BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477907
Length=1207
Score E
Sequences producing significant alignments: (Bits) Value
AT3G06060.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1653 0.0
AT5G19200.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 654 0.0
> AT3G06060.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr3:1827980-1830200 REVERSE LENGTH=1337
Length=1337
Score = 1653 bits (895), Expect = 0.0
Identities = 1021/1082 (94%), Gaps = 8/1082 (1%)
Strand=Plus/Plus
Query 1 ACGGAGATTCACATCGCCGAGAGCTTTGTGACGAGATCAATGGCGGCCATTTCTACTTTC 60
|||||| ||||||||||||||||||| || |||||||| ||||||||||||||| || ||
Sbjct 2 ACGGAGCTTCACATCGCCGAGAGCTTCGTCACGAGATCCATGGCGGCCATTTCTCCTCTC 61
Query 61 TTCCTTCTCTTCCTCATTCCCATTGTCCCTCTCTCGATTCTCGCTATCTTAGCCCTAATC 120
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 62 TTCCTTCTCTTCCTCATTCCCATTATCCCACTATCGCTTCTCGCTATCTTAGCCCTAATT 121
Query 121 GTACGTCCTCGCCCCATTAAGATCCCTATCAAGTCCCGTCACGTCTTCATCACCGGTGGA 180
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 122 GTACGTCCTCGTCCCATTAAGATCCCTATCAAGTCCCGTCACGCCTTCATCACCGGTGGA 181
Query 181 TCTAGCGGCATCGGTCTTGCTCTCGCCCACCGCGCCGCTGCCGAGGGTGCTCGTGTCTCA 240
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 182 TCTAGCGGCATCGGTCTTGCTCTCGCCCACCGCGCCGCTTCCGAGGGCGCTCGTGTCTCA 241
Query 241 ATCCTCGCCCGATCCGCCGGAAAGCTAGAGGAAGCTAAAAAAGAGATCCAGCTGGCCACT 300
|||||||||||||||| |||||| ||||| ||||| ||| ||||||||| ||||||
Sbjct 242 ATCCTCGCCCGATCCGGATCAAAGCTCGAGGAGGCTAAGAAATCGATCCAGCTCGCCACT 301
Query 301 GGTGTCGTAGTCGCCACATTCTCCGCCGACGTTCGCGATTACGATGCAGTGTCGAAGGCG 360
||||||| ||||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 302 GGTGTCGAAGTCGCCACATTCTCTGCAGACGTTCGCGATTACGATGCAGTCTCGAAGGCG 361
Query 361 ATTGACGAATCTGGACCGATCGATGTGTTGATTGTTAATCAAGGTGTGTTTACGGCGAAG 420
|| || ||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 362 ATAGATGAATCGGGACCGATCGATGTGTTGATTGTTAACCAAGGTGTGTTTACGGCGAAG 421
Query 421 GAGCTGGTGAAACATAGTCCTGAGGATGTCAAATTCACGATTGACGTGAATCTTGTTGGG 480
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 422 GAGCTGGTGAAACATAGTCCTGAAGATGTCAAATTCACGATTGACGTAAATCTTGTTGGG 481
Query 481 AGCTTCAATGTGATTAAAGCCGCTTTGCCCGCCATGAAAGCAAGGAAAGATCGTGGACCT 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 482 AGCTTCAATGTGATTAAAGCCGCTTTGCCTGCCATGAAAGCAAGGAAAGATCGTGGACCT 541
Query 541 GCTTCCATCAGTCTCGTCTCCTCTCAAGCTGGTCAGGTGGGTGTCTATGGTTATGCTGCA 600
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 542 GCTTCCATCAGTCTCGTCTCCTCTCAAGCTGGTCAGGTTGGTGTCTATGGTTATGCTGCA 601
