||||||||| |||| ||||| ||||| || |||||||||||| Sbjct 2729 ATGAATATGAGAAGATATTCGATCTAGCATTCAATTATGACCATTAG 2775 Score = 333 bits (180), Expect = 6e-90 Identities = 236/263 (90%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 437 GAAAAGAGTTGCTTTACCGGATTCATGAAGTTGGCACACTTGCTAAGATTTCAAGTATCC 496 |||||||||||||| |||| ||||| |||||||||| |||||| ||||||||||||||| Sbjct 569 GAAAAGAGTTGCTTAACCGTATTCACCAAGTTGGCACTCTTGCTCAGATTTCAAGTATCC 628 Query 497 AAGGTGAGCAAGTCATCCTCATTGGCCGCAGACGACTTCGAATA-ACAGAGATGGTGAGT 555 ||||||||||||||||||| |||| |||||| ||||| |||| | ||||||||||||| Sbjct 629 AAGGTGAGCAAGTCATCCTTGTTGGTCGCAGAAGACTTATAATAGA-AGAGATGGTGAGT 687 Query 556 GAAGATCCTCTAACCGTAAAAGTTGACCATCTAAAGGATAAGCCATATGACAAGGACGAT 615 ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| || Sbjct 688 GAAGATCCTCTAACCGTCAGAGTTGACCATCTAAAGGATAAGCCATATGACAAGGACAAT 747 Query 616 GATGTCATCAAGGCAA-CATACTTTCAAGTTATGTCGACACTTAGGGATGTTTTAAAGAC 674 | |||||||||||||| | ||| || ||||||| ||||| |||||||| || |||||||| Sbjct 748 GCTGTCATCAAGGCAAGC-TACGTTGAAGTTATTTCGACTCTTAGGGAAGTCTTAAAGAC 806 Query 675 AACTTCACTCTGGAGAGATCAAG 697 || |||||||||||||||||||| Sbjct 807 AAATTCACTCTGGAGAGATCAAG 829 Score = 327 bits (177), Expect = 3e-88 Identities = 342/417 (82%), Gaps = 30/417 (7%) Strand=Plus/Plus Query 41 CTCCGGCTATTC-GATTCCGG-TCTACCCCGGTTAAGAGTCTA-T--TGTTTA-AGCAAC 94 |||||||||||| || | ||| || | |||||| |||||||| | | || | || || Sbjct 134 CTCCGGCTATTCGGA-T-CGGATCCAATCCGGTTCAGAGTCTACTACTCTTCAGGGC-AC 190 Query 95 TGACTCTGCTAACCGGATGGAACCGGAGTTCCT-ACGA---ATTGGGTCGTCGTTCTTT- 149 ||||| ||| ||||||||||||||||||| || ||| |||||||||||| | ||| Sbjct 191 CGACTCAGCTTACCGGATGGAACCGGAGTT-CTCGCGATTTATTGGGTCGTCG-TGTTTC 248 Query 150 TTCCTCCGAGTTGGA-TTCCGACG-CGAAATC-CTCAGCAAC--GA-CGACTGTCTCAAC 203 || |||||| | | | | || | || ||| || | | | | ||| | ||||||| Sbjct 249 TTTCTCCGA-TCGCAGTGACGGTGTCG--ATCTCTTATCTTCTTCACCGATTCTCTCAAC 305 Query 204 TAAACCTCACCTCGACGATTGTCTAACGGTTATAGCATTGCCATTGCCTCACAAGCCTCT 263 ||| ||| |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| Sbjct 306 TAACCCTAACCTCGACGATTCTCTAACGGTTATAGCATTGCCGTTGCCTCACAAACCTCT 365 Query 264 TATTCCTGGCTTTTACATGCCAATCTATGTCAAGGATCCTAAAGTTCTTGCAGCTTTACA 323 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 366 TATTCCTGGCTTTTACATGCCAATCCATGTCAAGGATCCTAAAGTTCTTGCAGCTTTACA 425 Query 324 AGAGAGCAGAAGACAACAAGCTTTATATGCGGGGGCTTTCCTTTTCAAGGAT-GACGCGT 382 |||||||| |||||||||| || ||||| ||||||||||||||| |||||| | ||||| Sbjct 426 AGAGAGCACAAGACAACAATCTCCATATGTGGGGGCTTTCCTTTTGAAGGATTG-CGCGT 484 Query 383 CAACTGACTCATCTTCTAGCTCTGAAACTGA-GA-A-TATTCTAGAGAAGTTGAAAG 436 | ||||| ||||||||| ||||||||||||| || | | || | |||||||| |||| Sbjct 485 CTACTGATTCATCTTCTCGCTCTGAAACTGAAGATAATGTTGTTGAGAAGTTTAAAG 541 Score = 230 bits (124), Expect = 8e-59 Identities = 153/167 (92%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 749 ATATAGGTGAATTCAATTATCCAA-GGTTAGCCGATTTTGGAGCCGGGATCTCTGGCGCT 807 |||||||||| |||| |||| ||| ||||| ||||||||||||||||||||||||||| Sbjct 830 ATATAGGTGACTTCAGTTAT-CAACATTTAGCTGATTTTGGAGCCGGGATCTCTGGCGCT 888 Query 808 AACAAACATCAAAATCAGGGGGTTCTTAAAGAACTGGATGTTCATAAACGTCTGGAGTTG 867 ||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 889 AACAAACATAAAAATCAGGGGGTTCTTACAGAACTGGATGTTCATAAACGTCTAGAGTTG 948 Query 868 ACGCTGGAATTGGTGAAAAAAGAAGTTGAAATTAACAAGATTCAAGA 914 ||| ||||||||||||||||| |||| ||||||||||||||| |||| Sbjct 949 ACGTTGGAATTGGTGAAAAAACAAGTAGAAATTAACAAGATTAAAGA 995 > AT5G26860.1 | Symbols: LON_ARA_ARA, LON1 | lon protease 1 | chr5:9451048-9457000 FORWARD LENGTH=3327 Length=3327 Score = 1225 bits (663), Expect = 0.0 Identities = 1078/1277 (84%), Gaps = 34/1277 (3%) Strand=Plus/Plus Query 748 CATATAGGTGAATTCAATTATCCAAGGTTAGCCGATTTTGGAGCCGG-GATCTCTGGCGC 806 ||||||||||| |||| ||||||| | |||| |||||||||| ||| ||| | |||||| Sbjct 916 CATATAGGTGATTTCACTTATCCACGACTAGCTGATTTTGGAG-CGGCGATATGTGGCGC 974 Query 807 TAACAAACATCAAAATCAGGGGGTTCTTAAAGAACTGGATGTTCATAAACGTCTG-GAGT 865 || | |||||| ||| | |||||| |||||||||||||||| ||||||||| | || Sbjct 975 AAATAGGCATCAAGCTCAAGAAGTTCTTGAAGAACTGGATGTTCACAAACGTCTGCG-GT 1033 Query 866 TGACGCTGGAATTGGTGAAAAAAGAAGTTGAAATTAACAAGATTCAAGAATCCATAGCAA 925 |||||||||||||| ||||||||||| | ||||||| |||||| || ||| ||||||||| Sbjct 1034 TGACGCTGGAATTGATGAAAAAAGAAATGGAAATTAGCAAGATACAGGAAACCATAGCAA 1093 Query 926 AAGCTGTTGAAGAAAAATTTAGTGGCGA-CAGACGTCG-TATCATACTAAAGGAGCAGAT 983 |||| ||||||||||| |||| || || || |||||| || | | ||||| |||||| | Sbjct 1094 AAGCAATTGAAGAAAAAATTAGCGGTGAGCA-ACGTCGTTA-CTTGCTAAATGAGCAGCT 1151 Query 984 CAATGCTATAAAAAAGGAGCTTGGCGTGGAGACAGACAACAAATCTGCACTTTCTGAAAA 1043 ||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||| Sbjct 1152 CAAGGCTATAAAGAAGGAGCTTGGTGTGGAGACAGATGACAAATCTGCACTTTCTGCAAA 1211 Query 1044 GTTTAGGGGGAGGGTTGACCCTATTAAAGACAAGATTCCAGAACATGTACTAAAAGTCAT 1103 ||||| || ||| |||| |||| || || || ||||||| |||||| || ||||||| Sbjct 1212 GTTTAAGGAAAGGATTGAGCCTAACAAGGAAAAAATTCCAGCGCATGTATTACAAGTCAT 1271 Query 1104 AGAAGAAGAGCTTAAAAAACTGCAGCTGTTAGAAACCAGTTCCAGCGAATACGATGTGAC 1163 |||||||||||||| ||| |||||||||||||| | ||||| ||||| | | ||||| Sbjct 1272 AGAAGAAGAGCTTACAAAGCTGCAGCTGTTAGAGGCGAGTTCAAGCGAGTTTAACGTGAC 