Query 601 TATTCAGCAAGCAAGTTTGGTCTTCAGGGTTTAGCACAAGCACTGCAACAAGAAGTTAT- 659
||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||
Sbjct 602 TATTCAGCAAGCAAGTTTGGTCTTCAGGGTTTAGCGCAAGCATTGCAACAGGAAGTTATA 661
Query 660 TGCTGATGACATTCATGTCACTCTTATTTTTCCTCCTGACACCAATACACCCGGCTTTGA 719
| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 662 T-CTGATGATATTCATGTCACTCTTATTTTTCCTCCTGACACTAATACACCCGGCTTTGA 720
Query 720 AGAAGAACAGAAGAGTAGACCTGAAGTCACTGCCATAATAGCTGCATCCTCTGGTTCAAT 779
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 AGAAGAACAGAAGAGCAGACCTGAAGTCACTGCCATAATAGCTGCATCCTCTGGTTCAAT 780
Query 780 GGAAACAGAAGAAGTAGCCAGAAAA-GCTATGGATGGCATAAAAGCAGGAAAGTTCACTG 838
||||||||||||||||| || |||| |||||||||||||||||||||||||| ||||| |
Sbjct 781 GGAAACAGAAGAAGTAG-CAAAAAAGGCTATGGATGGCATAAAAGCAGGAAACTTCACCG 839
Query 839 TCTCATGCAACTTTGAGGGATTCTTACTGTCTCTCGCGACAACCGGCATGTCCCCTCAAA 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 TCTCATGCAACTTTGAGGGATTCTTACTGTCTCTCGCGACAACCGGCATGTCCCCTCAAA 899
Query 899 GATCATTTTGGCTTGCATTTCTTGAAGTAATAACCGCAGGGCCTATAAGATTAATCGCTC 958
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 900 GATCATTTTGGCTTGCTTTTCTTGAAGTTATAACCGCAGGGCCTATAAGATTAATCGCTC 959
Query 959 TCTTCTTTCAATGGGATTGGTATAAAGCCATTGAAAAATGGAGCAAAACCAAAACCAAAT 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 TCTTCTTTCAATGGGATTGGTATAAAGCCATTGAAAAATGGAGCAAAACCAAAACCAAAT 1019
Query 1019 AGTACAGCCCGACAATGTTTCTTGAAGtttttttttGGCAGAAGCTGAAACATAGATGGG 1078
| ||||||||||||||| ||||||||| |||| |||||||||| |||||| ||||||
Sbjct 1020 -G-ACAGCCCGACAATGTATCTTGAAGTGCTTTT--GGCAGAAGCTTAAACATTGATGGG 1075
Query 1079 TA 1080
||
Sbjct 1076 TA 1077
> AT5G19200.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:6458953-6460856 FORWARD LENGTH=1204
Length=1204
Score = 654 bits (354), Expect = 0.0
Identities = 719/893 (81%), Gaps = 34/893 (4%)
Strand=Plus/Plus
Query 37 TCAATGGCGGCCATTTCTACTTTCTTCCTTCTCTTCCTCATTCCCATT-GTCCCTCTCTC 95
||||||||||| |||| | || |||||| | | ||| |||||| | || | | ||||||
Sbjct 40 TCAATGGCGGCAATTTTTTCTCTCTTCC-T-T-TTCTTCATTCTC-TTCAT-CGTCTCTC 94
Query 96 GATTCTCGCT-ATCTTAGCCCTAATCGTACGTCCTCGCCCCATTAAGATCCCTATCAAGT 154
||||| | |||||| | | |||||||| || | || | | |||||| |||||||
Sbjct 95 --TTCTC-ATCATCTTATCTTTCATCGTACGGCCAAGATCCGTCACGATCCCCATCAAGT 151
Query 155 CCCGTCACGTCTTCATCACCGGTGGATCTAGCGGCATCGGTCTTGCTCTCGCCCACCGCG 214
|| ||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| |
Sbjct 152 TTCGCCACGTCTTCATCACCGGTGGATCAAGCGGAATCGGTCTCGCTCTCGCTCACCGTG 211
Query 215 CCG-CTGCCGAGGGTGCTCGTGTCTCAATCCTCGCCCGATCCGCCGGAAAGCTAGAGGAA 273