1331 Query 1164 -CTATAACTACCTTGATTGGTTGACCGTGCTGCCTTGGGGAAAATT-CAGTGATGAGAAT 1221 | |||||||||||||||||||||| | |||||||||| ||||| |||| |||| || Sbjct 1332 GC-GTAACTACCTTGATTGGTTGACCATATTGCCTTGGGG-AAATTACAGTAATGAAAAC 1389 Query 1222 TTTGATG-TCCTACGGGCAG-AAA-AGATTCTTGACGAGGATCATTACGGATTATCTGAT 1278 ||||||| | | |||||| | ||| | ||||||||||||||||| || || |||||||| Sbjct 1390 TTTGATGTTGC-ACGGGC-GCAAACA-ATTCTTGACGAGGATCACTATGGCTTATCTGAC 1446 Query 1279 GTAAAAGAAAGAATACTAGAGTTTATTGCTGTGGGAAGACTTAGAGGCACTTCACAAGGG 1338 ||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct 1447 GTAAAGGAAAGAATACTGGAATTTATTGCAGTGGGAAGACTTAGAGGCACTTCACAAGGG 1506 Query 1339 AAGATCATTTGTCTCTCTGGCCCACCTGGAGTAGGTAAAACTAGCATTGGGCGTTCCATT 1398 || ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| || ||| Sbjct 1507 AAAATCATCTGCCTCTCCGGCCCTCCTGGAGTAGGCAAAACTAGTATTGGGCGGTCTATT 1566 Query 1399 GCACGTGCTCTTGACCGCAAGTTCTTCCGGTTCTCTGTTGGAGGACTATCCGATGTTGCT 1458 |||||||||||| | ||||| || |||||||||||||||||||| || | ||||| ||| Sbjct 1567 GCACGTGCTCTTAATCGCAAATTTTTCCGGTTCTCTGTTGGAGGGTTAGCAGATGTCGCT 1626 Query 1459 GAGATTAAGGGGCATCGTCGAACATATATTGGTGCCATGCCTGGAAAGATGGTGCAATGT 1518 ||||| |||||||||||||| |||||| |||| |||||||| |||||||||||||||||| Sbjct 1627 GAGATCAAGGGGCATCGTCGGACATATGTTGGCGCCATGCCAGGAAAGATGGTGCAATGT 1686 Query 1519 CTAAAGAATGTGGGAACAGAAAATCCTCTTGTTCTGATCGATGAGATTGATAAGCTTGGA 1578 ||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||| ||| Sbjct 1687 CTAAAGAGTGTGGGGACAGCAAATCCTCTTGTTCTAATCGATGAGATTGATAAGC-TGG- 1744 Query 1579 GTTAG-GTGCCACGATGGCGACCCAGCCAGTGCAATGTTGGAGCTTTTGGATCCAGAGCA 1637 | || | |||| | ||| ||||| |||||||| ||||||||||| ||||||||||||| Sbjct 1745 G-GAGAG-GCCATGCTGGTGACCCGGCCAGTGCTTTGTTGGAGCTTCTGGATCCAGAGCA 1802 Query 1638 AAATGCAAACTTTCTAGACCACTATCTCAATGTTACTATTGACT-TATCCAAGGTTTTAT 1696 ||| ||||| ||||| |||||||||||| | |||||||| || | |||| |||||||||| Sbjct 1803 AAACGCAAATTTTCTGGACCACTATCTCGACGTTACTATAGA-TCTATCAAAGGTTTTAT 1861 Query 1697 TTGTATGCACAGCAAACGTGACAGATACCATTCCGAGTCCCCTGCTAGACAGAATGGAGG 1756 |||| ||||||||||| |||| ||| | ||||| | ||| |||||||||||||||||| Sbjct 1862 TTGTGTGCACAGCAAATGTGATAGACATGATTCCAAATCCTTTGCTAGACAGAATGGAGG 1921 Query 1757 TGATTACTCTCT-CAGGGTACATTACTGATGAGAAAA-TGCATATTGCTAGAGACTATTT 1814 ||||| || | | | ||||| || |||||||| |||| | ||||| || ||||||||||| Sbjct 1922 TGATTTCTAT-TGCTGGGTATATCACTGATGA-AAAAGTTCATATCGCAAGAGACTATTT 1979 Query 1815 GGTGAAAACTGCACGCAGAGATTGTGGCATTAAGCCTGAACAGGTTGATGTGAGCGATGC 1874 || ||||||||||| |||||||||| | ||||||||||||||||| ||||| ||||| Sbjct 1980 GGAAAAAACTGCACGTGGAGATTGTGGTGTCAAGCCTGAACAGGTTGAGGTGAGTGATGC 2039 Query 1875 AGCTCTTCTTTCCTTGATAGAAAATTACTGCAGAGAAGCAGGAGTTAGAAATCTCCAGAA 1934 ||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 2040 AGCGCTTCTTTCCTTGATAGAAAATTACTGCAGAGAAGCAGGTGTTAGGAATCTCCAGAA 2099 Query 1935 GCAGATAGAGAAGGTTTTTCGTAAGATTGCTCTTAAACTT-GTGCGCAAAGGGGCAGCAT 1993 ||||| |||||| ||| ||||||||||| |||||| || ||||| |||| |||| | Sbjct 2100 ACAGATCGAGAAGATTTACCGTAAGATTGCACTTAAA-TTAGTGCGTGAAGGAGCAG--T 2156 Query 1994 CAGCCGAAGTGCCTGCA 2010 | |||||| ||||||| Sbjct 2157 CC-CCGAAGAGCCTGCA 2172 Score = 479 bits (259), Expect = 7e-134 Identities = 427/509 (84%), Gaps = 8/509 (2%) Strand=Plus/Plus Query 213 CCTCGACGATTGTCTAACGGTTATAGCATTGCCATTGCCTCACAAGCCTCTTATTCCTGG 272 ||| || |||||| |||||||| |||||||||| |||| || | ||| ||| ||||||| Sbjct 415 CCT-GAAGATTGTTTAACGGTTCTAGCATTGCCGGTGCCACATAGGCCGCTTTTTCCTGG 473 Query 273 CTTTTACATGCCAATCTATGTCAAGGATCCTAAAGTTCTTGCAGCTTTACAAGAGAGCAG 332 ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct 474 TTTTTACATGCCAATCTATGTCAAGGATCCTAAAGTACTCGCAGCCTTACAAGAGAGCAG 533 Query 333 AAGACAACAAGCTTTATATGCGGGGGCTTTCCTTTTCAAGGATGACGCGTCAACTGACTC 392 ||||| ||||||| |||||| || ||||||||| | ||||||||| | ||| |||| || Sbjct 534 AAGACGACAAGCTCCATATGCAGGAGCTTTCCTTCTGAAGGATGACCCATCAGCTGATTC 593 Query 393 ATCTTCTAGCTCTGAAACTGAGAATATTC-TAGA-GAAGTTGAAAGGAAAAGAGTTGCTT 450 |||||| ||| |||| | || || | | || | || | ||||||| |||||||||||| Sbjct 594 ATCTTCAAGCACTGACGCAGAAAAAAA-CATAAATGA-GCTGAAAGGGAAAGAGTTGCTT 651 Query 451 TACCGGATTCATGAAGTTGGCACACTTGCTAAGATTTCAAGTATCCAAGGTGAGCAAGTC 510 ||||| |||| |||||||||||||||||| ||||||||||||||||||| || ||||| Sbjct 652 AACCGGCTTCACGAAGTTGGCACACTTGCTCAGATTTCAAGTATCCAAGGAGACCAAGTT 711 Query 511 ATCCTCATTGGCCGCAGACGACTTCGAATAACAGAGATGGTGAGTGAAGATCCTCTAACC 570 ||||| |||| | ||| |||||||| |||| |||||||||||| ||||| || || ||| Sbjct 712 ATCCTTGTTGGTCACAGGCGACTTCGCATAAAAGAGATGGTGAGCGAAGAACCACTTACC 771 Query 571 GTAAAAGTTGACCATCTAAAGGATAAGCCATATGACAAGGACGATGATGTCATCAAGGCA 630 || ||||| || ||||| |||||||| || | ||||| ||||||||||||| |||||||| Sbjct 772 GTCAAAGTCGATCATCTTAAGGATAATCCGTTTGACATGGACGATGATGTCGTCAAGGCA 831 Query 631 ACATACTTTC-AAGTTATGTCGACACTTAGGGATGTTTTAAAGACAACTTCACTCTGGAG 689 |||| |||| ||||||| || || ||||||||||| | ||||||| |||||| ||||| Sbjct 832 ACAT-CTTTTGAAGTTATTTCAACTCTTAGGGATGTACTGAAGACAAGTTCACTATGGAG 890 Query 690 AGATCAAGTTCGGACATATACCCAGGCAT 718 |||||| |||| ||||||||||||| ||| Sbjct 891 AGATCACGTTCAGACATATACCCAG-CAT 918 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 140266772628 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5