||| || |||| || ||| ||||| |||||||| || || | | |||||| | |||
Sbjct 212 CCGTCT-CCGAAGGCGCTAAAGTCTCCATCCTCGCTCGTTCAACTGAAAAGCTCGCCGAA 270
Query 274 GCTAAAAAAGAGATCCAGCTGGCCACTGGTGTCGTA-GTCGCCACATTCTCCGCCGACGT 332
|| ||| | |||||||| || || ||||||| | |||||||| ||||| || |||||
Sbjct 271 GCCAAACGATCCATCCAGCTAGCTACCGGTGTCG-AGGTCGCCACGTTCTCTGCGGACGT 329
Query 333 TCGCGATTACGATGCAGTGTCGAAGGCGATTGACGAATCTGGACCGATCGATGTGTTGAT 392
|||||||||||| || || ||||| |||||||| ||||| ||||||||||||||||||||
Sbjct 330 TCGCGATTACGACGCCGTTTCGAAAGCGATTGATGAATCGGGACCGATCGATGTGTTGAT 389
Query 393 TGTTAATCAAGGTGTGTTTAC-GGCGAAGGAGCTGGTGAAACATAGTCCTGAGGATGTCA 451
|||||||||||| ||||||| || ||| ||||| | |||||| ||||||||||| || |
Sbjct 390 TGTTAATCAAGGCGTGTTTATTGG-GAAAGAGCTTGAGAAACAGAGTCCTGAGGAGGTTA 448
Query 452 AATTCACGATTGACGTGAATCTTGT-TGGGAGCTTCAATGTGATTAAAGCCGCTTTGCCC 510
| || | |||||| |||||||| | ||||||||||||||||||||| || ||||| ||
Sbjct 449 AGTTTATGATTGATGTGAATCT-GACTGGGAGCTTCAATGTGATTAAGGCGGCTTTACCT 507
Query 511 GCCATGAAAGCAAGGAAAGATCGTGGACCTGCTTCCATCAGTCTCGTCTCCTCTCAAGCT 570
|| |||||||| ||| ||| |||||| ||||||||||| ||| || ||||||||||||
Sbjct 508 GCTATGAAAGCTAGGGAAGGTCGTGGTCCTGCTTCCATTTCTCTTGTGTCCTCTCAAGCT 567
Query 571 GGTCAGGTGGGTGTCTATGGTTATGCTGCATATTCAGCAAGCAAGTTTGGTCTTCAGGGT 630
||||||| ||| | |||||||| ||||||||||||| ||||||||||| |||||||||
Sbjct 568 GGTCAGGCAGGTATATATGGTTACACTGCATATTCAGCGAGCAAGTTTGGGCTTCAGGGT 627
Query 631 TTAGCACAAGCACTGCAACAAGAAGTTATTGCTGATGACATTCATGTCACTCTTATT-TT 689
||||| |||||| |||| |||||||||||| |||||| ||||||||| ||||| || ||
Sbjct 628 TTAGCGCAAGCATTGCAGCAAGAAGTTATTTCTGATGGCATTCATGTGACTCTC-TTGTT 686
Query 690 TCCTCCTGACACCAATACACCCGGCTTTGAAGAAGAACAGAAGA-GTAGACCTGAAG-TC 747
|||||||||||| |||||||||| |||||| |||||| ||||| | || || || | |
Sbjct 687 TCCTCCTGACACTGATACACCCGGGTTTGAACAAGAACTGAAGAAG-AGGCCAGA-GCTA 744
Query 748 ACTGCCATAATAGCTGCATCCTCTGGTTCAATGGAAACAGAA-GAAGTAGCCAGAAA-A- 804
||| | || ||||| ||||| ||||| |||||| |||| || |||||||||| ||| |
Sbjct 745 ACTTCAATCATAGCCGCATCATCTGGCTCAATGAAAACC-AATGAAGTAGCCA-AAATAT 802
Query 805 GCTATGGATGGCATAAAAGCAGGAAAGTTCACTGTCTCATGCAACTTTGAG-GGATTCTT 863
| | || |||| || ||||||||||| ||||| || ||||| | ||| | || |||||
Sbjct 803 GTTTTG-ATGGTATCAAAGCAGGAAAATTCACAGTGACATGCCATTTT-ATTGGCTTCTT 860
Query 864 ACTGTCTCTCGCGA-CAACCGGCATGTCCCCTCAAAGATCATTTTGGCTTGCA 915
||| ||| | || | || |||||||||||||||| |||| ||||||||||||
Sbjct 861 ACTATCTATTGCTAGCA-CCGGCATGTCCCCTCAGGGATCTTTTTGGCTTGCA 912
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59286843645
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5